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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CD74 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1140.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
10311.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
9080.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7831.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
6585.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
5856.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5832.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
5480.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
5309.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
5161.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
4906.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4540.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
4517.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4414.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
4259.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
4237.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
4165.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3738.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
3728.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3712.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3706.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3482.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3444.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
3357.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3274.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3029.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
3009.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
2989.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2904.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2794.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
2645.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
2632.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
2614.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
2543.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
2533.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
2525.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2499.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
2438.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2361.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2356.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
2257.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2250.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2219.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2168.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
2157.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2150.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
2135.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
2127.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
2123.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2102.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2072.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
2070.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
2040.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1999.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
1963.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1880.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
1877.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1874.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1871.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1858.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1837.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1765.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1731.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1712.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1703.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1691.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1663.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1660.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1649.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1628.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1625.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1604.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1602.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1579.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1524.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1509.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1502.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1491.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1491.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1484.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1478.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1442.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1440.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
1424.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1411.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1397.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1396.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1395.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1393.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1378.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
1369.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
1366.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1358.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1347.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1336.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1327.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1322.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1315.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1311.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1291.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1272.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1266.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1262.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1253.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1247.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1247.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1242.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1228.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1204.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1191.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
1184.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1182.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1172.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1157.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1146.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1142.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1121.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1109.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1104.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
1098.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1090.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1079.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1073.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1072.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1064.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1062.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1043.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1039.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
1038.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1037.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1035.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1030.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1013.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1008.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1004.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
999.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
988.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
987.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
979.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
970.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
956.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
953.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
931.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
930.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
929.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
928.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
923.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
922.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
916.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
915.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
906.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
883.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
880.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
876.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
875.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
874.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
874.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
863.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
862.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
854.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
852.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
850.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
847.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
847.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
817.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
810.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
808.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
807.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
792.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
782.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
778.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
761.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
749.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
748.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
741.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
739.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
732.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
730.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
726.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
724.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
723.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
721.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
718.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
718.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
717.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
717.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
716.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
716.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
707.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
706.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
701.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
699.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
695.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
689.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
688.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
688.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
687.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
681.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
680.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
678.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
675.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
669.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
669.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
664.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
659.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
657.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
656.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
648.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
642.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
639.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
630.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
627.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
625.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
622.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
618.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
614.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
609.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
599.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
597.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
594.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
589.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
586.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
579.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
574.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
574.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
566.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
559.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
558.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
557.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
551.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
545.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
535.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
528.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
526.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
525.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
519.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
518.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
517.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
513.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
511.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
484.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
482.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
479.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
476.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
468.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
466.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
462.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
455.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
455.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
452.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
442.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
442.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
440.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
428.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
427.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
423.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
420.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
417.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
412.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
410.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
405.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
405.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
398.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
384.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
383.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
380.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
376.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
375.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
374.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
371.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
364.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
363.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
363.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
362.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
361.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
348.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
346.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
345.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
344.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
342.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
340.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
336.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
335.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
333.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
330.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
328.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
324.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
320.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
320.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
315.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
306.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
306.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
305.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
304.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
302.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
294.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
290.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
288.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
285.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
282.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
277.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
273.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
272.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
271.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
266.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
264.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
261.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
259.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
252.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
251.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
250.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
249.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
248.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
244.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
244.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
243.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
243.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
241.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
237.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
237.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
236.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
236.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
235.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
235.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
234.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
232.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
230.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
229.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
221.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
218.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
210.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
210.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
207.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
206.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
205.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
197.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
195.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
195.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
186.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
185.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
174.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
165.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
165.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
162.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
155.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
152.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
150.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
149.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
147.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
146.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
143.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
142.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
139.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
126.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
110.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
106.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
105.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
98.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
93.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
87.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
82.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
63.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CD74 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1505.1
Number of samples
231
Samples
Sample
Description
TPM
DO23549
0 years, male, NA, stage:3, alive, 990 days
12875.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
10326.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
9617.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
8256.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
7170.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
7111.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
6182.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
5758.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
4817.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
4665.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
4587.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
4487.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
4102.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
4075.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
3755.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
3564.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
3483.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
3480.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
3452.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
3415.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
3376.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
3269.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
3187.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
3174.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
3158.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3111.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
3076.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
3028.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
3021.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
3008.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
2945.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
2942.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
2921.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
2663.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
2628.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
2619.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
2555.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
2545.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
2514.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
2458.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
2457.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
2316.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
2308.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
2306.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
2274.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
2212.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
2186.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
2185.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
2140.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
2136.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
2086.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
2078.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
2067.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
2057.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
2030.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2014.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
1999.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
1986.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
1976.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
1944.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
1941.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
1916.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
1849.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
1798.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
1791.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
1762.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
1748.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
1747.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
1671.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
1671.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1666.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
1661.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1653.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
1634.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
1614.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1604.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
1582.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
1575.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
1533.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
1510.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
1509.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
1508.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
1500.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
1492.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1417.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
1412.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
1398.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
1396.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
1379.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
1374.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
1368.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
1310.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
1266.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
1265.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
1259.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
1251.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
1226.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
1203.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
1197.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
1189.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
1178.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
1153.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1145.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
1136.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
1132.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
1117.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
1110.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
1109.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
1096.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1073.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
1047.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
1040.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
1022.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
1010.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
971.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
969.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
960.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
956.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
944.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
941.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
932.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
929.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
893.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
879.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
843.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
791.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
779.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
774.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
754.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
751.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
749.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
739.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
737.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
726.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
718.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
712.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
708.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
705.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
697.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
683.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
676.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
672.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
664.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
664.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
651.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
645.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
645.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
637.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
626.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
599.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
597.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
595.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
587.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
555.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
546.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
533.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
526.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
526.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
524.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
511.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
511.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
506.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
495.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
491.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
483.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
483.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
482.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
481.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
480.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
474.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
448.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
439.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
434.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
426.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
421.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
409.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
406.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
405.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
400.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
397.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
396.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
391.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
375.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
374.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
374.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
366.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
355.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
349.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
343.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
342.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
341.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
339.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
333.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
333.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
327.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
326.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
310.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
307.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
303.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
295.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
288.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
285.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
282.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
273.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
270.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
262.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
261.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
253.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
245.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
245.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
242.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
241.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
238.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
237.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
220.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
199.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
185.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
178.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
171.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
166.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
159.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
159.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
155.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
143.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
143.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
135.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
117.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
103.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
92.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
86.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
45.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
861
Tumor
2.2
557
Tumor
2.1
395
Tumor
1.7
211
Tumor
1.7
231
Tumor
1.5
724
Normal
1.5
383
Tumor
1.3
913
Tumor
1.2
978
Normal
1.2
685
Tumor
1.1
353
Tumor
1.1
311
Tumor
1.1
434
Normal
1.1
467
Tumor
1.0
721
Tumor
1.0
814
Normal
1.0
966
Normal
1.0
188
Normal
0.8
262
Normal
0.8
493
Tumor
0.8
755
Tumor
0.8
525
Tumor
0.8
161
Tumor
0.8
195
Tumor
0.8
1015
Tumor
0.8
823
Tumor
0.7
915
Tumor
0.7
914
Normal
0.7
953
Tumor
0.7
937
Tumor
0.7
497
Tumor
0.7
492
Normal
0.7
661
Tumor
0.7
171
Tumor
0.6
213
Tumor
0.6
217
Tumor
0.5
113
Tumor
0.5
355
Tumor
0.5
536
Normal
0.5
917
Tumor
0.5
883
Tumor
0.5
343
Tumor
0.4
981
Tumor
0.4
185
Tumor
0.4
963
Tumor
0.4
212
Normal
0.4
524
Normal
0.4
362
Normal
0.4
478
Normal
0.4
384
Normal
0.4
141
Tumor
0.4
443
Tumor
0.4
867
Tumor
0.4
663
Tumor
0.4
261
Tumor
0.4
375
Tumor
0.4
916
Normal
0.4
1031
Tumor
0.3
192
Normal
0.3
224
Normal
0.3
956
Normal
0.3
145
Tumor
0.3
126
Normal
0.3
455
Tumor
0.3
498
Normal
0.3
187
Tumor
0.3
955
Tumor
0.3
852
Normal
0.3
137
Tumor
0.3
535
Tumor
0.2
444
Normal
0.2
628
Normal
0.2
366
Normal
0.2
191
Tumor
0.2
516
Normal
0.2
272
Normal
0.2
268
Normal
0.2
396
Normal
0.2
857
Tumor
0.2
432
Normal
0.1
386
Normal
0.1
686
Normal
0.1
433
Tumor
0.1
874
Normal
0.1
662
Normal
0.1
952
Normal
0.1
312
Normal
0.1
1042
Normal
0.1
146
Normal
0.1
851
Tumor
0.1
451
Tumor
0.1
468
Normal
0.1
538
Normal
0.1
258
Normal
0.1
284
Normal
0.0
514
Normal
0.0
471
Tumor
0.0
716
Normal
0.0
494
Normal
0.0
1044
Normal
0.0
267
Tumor
0.0
523
Tumor
0.0
884
Normal
0.0
218
Normal
0.0
1027
Tumor
0.0
943
Tumor
0.0
138
Normal
0.0
114
Normal
0.0
297
Tumor
0.0
415
Tumor
0.0
813
Tumor
0.0
627
Tumor
0.0
976
Normal
-0.1
385
Tumor
-0.1
387
Tumor
-0.1
447
Tumor
-0.1
491
Tumor
-0.1
975
Tumor
-0.1
1013
Tumor
-0.1
461
Tumor
-0.1
574
Normal
-0.1
672
Normal
-0.1
456
Normal
-0.1
1045
Tumor
-0.1
421
Tumor
-0.1
142
Normal
-0.1
416
Normal
-0.1
162
Normal
-0.1
696
Normal
-0.1
926
Normal
-0.1
778
Normal
-0.1
922
Normal
-0.2
446
Normal
-0.2
528
Normal
-0.2
965
Tumor
-0.2
865
Tumor
-0.2
954
Normal
-0.2
918
Normal
-0.2
858
Normal
-0.2
487
Tumor
-0.2
283
Tumor
-0.2
554
Normal
-0.2
881
Tumor
-0.2
984
Normal
-0.2
364
Normal
-0.2
665
Tumor
-0.2
563
Tumor
-0.2
172
Normal
-0.2
472
Normal
-0.2
866
Normal
-0.2
818
Normal
-0.3
1028
Normal
-0.3
873
Tumor
-0.3
958
Normal
-0.3
214
Normal
-0.3
573
Tumor
-0.3
363
Tumor
-0.3
1043
Tumor
-0.3
228
Normal
-0.3
391
Tumor
-0.3
148
Normal
-0.3
864
Normal
-0.3
474
Normal
-0.3
124
Normal
-0.3
1016
Normal
-0.3
722
Normal
-0.3
664
Normal
-0.3
427
Tumor
-0.3
327
Tumor
-0.3
642
Normal
-0.3
1022
Normal
-0.3
223
Tumor
-0.3
558
Normal
-0.3
951
Tumor
-0.3
136
Normal
-0.4
356
Normal
-0.4
816
Normal
-0.4
1026
Normal
-0.4
824
Normal
-0.4
368
Normal
-0.4
617
Tumor
-0.4
641
Tumor
-0.4
286
Normal
-0.4
123
Tumor
-0.4
756
Normal
-0.4
877
Tumor
-0.4
868
Normal
-0.4
365
Tumor
-0.4
968
Normal
-0.4
354
Normal
-0.4
424
Normal
-0.4
367
Tumor
-0.4
232
Normal
-0.4
332
Normal
-0.4
111
Normal
-0.4
186
Normal
-0.4
977
Tumor
-0.4
925
Tumor
-0.4
196
Normal
-0.4
341
Tumor
-0.4
352
Normal
-0.4
862
Normal
-0.4
1046
Normal
-0.4
222
Normal
-0.4
944
Normal
-0.4
127
Tumor
-0.4
1032
Normal
-0.4
388
Normal
-0.4
1014
Normal
-0.4
392
Normal
-0.4
924
Normal
-0.4
285
Tumor
-0.4
982
Normal
-0.4
714
Normal
-0.5
526
Normal
-0.5
328
Normal
-0.5
882
Normal
-0.5
278
Normal
-0.5
393
Tumor
-0.5
412
Normal
-0.5
567
Tumor
-0.5
422
Normal
-0.5
738
Normal
-0.5
817
Tumor
-0.5
488
Normal
-0.5
135
Tumor
-0.5
878
Normal
-0.5
728
Normal
-0.5
351
Tumor
-0.5
464
Normal
-0.5
741
Tumor
-0.5
462
Normal
-0.5
298
Normal
-0.5
553
Tumor
-0.5
666
Normal
-0.5
938
Normal
-0.5
376
Normal
-0.5
128
Normal
-0.5
428
Normal
-0.5
518
Normal
-0.5
357
Tumor
-0.5
344
Normal
-0.5
697
Tumor
-0.5
436
Normal
-0.5
483
Tumor
-0.5
648
Normal
-0.5
394
Normal
-0.5
411
Tumor
-0.5
358
Normal
-0.6
616
Normal
-0.6
727
Tumor
-0.6
466
Normal
-0.6
132
Normal
-0.6
912
Normal
-0.6
964
Normal
-0.6
257
Tumor
-0.6
431
Tumor
-0.6
482
Normal
-0.6
713
Tumor
-0.6
786
Normal
-0.6
413
Tumor
-0.6
147
Tumor
-0.6
484
Normal
-0.6
546
Normal
-0.6
221
Tumor
-0.6
1041
Tumor
-0.6
342
Normal
-0.6
564
Normal
-0.7
572
Normal
-0.7
533
Tumor
-0.7
534
Normal
-0.7
545
Tumor
-0.7
448
Normal
-0.7
698
Normal
-0.7
361
Tumor
-0.7
715
Tumor
-0.7
331
Tumor
-0.7
983
Tumor
-0.7
923
Tumor
-0.7
815
Tumor
-0.7
227
Tumor
-0.7
463
Tumor
-0.7
452
Normal
-0.7
957
Tumor
-0.7
568
Normal
-0.8
414
Normal
-0.8
723
Tumor
-0.8
277
Tumor
-0.8
314
Normal
-0.8
911
Tumor
-0.8
863
Tumor
-0.8
744
Normal
-0.8
618
Normal
-0.8
271
Tumor
-0.8
481
Tumor
-0.8
423
Tumor
-0.8
1025
Tumor
-0.9
313
Tumor
-0.9
477
Tumor
-0.9
426
Normal
-0.9
647
Tumor
-0.9
445
Tumor
-0.9
636
Normal
-0.9
571
Tumor
-0.9
742
Normal
-0.9
785
Tumor
-0.9
515
Tumor
-0.9
671
Tumor
-1.0
537
Tumor
-1.0
1021
Tumor
-1.0
746
Normal
-1.0
465
Tumor
-1.0
125
Tumor
-1.1
615
Tumor
-1.1
513
Tumor
-1.1
435
Tumor
-1.1
112
Tumor
-1.2
921
Tumor
-1.2
745
Tumor
-1.2
473
Tumor
-1.2
967
Tumor
-1.3
777
Tumor
-1.3
695
Tumor
-1.3
737
Tumor
-1.4
131
Tumor
-1.4
517
Tumor
-1.4
527
Tumor
-1.4
425
Tumor
-1.5
635
Tumor
-1.9
743
Tumor
-2.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.