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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CD74 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2842.9
Number of samples
349
Samples
Sample
Description
TPM
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
15588.9
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
11605.3
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
11379.7
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
10464.2
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
10289.4
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
9757.1
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
9705.6
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
9627.1
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
9297.9
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
9251.0
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
9120.4
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
9016.2
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
8890.3
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
8740.4
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
8492.2
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
8314.4
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
7437.5
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
7417.4
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
7226.5
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
7147.4
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
7133.5
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
6875.7
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
6763.3
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
6585.0
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
6567.8
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
6463.5
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
6410.5
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
6329.6
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
6311.5
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
6061.2
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
6013.2
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
5891.3
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
5792.4
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
5706.5
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
5608.9
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
5604.5
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
5565.6
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
5414.6
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
5322.2
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
5319.3
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
5298.1
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
5281.9
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
5260.8
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
5239.6
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
5146.2
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
5047.8
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
5023.1
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
5011.4
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
4988.2
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
4963.8
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
4958.3
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
4953.0
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
4925.9
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
4923.3
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
4919.7
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
4917.3
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
4911.9
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
4721.7
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
4711.3
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
4691.1
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
4656.8
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
4649.1
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
4648.2
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
4586.1
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
4487.9
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
4475.9
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
4422.7
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
4402.7
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
4355.4
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
4314.5
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
4289.6
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
4219.3
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
4201.4
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
4095.6
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
4091.6
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
4059.6
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
4023.5
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
3988.0
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
3981.5
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
3937.8
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
3921.9
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
3897.7
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
3868.2
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
3858.9
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
3831.1
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
3785.4
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
3782.3
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
3774.9
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
3736.5
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
3735.3
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
3720.1
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
3705.9
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
3694.8
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
3673.2
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
3661.5
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
3573.3
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
3563.8
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
3492.5
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
3459.9
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
3410.8
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
3383.3
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
3370.0
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
3338.5
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
3326.4
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
3303.8
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
3302.9
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
3276.1
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
3231.3
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
3229.5
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
3215.6
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
3201.9
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
3192.7
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
3174.2
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
3144.6
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
3142.9
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
3113.8
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
3107.5
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
3106.0
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
3091.0
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
3081.9
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
3076.1
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
3062.4
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
3042.7
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
3007.0
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
2995.7
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
2995.3
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
2966.6
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
2950.8
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
2936.8
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
2936.5
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
2933.7
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
2924.7
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
2919.5
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
2907.5
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
2901.1
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
2899.9
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
2882.9
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
2869.9
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
2854.3
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
2824.7
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
2811.0
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
2803.4
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
2785.7
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
2774.9
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
2769.5
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
2768.8
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
2765.9
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
2759.7
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
2759.4
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
2745.8
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
2733.2
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
2654.0
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
2627.0
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2624.7
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
2623.1
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
2621.3
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
2612.0
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
2596.9
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
2594.1
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
2582.0
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
2582.0
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
2533.9
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
2518.7
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
2517.2
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
2486.5
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
2479.8
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
2438.1
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
2414.1
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
2397.2
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
2385.0
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
2375.4
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
2371.9
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
2361.5
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
2343.2
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
2316.7
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
2307.7
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
2275.6
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
2274.5
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
2268.3
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
2260.8
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
2248.1
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
2212.8
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
2197.1
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
2193.6
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
2187.1
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
2178.3
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
2177.9
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
2171.0
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
2108.3
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
2105.7
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
2103.9
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
2082.8
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
2074.5
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
2069.1
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
2062.1
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
2037.1
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
2031.8
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
2027.4
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
2027.1
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
2026.9
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
2018.2
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1909.6
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
1898.5
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1897.3
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
1868.8
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
1868.2
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
1864.3
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1860.2
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
1840.6
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
1838.5
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1820.2
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
1805.6
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
1790.6
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
1789.2
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
1778.6
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1776.2
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1772.9
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
1761.9
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1752.2
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1729.9
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
1720.7
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1699.6
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1694.5
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
1659.2
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
1653.2
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1648.1
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1645.2
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1642.2
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1640.8
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
1626.9
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
1588.0
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
1581.9
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
1563.1
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
1555.5
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
1540.7
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
1531.8
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
1519.1
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1508.8
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
1494.5
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1491.7
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
1485.4
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
1463.4
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
1451.8
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
1440.5
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
1439.1
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
1436.8
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
1403.3
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
1397.5
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
1374.3
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1367.9
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
1341.2
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
1329.2
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
1309.0
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1308.7
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
1308.4
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
1299.6
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1241.6
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1225.2
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1222.7
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
1207.5
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
1190.1
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1188.0
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
1185.4
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
1184.8
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
1178.5
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1168.7
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
1161.3
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
1157.5
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
1145.0
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
1144.1
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
1139.2
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
1132.1
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1128.4
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
1093.0
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
1081.2
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
1064.0
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
1062.8
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
1036.1
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1030.9
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
1015.7
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
991.2
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
981.6
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
967.6
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
940.8
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
914.9
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
892.6
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
859.7
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
837.3
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
831.6
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
827.4
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
819.3
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
802.5
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
800.7
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
767.7
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
761.8
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
747.1
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
745.0
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
723.6
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
698.6
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
693.8
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
682.0
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
676.5
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
656.9
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
651.4
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
646.8
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
636.2
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
633.3
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
626.6
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
624.1
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
586.4
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
572.9
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
569.0
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
563.3
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
560.1
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
556.0
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
535.8
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
530.6
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
525.2
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
470.7
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
446.8
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
433.7
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
426.8
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
421.3
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
399.5
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
391.7
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
389.5
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
347.2
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
338.7
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
337.2
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
334.5
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
324.3
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
322.0
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
297.4
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
292.0
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
268.8
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
267.2
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
257.2
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
227.2
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
216.9
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
194.4
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
190.3
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
182.5
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
175.7
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
172.9
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
156.8
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
118.7
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
118.4
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
79.5
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CD74 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1742.1
Number of samples
81
Samples
Sample
Description
TPM
DO46404
0 years, female, NA, stage:III, dead, 690 days
6057.8
DO46453
0 years, female, NA, stage:III, dead, 3294 days
5283.8
DO46350
0 years, female, NA, stage:III, dead, 886 days
4573.2
DO46372
0 years, female, NA, stage:III, dead, 1326 days
4560.7
DO46412
0 years, female, NA, stage:III, dead, 597 days
4362.4
DO46326
0 years, female, NA, stage:III, dead, 701 days
3973.6
DO46493
0 years, female, NA, stage:IV, alive, 839 days
3647.7
DO46366
0 years, female, NA, stage:III, dead, 2054 days
3252.6
DO46344
0 years, female, NA, stage:III, dead, 642 days
3154.9
DO46388
0 years, female, NA, stage:III, dead, 413 days
3075.6
DO46586
0 years, female, NA, stage:III, dead, 1019 days
3065.7
DO46602
0 years, female, NA, stage:III, dead, 205 days
2918.1
DO46606
0 years, female, NA, stage:III, alive, 804 days
2848.7
DO46376
0 years, female, NA, stage:III, dead, 1430 days
2789.0
DO46468
0 years, female, NA, stage:III, alive, 2776 days
2684.8
DO46378
0 years, female, NA, stage:III, alive, 843 days
2614.9
DO46352
0 years, female, NA, stage:III, dead, 677 days
2583.1
DO46374
0 years, female, NA, stage:III, dead, 1409 days
2555.6
DO46364
0 years, female, NA, stage:III, dead, 806 days
2473.4
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
2437.5
DO46342
0 years, female, NA, stage:III, dead, 1398 days
2341.8
DO46597
0 years, female, NA, stage:III, dead, 393 days
2295.6
DO46368
0 years, female, NA, stage:III, dead, 2879 days
2268.5
DO46432
0 years, female, NA, stage:III, alive, 2218 days
2261.7
DO46386
0 years, female, NA, stage:III, dead, 1162 days
2225.0
DO46538
0 years, female, NA, stage:III, dead, 1527 days
2201.9
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
2168.1
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
2158.7
DO46329
0 years, female, NA, stage:III, dead, 1699 days
2126.6
DO46448
0 years, female, NA, stage:III, dead, 654 days
2098.5
DO46528
0 years, female, NA, stage:III, alive, 6139 days
2069.8
DO46325
0 years, female, NA, stage:III, dead, 477 days
2055.1
DO46354
0 years, female, NA, stage:III, dead, 843 days
2054.6
DO46332
0 years, female, NA, stage:III, dead, 689 days
1981.8
DO46518
0 years, female, NA, stage:III, alive, 2960 days
1865.2
DO46333
0 years, female, NA, stage:III, dead, 359 days
1862.7
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
1736.4
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
1649.5
DO46331
0 years, female, NA, stage:III, dead, 612 days
1633.9
DO46591
0 years, female, NA, stage:III, dead, 195 days
1622.3
DO46398
0 years, female, NA, stage:III, alive, 437 days
1577.8
DO46408
0 years, female, NA, stage:III, dead, 489 days
1512.9
DO46400
0 years, female, NA, stage:III, dead, 719 days
1482.0
DO46508
0 years, female, NA, stage:III, dead, 2101 days
1412.0
DO46348
0 years, female, NA, stage:IV, dead, 287 days
1251.1
DO46346
0 years, female, NA, stage:III, dead, 1187 days
1215.0
DO46566
0 years, female, NA, stage:III, dead, 673 days
1190.0
DO46436
0 years, female, NA, stage:III, alive, 3193 days
1162.9
DO46546
0 years, female, NA, stage:III, dead, 1889 days
1147.0
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
1134.7
DO46340
0 years, female, NA, stage:III, dead, 616 days
1123.3
DO46581
0 years, female, NA, stage:III, dead, 408 days
1118.4
DO46327
0 years, female, NA, stage:III, dead, 184 days
1041.8
DO46571
0 years, female, NA, stage:III, dead, 243 days
1038.4
DO46358
0 years, female, NA, stage:III, dead, 423 days
1032.2
DO46384
0 years, female, NA, stage:III, dead, 614 days
809.6
DO46568
0 years, female, NA, stage:III, dead, 320 days
778.6
DO46336
0 years, female, NA, stage:IV, dead, 664 days
767.9
DO46443
0 years, female, NA, stage:III, dead, 2464 days
752.2
DO46382
0 years, female, NA, stage:IV, dead, 311 days
733.7
DO46576
0 years, female, NA, stage:III, alive, 133 days
714.0
DO46396
0 years, female, NA, stage:III, dead, 583 days
678.2
DO46380
0 years, female, NA, stage:III, dead, 1423 days
673.5
DO46560
0 years, female, NA, stage:IV, dead, 286 days
663.8
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
654.3
DO46533
0 years, female, NA, stage:III, alive, 3667 days
588.0
DO46334
0 years, female, NA, stage:III, dead, 496 days
579.1
DO46390
0 years, female, NA, stage:III, dead, 374 days
569.8
DO46402
0 years, female, NA, stage:III, dead, 511 days
551.0
DO46328
0 years, female, NA, stage:III, dead, 972 days
520.2
DO46551
0 years, female, NA, stage:III, dead, 1055 days
494.1
DO46611
0 years, female, NA, stage:III, dead, 734 days
459.5
DO46330
0 years, female, NA, stage:III, dead, 684 days
415.6
DO46392
0 years, female, NA, stage:III, dead, 628 days
380.7
DO46370
0 years, female, NA, stage:III, dead, 1727 days
348.3
DO46362
0 years, female, NA, stage:III, dead, 1639 days
294.3
DO46463
0 years, female, NA, stage:III, dead, 2451 days
197.5
DO46561
0 years, female, NA, stage:III, dead, 195 days
134.2
DO46356
0 years, female, NA, stage:III, dead, 911 days
125.6
DO46588
0 years, female, NA, stage:III, dead, 438 days
121.5
DO46338
0 years, female, NA, stage:III, dead, 596 days
82.2
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
1.6
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
1.6
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
1.2
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
1.0
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
1.0
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.9
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.9
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.6
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.6
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.5
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.4
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.3
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.3
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.2
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.2
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.2
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.1
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.1
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.1
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.0
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.0
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.0
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.0
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.0
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.0
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-0.1
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.1
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.1
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-0.1
285fed94-1495-448e-879b-b55de9_D2
Tumor
-0.1
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-0.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.2
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-0.2
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.2
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-0.2
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.3
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.3
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.3
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-0.3
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-0.3
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.3
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.3
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.4
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.4
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-0.4
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-0.4
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-0.4
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-0.4
e9d416e7-f661-400a-896e-388545_D2
Tumor
-0.4
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.4
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.4
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.4
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.5
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-0.5
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-0.5
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.5
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.5
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.5
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-0.5
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.5
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.5
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-0.5
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.5
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.5
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-0.6
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.6
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.6
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-0.6
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.6
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-0.7
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.7
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-0.7
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.7
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-0.7
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.7
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.7
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.7
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.7
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-0.8
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.8
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-0.8
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.8
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.9
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-0.9
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.9
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.9
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.9
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.9
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.9
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.9
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.9
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-1.0
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-1.0
15524912-685a-47ce-a824-567848_D2
Tumor
-1.0
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-1.0
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-1.1
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-1.1
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-1.1
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-1.1
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-1.1
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-1.2
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-1.2
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-1.2
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-1.2
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-1.3
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-1.3
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-1.6
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-1.7
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.