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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CD74 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2842.9
Number of samples
349
Samples
Sample
Description
TPM
TCGA-20-1687-01A
46 years, female, white, stage:Stage IV, alive, 81 days
15588.9
TCGA-29-1785-01A
55 years, female, white, stage:Stage IIIC, dead, 1104 days
11605.3
TCGA-31-1953-01A
52 years, female, asian, stage:Stage IIIC, alive, 204 days
11379.7
TCGA-29-1694-01A
45 years, female, white, stage:Stage IIIC, dead, 1187 days
10464.2
TCGA-20-0987-01A
61 years, female, white, stage:Stage IIIC, dead, 701 days
10289.4
TCGA-29-1710-01A
54 years, female, white, stage:Stage IIIC, dead, 951 days
9757.1
TCGA-24-1551-01A
53 years, female, white, stage:Stage IIIC, dead, 1579 days
9705.6
TCGA-29-2427-01A
60 years, female, white, stage:Stage IIIC, alive, 1900 days
9627.1
TCGA-23-1023-01A
65 years, female, white, stage:Stage IIIC, alive, 1233 days
9297.9
TCGA-31-1956-01A
60 years, female, white, stage:Stage IIIB, alive, 1342 days
9251.0
TCGA-61-2002-01A
46 years, female, white, stage:Stage IIIC, alive, 547 days
9120.4
TCGA-31-1950-01A
76 years, female, white, stage:Stage IIIC, alive, 571 days
9016.2
TCGA-24-1847-01A
45 years, female, white, stage:Stage IV, alive, 343 days
8890.3
TCGA-04-1648-01A
57 years, female, white, stage:Stage IIIC, dead, 871 days
8740.4
TCGA-57-1584-01A
47 years, female, white, stage:Stage IIIC, alive, 643 days
8492.2
TCGA-61-2000-01A
67 years, female, white, stage:Stage IIIC, alive, 441 days
8314.4
TCGA-20-0991-01A
78 years, female, white, stage:Stage IIB, alive, 797 days
7437.5
TCGA-13-0795-01A
66 years, female, white, stage:Stage IIIC, dead, 619 days
7417.4
TCGA-30-1860-01A
58 years, female, white, stage:Stage IIIC, dead, 1366 days
7226.5
TCGA-24-1565-01A
74 years, female, white, stage:Stage IIIC, dead, 312 days
7147.4
TCGA-24-1428-01A
50 years, female, white, stage:Stage IIIC, alive, 529 days
7133.5
TCGA-24-1553-01A
53 years, female, white, stage:Stage IIIB, dead, 1767 days
6875.7
TCGA-36-1569-01A
52 years, female, white, stage:Stage IIIC, alive, 885 days
6763.3
TCGA-09-0366-01A
55 years, female, white, stage:Stage IIIC, dead, 1757 days
6585.0
TCGA-24-1549-01A
58 years, female, white, stage:Stage IIIB, dead, 1721 days
6567.8
TCGA-31-1946-01A
30 years, female, stage:Stage IIIC, alive, 918 days
6463.5
TCGA-30-1857-01A
64 years, female, white, stage:Stage IV, dead, 8 days
6410.5
TCGA-24-1563-01A
66 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
6329.6
TCGA-04-1361-01A
57 years, female, white, stage:Stage IIIB, alive, 989 days
6311.5
TCGA-13-0768-01A
73 years, female, white, stage:Stage IIIC, dead, 1784 days
6061.2
TCGA-24-1842-01A
49 years, female, white, stage:Stage IIIC, alive, 253 days
6013.2
TCGA-23-1120-01A
60 years, female, white, stage:Stage IIIC, alive, 130 days
5891.3
TCGA-29-1690-01A
66 years, female, white, stage:Stage IIIC, dead, 1448 days
5792.4
TCGA-24-1435-01A
57 years, female, white, stage:Stage IIIC, dead, 1324 days
5706.5
TCGA-29-1696-01A
43 years, female, white, stage:Stage IIIC, dead, 1032 days
5608.9
TCGA-13-0804-01A
73 years, female, white, stage:Stage IIIC, dead, 1073 days
5604.5
TCGA-25-1870-01A
59 years, female, white, stage:Stage IIIC, dead, 455 days
5565.6
TCGA-13-0916-01A
49 years, female, white, stage:Stage IIIC, alive, 1785 days
5414.6
TCGA-13-1498-01A
73 years, female, white, stage:Stage IIIC, dead, 2012 days
5322.2
TCGA-57-1994-01A
63 years, female, white, stage:'--, alive, 761 days
5319.3
TCGA-61-1738-01A
60 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
5298.1
TCGA-13-0885-01A
70 years, female, white, stage:Stage IIIC, alive, 3388 days
5281.9
TCGA-36-1581-01A
63 years, female, white, stage:Stage IIC, alive, 751 days
5260.8
TCGA-24-2024-01A
72 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
5239.6
TCGA-13-0765-01A
50 years, female, white, stage:Stage IIIC, dead, 1389 days
5146.2
TCGA-04-1365-01A
87 years, female, white, stage:Stage IIIB, alive, 947 days
5047.8
TCGA-13-1483-01A
61 years, female, white, stage:Stage IIIC, dead, 895 days
5023.1
TCGA-57-1585-01A
57 years, female, white, stage:Stage IIIC, dead, 53 days
5011.4
TCGA-24-0979-01A
53 years, female, white, stage:Stage IV, dead, 1264 days
4988.2
TCGA-25-2392-01A
75 years, female, white, stage:Stage IV, dead, 31 days
4963.8
TCGA-25-2401-01A
64 years, female, white, stage:Stage IIIC, dead, 90 days
4958.3
TCGA-09-2051-01A
42 years, female, white, stage:Stage IIIC, alive, 1919 days
4953.0
TCGA-25-2399-01A
80 years, female, white, stage:Stage IIIC, dead, 608 days
4925.9
TCGA-13-0797-01A
49 years, female, white, stage:Stage IIIC, alive, 2121 days
4923.3
TCGA-59-2354-01A
63 years, female, white, stage:Stage IIIC, dead, 1046 days
4919.7
TCGA-29-1784-01A
55 years, female, white, stage:Stage IIIC, alive, 163 days
4917.3
TCGA-61-1918-01A
45 years, female, white, stage:Stage IV, dead, 479 days
4911.9
TCGA-25-1635-01A
71 years, female, white, stage:Stage IIIC, dead, 1583 days
4721.7
TCGA-36-1570-01A
49 years, female, white, stage:Stage IIIC, alive, 655 days
4711.3
TCGA-24-2267-01A
58 years, female, white, stage:Stage IIB, dead, 1446 days
4691.1
TCGA-24-2298-01A
55 years, female, white, stage:Stage IIIC, dead, 1620 days
4656.8
TCGA-24-1434-01A
59 years, female, white, stage:Stage IIIC, dead, 568 days
4649.1
TCGA-24-2261-01A
76 years, female, white, stage:Stage IIIC, dead, 24 days
4648.2
TCGA-09-0367-01A
67 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
4586.1
TCGA-13-0897-01A
54 years, female, white, stage:Stage IIIC, dead, 2182 days
4487.9
TCGA-24-1846-01A
45 years, female, stage:Stage IIIC, alive, 133 days
4475.9
TCGA-24-1930-01A
53 years, female, white, stage:Stage IIIC, dead, 2467 days
4422.7
TCGA-24-1546-01A
46 years, female, white, stage:Stage IIIC, dead, 1955 days
4402.7
TCGA-13-1511-01A
52 years, female, asian, stage:Stage IV, dead, 1650 days
4355.4
TCGA-61-1911-01A
55 years, female, white, stage:Stage IIA, alive, 1293 days
4314.5
TCGA-23-1027-01A
48 years, female, white, stage:Stage IIIC, dead, 976 days
4289.6
TCGA-13-1510-01A
62 years, female, white, stage:Stage IIIC, dead, 1359 days
4219.3
TCGA-13-1488-01A
59 years, female, white, stage:Stage IV, dead, 2154 days
4201.4
TCGA-36-1568-01A
52 years, female, stage:Stage IIIC, alive, 875 days
4095.6
TCGA-29-1768-01A
50 years, female, white, stage:Stage IV, dead, 952 days
4091.6
TCGA-24-2281-01A
68 years, female, white, stage:Stage IIA, alive, 1357 days
4059.6
TCGA-10-0937-01A
44 years, female, white, stage:Stage IIIC, dead, 608 days
4023.5
TCGA-24-1603-01A
53 years, female, white, stage:Stage IIIB, dead, 2742 days
3988.0
TCGA-23-1118-01A
45 years, female, white, stage:Stage IIIC, alive, 2616 days
3981.5
TCGA-25-1319-01A
73 years, female, white, stage:Stage IIIC, dead, 1977 days
3937.8
TCGA-13-1411-01A
81 years, female, white, stage:Stage IIIC, dead, 531 days
3921.9
TCGA-24-1924-01A
65 years, female, white, stage:Stage IIIC, dead, 919 days
3897.7
TCGA-13-0911-01A
55 years, female, white, stage:Stage IV, dead, 1355 days
3868.2
TCGA-13-0886-01A
67 years, female, white, stage:Stage IIIC, alive, 4665 days
3858.9
TCGA-09-1662-01A
58 years, female, white, stage:Stage IV, dead, 2717 days
3831.1
TCGA-29-1711-01A
45 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
3785.4
TCGA-24-1417-01A
54 years, female, white, stage:Stage IV, alive, 238 days
3782.3
TCGA-24-0968-01A
59 years, female, white, stage:Stage IIIC, dead, 598 days
3774.9
TCGA-61-1907-01A
63 years, female, white, stage:Stage IIIC, alive, 952 days
3736.5
TCGA-25-2409-01A
71 years, female, white, stage:Stage IV, dead, 821 days
3735.3
TCGA-04-1651-01A
53 years, female, white, stage:Stage IIIC, dead, 1102 days
3720.1
TCGA-23-2077-01A
45 years, female, white, stage:Stage IIIC, alive, 3525 days
3705.9
TCGA-31-1951-01A
58 years, female, white, stage:Stage IIIC, alive, 684 days
3694.8
TCGA-61-1995-01A
43 years, female, white, stage:Stage IIIC, alive, 61 days
3673.2
TCGA-25-1628-01A
67 years, female, white, stage:Stage IIIC, dead, 627 days
3661.5
TCGA-36-1576-01A
76 years, female, stage:Stage IIIC, alive, 915 days
3573.3
TCGA-24-1413-01A
51 years, female, white, stage:Stage IIIC, alive, 192 days
3563.8
TCGA-25-1318-01A
54 years, female, white, stage:Stage IIIC, dead, 1064 days
3492.5
TCGA-23-1028-01A
43 years, female, white, stage:Stage IIIC, alive, 1503 days
3459.9
TCGA-13-0924-01A
45 years, female, white, stage:Stage IV, alive, 2614 days
3410.8
TCGA-29-1693-01A
72 years, female, white, stage:Stage IIIC, alive, 3096 days
3383.3
TCGA-13-0725-01A
44 years, female, white, stage:Stage IIIC, dead, 377 days
3370.0
TCGA-24-1562-01A
67 years, female, white, stage:Stage IIIC, dead, 1384 days
3338.5
TCGA-24-1425-01A
45 years, female, white, stage:Stage IIIC, alive, 181 days
3326.4
TCGA-13-1499-01A
56 years, female, white, stage:Stage IIIC, alive, 3500 days
3303.8
TCGA-24-1422-01A
82 years, female, black or african american, stage:Stage IIIC, dead, 23 days
3302.9
TCGA-09-1670-01A
57 years, female, white, stage:Stage IIIA, alive, 547 days
3276.1
TCGA-29-1705-01A
47 years, female, white, stage:Stage IIIC, dead, 555 days
3231.3
TCGA-24-2271-01A
55 years, female, asian, stage:Stage IIIC, dead, 962 days
3229.5
TCGA-61-2003-01A
53 years, female, white, stage:Stage IIIC, alive, 122 days
3215.6
TCGA-24-1104-01A
56 years, female, white, stage:Stage IV, dead, 1933 days
3201.9
TCGA-24-0966-01A
78 years, female, black or african american, stage:Stage IIIC, alive, 232 days
3192.7
TCGA-61-2109-01A
40 years, female, white, stage:Stage IIIC, dead, 629 days
3174.2
TCGA-36-1580-01A
82 years, female, stage:Stage IIIC, dead, 737 days
3144.6
TCGA-25-1313-01A
62 years, female, white, stage:Stage IV, dead, 820 days
3142.9
TCGA-29-1688-01A
39 years, female, white, stage:Stage IIIC, dead, 2400 days
3113.8
TCGA-24-2289-01A
68 years, female, white, stage:Stage IV, dead, 2049 days
3107.5
TCGA-24-1103-01A
50 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
3106.0
TCGA-31-1959-01A
49 years, female, white, stage:Stage IV, alive, 67 days
3091.0
TCGA-36-1574-01A
48 years, female, asian, stage:Stage IIIC, alive, 686 days
3081.9
TCGA-13-1404-01A
48 years, female, white, stage:Stage IIIC, alive, 2469 days
3076.1
TCGA-13-1496-01A
65 years, female, white, stage:Stage IIIC, dead, 129 days
3062.4
TCGA-25-1626-01A
65 years, female, white, stage:Stage IIIC, dead, 518 days
3042.7
TCGA-29-1703-01A
56 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
3007.0
TCGA-09-1666-01A
57 years, female, white, stage:Stage IIIC, alive, 1752 days
2995.7
TCGA-29-1691-01A
51 years, female, white, stage:Stage IIIC, dead, 1470 days
2995.3
TCGA-24-1616-01A
56 years, female, white, stage:Stage IIIC, dead, 1163 days
2966.6
TCGA-24-1423-01A
61 years, female, white, stage:Stage IIIC, alive, 190 days
2950.8
TCGA-13-2060-01A
51 years, female, white, stage:Stage IV, alive, 2369 days
2936.8
TCGA-24-2293-01A
47 years, female, white, stage:'--, dead, 506 days
2936.5
TCGA-61-2104-01A
53 years, female, white, stage:Stage IIC, alive, 2338 days
2933.7
TCGA-61-1725-01A
40 years, female, white, stage:Stage IIIC, alive, 956 days
2924.7
TCGA-24-2035-01A
65 years, female, white, stage:Stage IIIC, dead, 857 days
2919.5
TCGA-29-1783-01A
58 years, female, white, stage:Stage IIIC, alive, 220 days
2907.5
TCGA-13-0887-01A
42 years, female, white, stage:Stage IIIC, dead, 2028 days
2901.1
TCGA-23-1123-01A
59 years, female, white, stage:Stage IIIC, dead, 1018 days
2899.9
TCGA-29-1763-01A
43 years, female, black or african american, stage:Stage IIC, alive, 2032 days
2882.9
TCGA-29-1776-01A
63 years, female, black or african american, stage:Stage IIIC, alive, 360 days
2869.9
TCGA-24-1604-01A
66 years, female, white, stage:Stage IIIC, dead, 2688 days
2854.3
TCGA-13-1495-01A
60 years, female, white, stage:Stage IIIC, dead, 2749 days
2824.7
TCGA-25-1631-01A
73 years, female, white, stage:Stage IIIC, dead, 9 days
2811.0
TCGA-13-0923-01A
74 years, female, white, stage:Stage IIIC, alive, 2547 days
2803.4
TCGA-25-1633-01A
64 years, female, white, stage:Stage IIIC, dead, 1891 days
2785.7
TCGA-04-1343-01A
72 years, female, white, stage:Stage IV, dead, 361 days
2774.9
TCGA-24-1416-01A
34 years, female, white, stage:Stage IV, alive, 194 days
2769.5
TCGA-24-2297-01A
56 years, female, white, stage:Stage IIIC, dead, 1699 days
2768.8
TCGA-61-2008-01A
40 years, female, asian, stage:Stage IIC, alive, 932 days
2765.9
TCGA-13-0726-01A
55 years, female, white, stage:Stage IIIC, dead, 949 days
2759.7
TCGA-61-1919-01A
58 years, female, white, stage:Stage IIIC, dead, 1161 days
2759.4
TCGA-25-1623-01A
71 years, female, white, stage:Stage IV, dead, 565 days
2745.8
TCGA-04-1542-01A
52 years, female, white, stage:Stage IIIB, dead, 2561 days
2733.2
TCGA-29-1761-01A
80 years, female, asian, stage:Stage IIIC, dead, 528 days
2654.0
TCGA-24-1427-01A
58 years, female, stage:Stage IIIC, alive, 147 days
2627.0
TCGA-25-1326-01A
61 years, female, white, stage:Stage IIIC, dead, 1249 days
2624.7
TCGA-24-2038-01A
68 years, female, white, stage:Stage IIIA, dead, 1354 days
2623.1
TCGA-25-2042-01A
60 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
2621.3
TCGA-04-1530-01A
68 years, female, white, stage:Stage IIIC, dead, 3622 days
2612.0
TCGA-24-1474-01A
57 years, female, black or african american, stage:Stage IIIC, dead, 676 days
2596.9
TCGA-29-2428-01A
58 years, female, white, stage:Stage IIIC, alive, 1372 days
2594.1
TCGA-61-1728-01A
59 years, female, white, stage:Stage IV, alive, 848 days
2582.0
TCGA-25-1328-01A
38 years, female, white, stage:Stage IIIC, dead, 2009 days
2582.0
TCGA-13-0891-01A
73 years, female, white, stage:Stage IV, dead, 3128 days
2533.9
TCGA-24-2290-01A
56 years, female, white, stage:Stage IIIC, dead, 1102 days
2518.7
TCGA-29-1781-01A
69 years, female, white, stage:Stage IIIC, alive, 255 days
2517.2
TCGA-59-2351-01A
51 years, female, white, stage:Stage IIIC, alive, 3532 days
2486.5
TCGA-25-1320-01A
65 years, female, white, stage:Stage IIIC, dead, 1155 days
2479.8
TCGA-13-1403-01A
48 years, female, white, stage:Stage IIIC, dead, 2345 days
2438.1
TCGA-23-2084-01A
45 years, female, white, stage:Stage IV, dead, 1516 days
2414.1
TCGA-59-2352-01A
78 years, female, white, stage:Stage IIIC, dead, 286 days
2397.2
TCGA-59-2350-01A
44 years, female, stage:Stage IV, dead, 679 days
2385.0
TCGA-20-1682-01A
56 years, female, white, stage:Stage IIIC, alive, 837 days
2375.4
TCGA-29-1777-01A
47 years, female, white, stage:Stage IIIC, alive, 374 days
2371.9
TCGA-25-1312-01A
69 years, female, white, stage:Stage IV, dead, 31 days
2361.5
TCGA-24-2033-01A
87 years, female, white, stage:Stage IIIC, dead, 562 days
2343.2
TCGA-29-1695-01A
62 years, female, white, stage:Stage IIIC, dead, 1229 days
2316.7
TCGA-13-1507-01A
77 years, female, white, stage:Stage IIIC, dead, 1993 days
2307.7
TCGA-61-2097-01A
71 years, female, white, stage:Stage IIC, alive, 1844 days
2275.6
TCGA-24-2254-01A
66 years, female, white, stage:Stage IIIC, dead, 1736 days
2274.5
TCGA-31-1944-01A
47 years, female, white, stage:Stage IIIC, alive, 1386 days
2268.3
TCGA-25-1316-01A
55 years, female, white, stage:Stage IIIC, dead, 1279 days
2260.8
TCGA-24-1923-01A
51 years, female, white, stage:Stage IIIC, dead, 690 days
2248.1
TCGA-10-0928-01A
71 years, female, white, stage:Stage IIIC, dead, 563 days
2212.8
TCGA-61-1737-01A
42 years, female, white, stage:Stage IV, alive, 1364 days
2197.1
TCGA-61-1741-01A
76 years, female, white, stage:Stage IIIB, dead, 1024 days
2193.6
TCGA-23-1109-01A
62 years, female, white, stage:Stage IIIC, dead, 1562 days
2187.1
TCGA-61-2012-01A
81 years, female, white, stage:Stage IIC, alive, 932 days
2178.3
TCGA-04-1519-01A
48 years, female, stage:Stage IIIC, alive, 24 days
2177.9
TCGA-24-2288-01A
70 years, female, white, stage:Stage IIIC, dead, 25 days
2171.0
TCGA-57-1586-01A
66 years, female, white, stage:Stage IIIC, alive, 679 days
2108.3
TCGA-04-1536-01A
60 years, female, black or african american, stage:Stage IV, dead, 885 days
2105.7
TCGA-61-2113-01A
53 years, female, white, stage:Stage IIC, dead, 676 days
2103.9
TCGA-61-2009-01A
65 years, female, white, stage:Stage IIIC, alive, 1212 days
2082.8
TCGA-24-1471-01A
60 years, female, white, stage:Stage IIIC, alive, 36 days
2074.5
TCGA-59-2355-01A
58 years, female, white, stage:Stage IV, dead, 65 days
2069.1
TCGA-24-1560-01A
51 years, female, white, stage:Stage IIIC, dead, 1341 days
2062.1
TCGA-13-0720-01A
48 years, female, white, stage:Stage IIIC, dead, 1355 days
2037.1
TCGA-10-0931-01A
44 years, female, white, stage:Stage IIIC, dead, 1000 days
2031.8
TCGA-13-0883-01A
61 years, female, white, stage:Stage IIIC, dead, 2097 days
2027.4
TCGA-25-2396-01A
71 years, female, white, stage:Stage IIIC, dead, 92 days
2027.1
TCGA-23-1119-01A
64 years, female, white, stage:Stage IIIC, alive, 3953 days
2026.9
TCGA-24-1469-01A
71 years, female, white, stage:Stage IIIC, alive, 277 days
2018.2
TCGA-29-1770-01A
54 years, female, white, stage:Stage IIIC, alive, 741 days
1909.6
TCGA-13-1405-01A
49 years, female, white, stage:Stage IV, dead, 868 days
1898.5
TCGA-25-2404-01A
38 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1897.3
TCGA-61-2101-01A
55 years, female, white, stage:Stage IIIC, dead, 1688 days
1868.8
TCGA-24-2023-01A
54 years, female, white, stage:Stage IIIA, dead, 1364 days
1868.2
TCGA-29-1778-01A
77 years, female, white, stage:Stage IIIC, alive, 454 days
1864.3
TCGA-25-2398-01A
71 years, female, white, stage:Stage IIIC, dead, 1369 days
1860.2
TCGA-23-1116-01A
83 years, female, white, stage:Stage IIIC, dead, 592 days
1840.6
TCGA-24-1843-01A
66 years, female, white, stage:Stage IIIC, alive, 106 days
1838.5
TCGA-13-1485-01A
48 years, female, white, stage:Stage IV, dead, 629 days
1820.2
TCGA-24-2026-01A
79 years, female, white, stage:Stage IIIC, dead, 1059 days
1805.6
TCGA-24-1431-01A
67 years, female, white, stage:Stage IIIC, dead, 583 days
1790.6
TCGA-61-1724-01A
47 years, female, white, stage:Stage IIIC, dead, 637 days
1789.2
TCGA-13-1506-01A
45 years, female, white, stage:Stage IIIC, dead, 1039 days
1778.6
TCGA-24-1418-01A
68 years, female, white, stage:Stage IIIC, alive, 243 days
1776.2
TCGA-30-1718-01A
44 years, female, white, stage:Stage IIIC, dead, 1579 days
1772.9
TCGA-30-1891-01A
61 years, female, white, stage:Stage IIIC, dead, 914 days
1761.9
TCGA-09-2045-01A
50 years, female, asian, stage:Stage IV, dead, 1069 days
1752.2
TCGA-23-2078-01A
66 years, female, white, stage:Stage IIIC, alive, 2661 days
1729.9
TCGA-24-1845-01A
42 years, female, white, stage:Stage IIIC, alive, 116 days
1720.7
TCGA-04-1362-01A
59 years, female, white, stage:Stage IIC, dead, 1348 days
1699.6
TCGA-24-1105-01A
36 years, female, white, stage:Stage IIIC, dead, 1442 days
1694.5
TCGA-57-1583-01A
57 years, female, black or african american, stage:Stage IIIC, dead, 346 days
1659.2
TCGA-23-1107-01A
59 years, female, white, stage:Stage IV, dead, 9 days
1653.2
TCGA-25-1627-01A
73 years, female, white, stage:Stage IIIC, dead, 394 days
1648.1
TCGA-61-1914-01A
65 years, female, stage:Stage IIIC, alive, 1722 days
1645.2
TCGA-24-1850-01A
72 years, female, white, stage:Stage IIIC, alive, 168 days
1642.2
TCGA-24-1464-01A
70 years, female, white, stage:Stage IIIC, dead, 379 days
1640.8
TCGA-57-1993-01A
56 years, female, white, stage:Stage IIIC, alive, 763 days
1626.9
TCGA-24-1928-01A
77 years, female, white, stage:Stage IIIC, dead, 336 days
1588.0
TCGA-13-0766-01A
42 years, female, white, stage:Stage IIIC, dead, 1725 days
1581.9
TCGA-10-0927-01A
65 years, female, stage:Stage IIIC, dead, 2490 days
1563.1
TCGA-04-1332-01A
70 years, female, white, stage:Stage IIIC, dead, 1247 days
1555.5
TCGA-29-2414-01A
75 years, female, white, stage:Stage IIIC, dead, 2621 days
1540.7
TCGA-09-1669-01A
54 years, female, white, stage:Stage IIIA, alive, 928 days
1531.8
TCGA-30-1862-01A
65 years, female, white, stage:Stage IV, dead, 186 days
1519.1
TCGA-24-1550-01A
49 years, female, white, stage:Stage IIIC, dead, 1249 days
1508.8
TCGA-61-2111-01A
61 years, female, white, stage:Stage IV, alive, 3825 days
1494.5
TCGA-13-1505-01A
63 years, female, white, stage:Stage IIIC, alive, 1998 days
1491.7
TCGA-13-0727-01A
71 years, female, white, stage:Stage IIIC, dead, 462 days
1485.4
TCGA-25-1630-01A
73 years, female, white, stage:Stage IIIC, dead, 1162 days
1463.4
TCGA-30-1866-01A
61 years, female, white, stage:Stage IV, dead, 1114 days
1451.8
TCGA-23-1030-01A
64 years, female, white, stage:Stage IIIC, alive, 886 days
1440.5
TCGA-09-1673-01A
50 years, female, white, stage:Stage IV, alive, 92 days
1439.1
TCGA-13-1410-01A
57 years, female, white, stage:Stage IV, alive, 2464 days
1436.8
TCGA-13-0714-01A
55 years, female, white, stage:Stage IV, dead, 189 days
1403.3
TCGA-25-1321-01A
65 years, female, white, stage:Stage IIIC, dead, 1033 days
1397.5
TCGA-59-2348-01A
59 years, female, white, stage:Stage IIIC, alive, 5481 days
1374.3
TCGA-24-1557-01A
49 years, female, white, stage:Stage IIIC, dead, 1213 days
1367.9
TCGA-61-2110-01A
56 years, female, white, stage:Stage IIIC, dead, 1354 days
1341.2
TCGA-25-1329-01A
76 years, female, white, stage:Stage IIIC, dead, 457 days
1329.2
TCGA-25-1322-01A
62 years, female, white, stage:Stage IV, dead, 91 days
1309.0
TCGA-23-1122-01A
53 years, female, white, stage:Stage IIIC, dead, 1189 days
1308.7
TCGA-61-1733-01A
71 years, female, white, stage:Stage IIIC, alive, 967 days
1308.4
TCGA-13-A5FT-01A
67 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
1299.6
TCGA-29-1769-01A
40 years, female, white, stage:Stage IIIC, alive, 699 days
1241.6
TCGA-24-1844-01A
64 years, female, white, stage:Stage IIIC, alive, 113 days
1225.2
TCGA-04-1655-01A
49 years, female, white, stage:Stage IIIB, dead, 1380 days
1222.7
TCGA-61-1721-01A
38 years, female, white, stage:Stage IV, alive, 338 days
1207.5
TCGA-29-1701-01A
56 years, female, white, stage:Stage IIIC, dead, 515 days
1190.1
TCGA-13-1408-01A
59 years, female, white, stage:Stage IIIC, dead, 1680 days
1188.0
TCGA-61-2092-01A
57 years, female, white, stage:Stage IIIC, alive, 1573 days
1185.4
TCGA-25-2400-01A
76 years, female, white, stage:Stage IIIC, dead, 1278 days
1184.8
TCGA-24-1558-01A
73 years, female, white, stage:Stage IIIC, dead, 594 days
1178.5
TCGA-13-1512-01A
49 years, female, white, stage:Stage IIIC, alive, 442 days
1168.7
TCGA-13-1487-01A
74 years, female, white, stage:Stage IV, dead, 681 days
1161.3
TCGA-04-1338-01A
78 years, female, white, stage:Stage IIIC, alive, 1418 days
1157.5
TCGA-30-1853-01A
58 years, female, white, stage:Stage IIIC, dead, 1103 days
1145.0
TCGA-13-1409-01A
73 years, female, white, stage:Stage IIIC, dead, 1742 days
1144.1
TCGA-29-1766-01A
74 years, female, white, stage:Stage IIIC, dead, 1199 days
1139.2
TCGA-20-1683-01A
65 years, female, white, stage:Stage IIIC, alive, 772 days
1132.1
TCGA-61-1998-01A
48 years, female, white, stage:Stage IIIC, alive, 168 days
1128.4
TCGA-24-2280-01A
74 years, female, white, stage:Stage IIIC, alive, 2143 days
1093.0
TCGA-13-0730-01A
71 years, female, white, stage:Stage IIIC, dead, 542 days
1081.2
TCGA-13-0724-01A
72 years, female, white, stage:Stage IV, dead, 83 days
1064.0
TCGA-23-1111-01A
63 years, female, white, stage:Stage IIIC, alive, 98 days
1062.8
TCGA-24-2036-01A
50 years, female, white, stage:Stage IIIA, dead, 1947 days
1036.1
TCGA-VG-A8LO-01A
55 years, female, black or african american, stage:Stage IV, dead, 24 days
1030.9
TCGA-23-1024-01A
52 years, female, white, stage:Stage IV, alive, 468 days
1015.7
TCGA-13-1509-01A
64 years, female, white, stage:Stage IV, alive, 2438 days
991.2
TCGA-59-2363-01A
40 years, female, asian, stage:Stage IIIA, alive, 165 days
981.6
TCGA-25-2393-01A
81 years, female, white, stage:Stage IIIC, dead, 1157 days
967.6
TCGA-13-1501-01A
50 years, female, white, stage:Stage IV, dead, 1314 days
940.8
TCGA-24-1467-01A
51 years, female, white, stage:Stage IIIC, dead, 3224 days
914.9
TCGA-13-0762-01A
65 years, female, white, stage:Stage IIIC, alive, 3400 days
892.6
TCGA-24-0982-01A
77 years, female, white, stage:Stage IIIC, dead, 679 days
859.7
TCGA-13-0906-01A
50 years, female, white, stage:Stage IIIC, alive, 3619 days
837.3
TCGA-29-A5NZ-01A
66 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
831.6
TCGA-24-1430-01A
68 years, female, white, stage:Stage IIIC, dead, 863 days
827.4
TCGA-30-1714-01A
68 years, female, white, stage:Stage IV, dead, 1158 days
819.3
TCGA-13-1492-01A
66 years, female, white, stage:Stage IIIC, dead, 3819 days
802.5
TCGA-61-2088-01A
51 years, female, white, stage:Stage IIIC, alive, 145 days
800.7
TCGA-24-1426-01A
43 years, female, white, stage:Stage IIIC, alive, 163 days
767.7
TCGA-61-1910-01A
56 years, female, white, stage:Stage IIC, alive, 1127 days
761.8
TCGA-09-2054-01A
58 years, female, black or african american, stage:Stage IIIC, dead, 637 days
747.1
TCGA-24-1424-01A
67 years, female, white, stage:Stage IIIC, alive, 183 days
745.0
TCGA-29-1697-01A
62 years, female, white, stage:Stage IIIC, dead, 949 days
723.6
TCGA-57-1582-01A
50 years, female, white, stage:Stage IIIC, dead, 731 days
698.6
TCGA-30-1892-01A
52 years, female, white, stage:Stage IIIC, dead, 1484 days
693.8
TCGA-61-2102-01A
74 years, female, white, stage:Stage IIIC, dead, 197 days
682.0
TCGA-25-1323-01A
72 years, female, white, stage:Stage IIIC, dead, 395 days
676.5
TCGA-29-2425-01A
60 years, female, white, stage:Stage IIIC, alive, 1977 days
656.9
TCGA-24-1544-01A
71 years, female, black or african american, stage:Stage IIIC, dead, 820 days
651.4
TCGA-23-1809-01A
63 years, female, white, stage:Stage IIC, alive, 16 days
646.8
TCGA-09-0369-01A
56 years, female, white, stage:Stage IIIC, dead, 1082 days
636.2
TCGA-WR-A838-01A
72 years, female, black or african american, stage:Stage IIIC, dead, 304 days
633.3
TCGA-13-1497-01A
47 years, female, white, stage:Stage IIIC, alive, 3871 days
626.6
TCGA-25-1317-01A
66 years, female, white, stage:Stage IIIC, dead, 61 days
624.1
TCGA-23-1113-01A
48 years, female, white, stage:Stage IV, dead, 949 days
586.4
TCGA-04-1331-01A
78 years, female, white, stage:Stage IIIC, dead, 1336 days
572.9
TCGA-36-1571-01A
53 years, female, white, stage:Stage IIIB, dead, 695 days
569.0
TCGA-04-1356-01A
62 years, female, white, stage:Stage IIC, dead, 1499 days
563.3
TCGA-30-1861-01A
74 years, female, white, stage:Stage IIIC, dead, 1058 days
560.1
TCGA-24-1419-01A
62 years, female, white, stage:Stage IIIC, alive, 239 days
556.0
TCGA-59-A5PD-01A
55 years, female, black or african american, stage:Stage IC, dead, 624 days
535.8
TCGA-61-1900-01A
51 years, female, black or african american, stage:Stage IIIB, alive, 176 days
530.6
TCGA-04-1341-01A
85 years, female, white, stage:'--, alive, 33 days
525.2
TCGA-5X-AA5U-01A
61 years, female, black or african american, stage:Stage IIC, alive, 361 days
470.7
TCGA-23-1022-01A
67 years, female, white, stage:Stage IIIC, dead, 1511 days
446.8
TCGA-13-0920-01A
65 years, female, white, stage:Stage IIIC, dead, 1484 days
433.7
TCGA-24-1552-01A
77 years, female, white, stage:Stage IIIC, dead, 1259 days
426.8
TCGA-13-1477-01A
49 years, female, white, stage:Stage IV, dead, 1662 days
421.3
TCGA-13-1489-01A
70 years, female, white, stage:Stage IIIC, dead, 2553 days
399.5
TCGA-36-1577-01A
43 years, female, asian, stage:Stage IIC, alive, 783 days
391.7
TCGA-24-2027-01A
51 years, female, white, stage:Stage IV, dead, 3337 days
389.5
TCGA-25-1877-01A
81 years, female, white, stage:Stage IIIC, dead, 730 days
347.2
TCGA-04-1514-01A
45 years, female, white, stage:Stage IIIA, dead, 1720 days
338.7
TCGA-20-1686-01A
75 years, female, white, stage:Stage IIIC, alive, 89 days
337.2
TCGA-29-1762-01A
59 years, female, white, stage:Stage IV, dead, 2634 days
334.5
TCGA-25-1632-01A
68 years, female, white, stage:Stage IV, dead, 1799 days
324.3
TCGA-OY-A56Q-01A
78 years, female, black or african american, stage:Stage IIA, alive, 576 days
322.0
TCGA-10-0938-01A
80 years, female, white, stage:Stage IIIC, dead, 636 days
297.4
TCGA-24-1567-01A
54 years, female, white, stage:Stage IIIB, dead, 524 days
292.0
TCGA-04-1350-01A
46 years, female, white, stage:Stage IIIC, dead, 1946 days
268.8
TCGA-61-2098-01A
62 years, female, white, stage:Stage IIIC, alive, 1993 days
267.2
TCGA-04-1347-01A
81 years, female, white, stage:Stage IV, alive, 1919 days
257.2
TCGA-09-2048-01A
63 years, female, white, stage:Stage IIIC, dead, 138 days
227.2
TCGA-25-1315-01A
50 years, female, white, stage:Stage IIIC, dead, 1583 days
216.9
TCGA-24-2020-01A
67 years, female, white, stage:Stage IIIC, dead, 4624 days
194.4
TCGA-10-0933-01A
77 years, female, white, stage:Stage IIIC, dead, 446 days
190.3
TCGA-23-1110-01A
42 years, female, white, stage:Stage IIIC, alive, 1658 days
182.5
TCGA-13-0800-01A
52 years, female, white, stage:Stage IIIC, alive, 2661 days
175.7
TCGA-04-1364-01A
61 years, female, white, stage:Stage IIIC, dead, 1024 days
172.9
TCGA-29-1774-01A
82 years, female, white, stage:Stage IIIC, alive, 527 days
156.8
TCGA-13-0888-01A
78 years, female, white, stage:Stage IIIC, dead, 2811 days
118.7
TCGA-25-1634-01A
75 years, female, white, stage:Stage IIIC, dead, 1091 days
118.4
TCGA-13-1407-01A
51 years, female, white, stage:Stage IIIC, alive, 2534 days
79.5
TCGA-09-0364-01A
80 years, female, white, stage:Stage IIC, dead, 887 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CD74 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1742.1
Number of samples
81
Samples
Sample
Description
TPM
DO46404
55 years, female, NA, stage:III, dead, 690 days
6057.8
DO46453
66 years, female, NA, stage:III, dead, 3294 days
5283.8
DO46350
66 years, female, NA, stage:III, dead, 886 days
4573.2
DO46372
39 years, female, NA, stage:III, dead, 1326 days
4560.7
DO46412
64 years, female, NA, stage:III, dead, 597 days
4362.4
DO46326
51 years, female, NA, stage:III, dead, 701 days
3973.6
DO46493
62 years, female, NA, stage:IV, alive, 839 days
3647.7
DO46366
65 years, female, NA, stage:III, dead, 2054 days
3252.6
DO46344
46 years, female, NA, stage:III, dead, 642 days
3154.9
DO46388
74 years, female, NA, stage:III, dead, 413 days
3075.6
DO46586
55 years, female, NA, stage:III, dead, 1019 days
3065.7
DO46602
74 years, female, NA, stage:III, dead, 205 days
2918.1
DO46606
73 years, female, NA, stage:III, alive, 804 days
2848.7
DO46376
58 years, female, NA, stage:III, dead, 1430 days
2789.0
DO46468
67 years, female, NA, stage:III, alive, 2776 days
2684.8
DO46378
59 years, female, NA, stage:III, alive, 843 days
2614.9
DO46352
60 years, female, NA, stage:III, dead, 677 days
2583.1
DO46374
69 years, female, NA, stage:III, dead, 1409 days
2555.6
DO46364
45 years, female, NA, stage:III, dead, 806 days
2473.4
DO46428
59 years, female, NA, stage:IV, alive, 2644 days
2437.5
DO46342
67 years, female, NA, stage:III, dead, 1398 days
2341.8
DO46597
60 years, female, NA, stage:III, dead, 393 days
2295.6
DO46368
57 years, female, NA, stage:III, dead, 2879 days
2268.5
DO46432
56 years, female, NA, stage:III, alive, 2218 days
2261.7
DO46386
49 years, female, NA, stage:III, dead, 1162 days
2225.0
DO46538
57 years, female, NA, stage:III, dead, 1527 days
2201.9
DO46458
67 years, female, NA, stage:IV, alive, 3787 days
2168.1
DO46394
61 years, female, NA, stage:IV, dead, 1039 days
2158.7
DO46329
52 years, female, NA, stage:III, dead, 1699 days
2126.6
DO46448
45 years, female, NA, stage:III, dead, 654 days
2098.5
DO46528
56 years, female, NA, stage:III, alive, 6139 days
2069.8
DO46325
54 years, female, NA, stage:III, dead, 477 days
2055.1
DO46354
73 years, female, NA, stage:III, dead, 843 days
2054.6
DO46332
56 years, female, NA, stage:III, dead, 689 days
1981.8
DO46518
62 years, female, NA, stage:III, alive, 2960 days
1865.2
DO46333
58 years, female, NA, stage:III, dead, 359 days
1862.7
DO46360
58 years, female, NA, stage:IV, dead, 1759 days
1736.4
DO46513
54 years, female, NA, stage:IV, dead, 1883 days
1649.5
DO46331
72 years, female, NA, stage:III, dead, 612 days
1633.9
DO46591
58 years, female, NA, stage:III, dead, 195 days
1622.3
DO46398
66 years, female, NA, stage:III, alive, 437 days
1577.8
DO46408
56 years, female, NA, stage:III, dead, 489 days
1512.9
DO46400
70 years, female, NA, stage:III, dead, 719 days
1482.0
DO46508
50 years, female, NA, stage:III, dead, 2101 days
1412.0
DO46348
58 years, female, NA, stage:IV, dead, 287 days
1251.1
DO46346
54 years, female, NA, stage:III, dead, 1187 days
1215.0
DO46566
78 years, female, NA, stage:III, dead, 673 days
1190.0
DO46436
58 years, female, NA, stage:III, alive, 3193 days
1162.9
DO46546
73 years, female, NA, stage:III, dead, 1889 days
1147.0
DO46438
55 years, female, NA, stage:IV, alive, 2227 days
1134.7
DO46340
62 years, female, NA, stage:III, dead, 616 days
1123.3
DO46581
66 years, female, NA, stage:III, dead, 408 days
1118.4
DO46327
54 years, female, NA, stage:III, dead, 184 days
1041.8
DO46571
61 years, female, NA, stage:III, dead, 243 days
1038.4
DO46358
60 years, female, NA, stage:III, dead, 423 days
1032.2
DO46384
55 years, female, NA, stage:III, dead, 614 days
809.6
DO46568
66 years, female, NA, stage:III, dead, 320 days
778.6
DO46336
70 years, female, NA, stage:IV, dead, 664 days
767.9
DO46443
59 years, female, NA, stage:III, dead, 2464 days
752.2
DO46382
62 years, female, NA, stage:IV, dead, 311 days
733.7
DO46576
75 years, female, NA, stage:III, alive, 133 days
714.0
DO46396
64 years, female, NA, stage:III, dead, 583 days
678.2
DO46380
51 years, female, NA, stage:III, dead, 1423 days
673.5
DO46560
45 years, female, NA, stage:IV, dead, 286 days
663.8
DO46523
52 years, female, NA, stage:IV, alive, 1873 days
654.3
DO46533
46 years, female, NA, stage:III, alive, 3667 days
588.0
DO46334
77 years, female, NA, stage:III, dead, 496 days
579.1
DO46390
65 years, female, NA, stage:III, dead, 374 days
569.8
DO46402
77 years, female, NA, stage:III, dead, 511 days
551.0
DO46328
52 years, female, NA, stage:III, dead, 972 days
520.2
DO46551
58 years, female, NA, stage:III, dead, 1055 days
494.1
DO46611
52 years, female, NA, stage:III, dead, 734 days
459.5
DO46330
60 years, female, NA, stage:III, dead, 684 days
415.6
DO46392
48 years, female, NA, stage:III, dead, 628 days
380.7
DO46370
54 years, female, NA, stage:III, dead, 1727 days
348.3
DO46362
61 years, female, NA, stage:III, dead, 1639 days
294.3
DO46463
49 years, female, NA, stage:III, dead, 2451 days
197.5
DO46561
52 years, female, NA, stage:III, dead, 195 days
134.2
DO46356
68 years, female, NA, stage:III, dead, 911 days
125.6
DO46588
74 years, female, NA, stage:III, dead, 438 days
121.5
DO46338
59 years, female, NA, stage:III, dead, 596 days
82.2
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
1.6
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
1.6
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
1.2
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
1.0
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
1.0
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.9
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.9
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.6
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.6
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.5
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.4
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.3
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.3
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.2
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.2
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.2
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.1
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.1
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.1
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.0
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.0
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.0
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.0
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.0
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.0
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-0.1
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.1
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.1
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-0.1
285fed94-1495-448e-879b-b55de9_D2
Tumor
-0.1
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-0.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.2
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-0.2
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.2
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-0.2
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.3
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.3
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.3
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-0.3
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-0.3
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.3
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.3
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.4
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.4
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-0.4
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-0.4
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-0.4
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-0.4
e9d416e7-f661-400a-896e-388545_D2
Tumor
-0.4
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.4
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.4
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.4
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.5
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-0.5
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-0.5
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.5
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.5
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.5
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-0.5
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.5
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.5
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-0.5
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.5
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.5
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-0.6
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.6
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.6
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-0.6
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.6
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-0.7
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.7
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-0.7
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.7
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-0.7
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.7
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.7
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.7
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.7
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-0.8
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.8
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-0.8
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.8
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.9
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-0.9
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.9
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.9
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.9
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.9
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.9
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.9
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.9
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-1.0
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-1.0
15524912-685a-47ce-a824-567848_D2
Tumor
-1.0
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-1.0
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-1.1
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-1.1
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-1.1
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-1.1
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-1.1
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-1.2
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-1.2
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-1.2
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-1.2
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-1.3
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-1.3
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-1.6
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-1.7
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
