Expression of CD74 in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

CD74 is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 1305.33

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

1686.5

Number of samples

492

Samples

Sample	Description	TPM
TCGA-CN-A6UY-01A	57 years, male, white, stage:Stage IVA, alive, 713 days	11174.3
TCGA-CQ-5333-01A	74 years, male, white, stage:Stage II, dead, 341 days	10494.9
TCGA-CV-6433-01A	57 years, male, white, stage:Stage II, alive, 641 days	8851.5
TCGA-CN-6013-01A	56 years, male, white, stage:Stage IVA, dead, 727 days	8773.5
TCGA-CN-6995-01A	78 years, male, white, stage:Stage IVA, dead, 112 days	7588.2
TCGA-D6-6515-01A	82 years, female, white, stage:Stage II, dead, 403 days	7261.0
TCGA-CN-4735-01A	52 years, male, white, stage:Stage IVA, alive, 1737 days	7022.3
TCGA-CQ-7068-01A	80 years, female, white, stage:Stage II, alive, 1309 days	6712.9
TCGA-BA-5153-01A	51 years, male, white, stage:'--, dead, 1762 days	6531.7
TCGA-CV-6943-01A	74 years, male, white, stage:Stage III, dead, 602 days	6452.6
TCGA-BA-5559-01A	71 years, male, white, stage:'--, dead, 2083 days	6433.7
TCGA-CX-A4AQ-01A	56 years, male, white, stage:Stage IVA, alive, 1555 days	6377.2
TCGA-CR-7376-01A	83 years, male, white, stage:Stage III, alive, 972 days	6269.5
TCGA-CV-A6JZ-01A	68 years, male, white, stage:Stage II, alive, 714 days	6210.7
TCGA-CV-A461-01A	65 years, male, white, stage:'--, dead, 2064 days	6112.5
TCGA-CR-6484-01A	67 years, female, asian, stage:Stage IVA, alive, 354 days	6053.1
TCGA-IQ-A61I-01A	63 years, male, black or african american, stage:Stage IVA, dead, 2 days	5931.9
TCGA-CR-6482-01A	62 years, male, black or african american, stage:'--, alive, 345 days	5923.1
TCGA-CV-7410-01A	61 years, male, white, stage:Stage III, dead, 6417 days	5166.8
TCGA-H7-8501-01A	54 years, male, white, stage:Stage IVA, alive, 461 days	5132.7
TCGA-CV-5444-01A	64 years, male, black or african american, stage:Stage IVA, alive, 2437 days	5088.8
TCGA-CN-4736-01A	70 years, female, white, stage:'--, dead, 395 days	5037.8
TCGA-DQ-7591-01A	62 years, male, white, stage:'--, alive, 622 days	5028.3
TCGA-BA-5556-01A	58 years, female, white, stage:Stage II, alive, 725 days	4935.7
TCGA-CR-7399-01A	60 years, female, white, stage:Stage IVA, alive, 181 days	4932.7
TCGA-HL-7533-01A	65 years, male, white, stage:'--, alive, 1057 days	4894.8
TCGA-CQ-6219-01A	50 years, female, white, stage:Stage IVA, dead, 479 days	4831.9
TCGA-CV-7427-01A	73 years, female, white, stage:Stage II, dead, 4760 days	4825.8
TCGA-CN-6996-01A	58 years, female, white, stage:Stage IVA, dead, 530 days	4788.1
TCGA-CV-7433-01A	49 years, male, white, stage:Stage IVA, dead, 601 days	4767.3
TCGA-DQ-5630-01A	73 years, male, white, stage:'--, alive, 1030 days	4737.4
TCGA-BB-4225-01A	73 years, male, white, stage:'--, alive, 146 days	4607.8
TCGA-CR-6478-01A	66 years, female, white, stage:'--, dead, 183 days	4507.9
TCGA-QK-A6IF-01A	61 years, male, white, stage:'--, alive, 704 days	4342.1
TCGA-CV-5439-01A	62 years, male, white, stage:Stage IVA, dead, 546 days	4341.7
TCGA-CN-A642-01A	57 years, male, white, stage:Stage IVB, dead, 82 days	4339.9
TCGA-CN-6017-01A	55 years, male, white, stage:Stage IVA, dead, 853 days	4311.4
TCGA-T2-A6WX-01A	73 years, female, white, stage:'--, dead, 209 days	4277.2
TCGA-F7-A620-01A	47 years, male, white, stage:Stage III, alive, 543 days	4261.3
TCGA-CR-6481-01A	47 years, male, white, stage:'--, alive, 311 days	4257.6
TCGA-CR-7386-01A	69 years, male, white, stage:Stage IVA, alive, 1430 days	4173.1
TCGA-MT-A67F-01A	60 years, female, white, stage:Stage IVA, alive, 384 days	4165.7
TCGA-KU-A6H7-01A	55 years, female, white, stage:Stage IVA, alive, 586 days	3965.1
TCGA-CN-4728-01A	56 years, male, white, stage:Stage IVA, alive, 1724 days	3953.5
TCGA-CQ-7063-01A	59 years, female, white, stage:Stage I, alive, 2133 days	3915.2
TCGA-CR-7402-01A	68 years, male, white, stage:'--, alive, 911 days	3849.3
TCGA-F7-8489-01A	48 years, male, white, stage:Stage II, alive, 658 days	3849.0
TCGA-P3-A5Q5-01A	54 years, male, white, stage:Stage IVA, alive, 910 days	3839.5
TCGA-H7-A76A-01A	57 years, male, white, stage:'--, alive, 637 days	3825.2
TCGA-MZ-A5BI-01A	53 years, male, white, stage:'--, dead, 217 days	3811.7
TCGA-CN-5370-01A	78 years, male, white, stage:Stage III, dead, 259 days	3767.6
TCGA-UP-A6WW-01A	58 years, male, white, stage:'--, alive, 518 days	3762.8
TCGA-CR-7395-01A	80 years, female, white, stage:Stage II, alive, 930 days	3724.5
TCGA-BA-A6DJ-01A	62 years, male, asian, stage:Stage IVA, dead, 407 days	3715.8
TCGA-CN-A49B-01A	71 years, male, white, stage:Stage III, alive, 904 days	3712.1
TCGA-CN-6019-01A	61 years, male, white, stage:Stage IVA, alive, 1038 days	3707.6
TCGA-CN-5363-01A	48 years, male, black or african american, stage:Stage IVB, dead, 253 days	3706.6
TCGA-CR-6487-01A	50 years, male, white, stage:Stage I, alive, 234 days	3673.4
TCGA-CV-6938-01A	87 years, male, white, stage:Stage II, dead, 144 days	3653.3
TCGA-BB-A6UM-01A	52 years, male, white, stage:Stage III, alive, 393 days	3652.9
TCGA-QK-A6V9-01A	56 years, male, white, stage:Stage II, alive, 833 days	3624.9
TCGA-CR-7377-01A	58 years, male, white, stage:Stage IVA, dead, 279 days	3619.0
TCGA-CV-6939-01A	60 years, male, white, stage:Stage IVA, dead, 666 days	3596.1
TCGA-QK-A8Z8-01A	60 years, female, black or african american, stage:Stage IVC, dead, 171 days	3584.6
TCGA-CQ-5327-01A	61 years, female, asian, stage:Stage IVA, alive, 1660 days	3571.7
TCGA-CN-4738-01A	53 years, male, white, stage:Stage IVA, dead, 436 days	3558.8
TCGA-CV-A6JD-01A	82 years, female, white, stage:'--, dead, 182 days	3503.6
TCGA-CQ-6222-01A	63 years, male, white, stage:Stage IVA, alive, 2016 days	3501.6
TCGA-D6-6824-01A	61 years, male, white, stage:Stage IVA, alive, 77 days	3499.8
TCGA-CR-5243-01A	51 years, male, white, stage:'--, alive, 2562 days	3480.9
TCGA-CN-5360-01A	68 years, male, white, stage:Stage IVA, alive, 2169 days	3459.6
TCGA-CR-7373-01A	66 years, male, white, stage:Stage IVA, alive, 889 days	3453.6
TCGA-UF-A7JT-01A	72 years, female, white, stage:Stage IVA, dead, 993 days	3450.4
TCGA-CQ-5331-01A	73 years, female, white, stage:'--, alive, 1399 days	3437.8
TCGA-D6-A6EM-01A	65 years, female, white, stage:Stage III, alive, 232 days	3404.1
TCGA-CV-5443-01A	63 years, male, black or african american, stage:Stage III, alive, 2784 days	3387.6
TCGA-CQ-5334-01A	87 years, male, white, stage:Stage IVA, dead, 129 days	3377.3
TCGA-CV-7254-01A	55 years, male, white, stage:Stage II, dead, 1459 days	3313.1
TCGA-CQ-5325-01A	65 years, male, white, stage:Stage I, dead, 654 days	3233.4
TCGA-CN-4733-01A	61 years, male, white, stage:Stage III, alive, 1586 days	3222.4
TCGA-CR-6470-01A	38 years, male, white, stage:Stage II, alive, 1521 days	3209.9
TCGA-CR-7394-01A	70 years, male, white, stage:Stage IVA, alive, 1346 days	3173.2
TCGA-CR-5248-01A	53 years, male, white, stage:'--, alive, 1663 days	3109.0
TCGA-CR-7382-01A	49 years, male, white, stage:Stage IVA, alive, 796 days	3105.0
TCGA-P3-A5QE-01A	49 years, male, white, stage:Stage III, alive, 1559 days	3098.0
TCGA-CQ-6220-01A	69 years, male, white, stage:Stage III, dead, 985 days	3093.0
TCGA-CN-6989-01A	64 years, male, white, stage:Stage IVA, dead, 980 days	3054.9
TCGA-F7-A624-01A	73 years, male, white, stage:Stage II, alive, 378 days	3013.6
TCGA-CN-6018-01A	85 years, female, white, stage:Stage IVA, dead, 580 days	3009.2
TCGA-CQ-5329-01A	46 years, female, white, stage:Stage II, alive, 2143 days	2953.5
TCGA-CQ-5330-01A	69 years, female, white, stage:Stage IVA, alive, 1897 days	2947.8
TCGA-CV-6954-01A	59 years, male, black or african american, stage:Stage IVA, dead, 2002 days	2937.5
TCGA-UF-A7JO-01A	79 years, female, white, stage:Stage IVA, dead, 631 days	2935.1
TCGA-CR-5249-01A	35 years, female, white, stage:Stage II, alive, 1152 days	2853.0
TCGA-DQ-5625-01A	52 years, female, white, stage:'--, dead, 1133 days	2840.9
TCGA-CR-7393-01A	26 years, male, white, stage:Stage III, alive, 993 days	2837.7
TCGA-CV-5966-01A	63 years, female, white, stage:Stage IVA, dead, 545 days	2836.7
TCGA-CQ-A4CD-01A	69 years, male, white, stage:Stage IVA, alive, 1022 days	2834.9
TCGA-CV-A468-01A	42 years, male, stage:Stage IVA, dead, 464 days	2831.4
TCGA-D6-A6EN-01A	71 years, male, white, stage:Stage III, alive, 687 days	2806.5
TCGA-CV-6934-01A	66 years, female, white, stage:Stage IVA, dead, 65 days	2783.8
TCGA-CV-7104-01A	61 years, female, white, stage:Stage IVA, dead, 393 days	2740.2
TCGA-CN-5369-01A	90 years, female, white, stage:Stage IVA, dead, 1 days	2733.8
TCGA-CN-5359-01A	59 years, male, white, stage:Stage IVA, dead, 377 days	2720.2
TCGA-CV-6936-01A	68 years, male, white, stage:Stage IVA, dead, 166 days	2706.3
TCGA-CV-7407-01A	67 years, female, white, stage:Stage II, dead, 1081 days	2664.4
TCGA-TN-A7HL-01A	59 years, male, white, stage:Stage IVA, alive, 619 days	2662.9
TCGA-BA-5152-01A	56 years, male, white, stage:Stage IVA, alive, 1288 days	2624.9
TCGA-CN-5358-01A	60 years, male, white, stage:Stage II, dead, 261 days	2600.7
TCGA-CV-6961-01A	61 years, male, white, stage:Stage II, dead, 76 days	2565.0
TCGA-CV-7100-01A	66 years, male, white, stage:Stage III, dead, 274 days	2505.5
TCGA-D6-6825-01A	73 years, male, white, stage:Stage I, alive, 491 days	2481.2
TCGA-CN-6016-01A	64 years, male, white, stage:Stage IVA, alive, 1443 days	2459.6
TCGA-CN-4740-01A	79 years, female, white, stage:Stage IVA, dead, 839 days	2444.2
TCGA-CN-A6V6-01A	59 years, male, white, stage:Stage IVA, alive, 635 days	2422.6
TCGA-HD-8314-01A	58 years, male, white, stage:Stage III, alive, 670 days	2420.7
TCGA-CV-6937-01A	71 years, male, white, stage:Stage II, dead, 624 days	2416.1
TCGA-D6-6826-01A	64 years, female, white, stage:Stage IVA, dead, 348 days	2401.8
TCGA-CV-6942-01A	73 years, female, white, stage:Stage II, alive, 4282 days	2384.3
TCGA-QK-A6VC-01A	62 years, female, black or african american, stage:Stage IVA, alive, 600 days	2369.1
TCGA-F7-A61S-01A	62 years, male, white, stage:Stage III, alive, 576 days	2357.6
TCGA-CR-6480-01A	53 years, male, white, stage:'--, alive, 362 days	2347.9
TCGA-BA-5555-01A	54 years, male, black or african american, stage:Stage IVA, alive, 520 days	2337.0
TCGA-CN-4734-01A	70 years, male, white, stage:Stage II, alive, 1690 days	2311.2
TCGA-CX-7085-01A	77 years, female, white, stage:Stage I, alive, 321 days	2299.1
TCGA-IQ-A61O-01A	43 years, male, white, stage:Stage IVA, dead, 421 days	2288.7
TCGA-CV-5971-01A	60 years, male, white, stage:Stage IVA, alive, 701 days	2287.7
TCGA-CV-7415-01A	60 years, male, white, stage:Stage IVA, dead, 695 days	2279.8
TCGA-CN-A6V3-01A	61 years, male, white, stage:Stage IVA, alive, 742 days	2277.0
TCGA-CV-5431-01A	73 years, male, white, stage:Stage IVA, dead, 522 days	2270.4
TCGA-CV-7428-01A	47 years, male, white, stage:Stage IVA, dead, 1671 days	2263.3
TCGA-BB-4217-01A	68 years, male, black or african american, stage:Stage IVA, alive, 187 days	2235.4
TCGA-T2-A6X2-01A	82 years, male, white, stage:Stage III, alive, 987 days	2204.2
TCGA-CQ-6221-01A	79 years, male, white, stage:'--, alive, 1000 days	2191.3
TCGA-CQ-6224-01A	52 years, male, white, stage:Stage IVA, alive, 1721 days	2180.0
TCGA-CV-7178-01A	64 years, female, white, stage:Stage IVA, dead, 2166 days	2179.3
TCGA-CV-A460-01A	72 years, male, white, stage:'--, dead, 1838 days	2178.1
TCGA-CR-5250-01A	71 years, male, white, stage:'--, alive, 799 days	2178.0
TCGA-CV-7090-01A	39 years, male, white, stage:Stage II, alive, 5252 days	2158.1
TCGA-CN-5373-01A	55 years, female, white, stage:Stage I, alive, 1584 days	2151.5
TCGA-CV-7235-01A	67 years, male, white, stage:Stage II, alive, 2347 days	2122.9
TCGA-CN-A499-01A	60 years, female, white, stage:Stage II, alive, 717 days	2122.7
TCGA-CR-6467-01A	59 years, male, white, stage:Stage III, alive, 1777 days	2111.9
TCGA-CR-7392-01A	67 years, female, white, stage:Stage IVA, alive, 1425 days	2111.5
TCGA-CR-7404-01A	53 years, male, white, stage:'--, alive, 1472 days	2095.6
TCGA-CV-6955-01A	74 years, female, white, stage:Stage II, dead, 334 days	2084.2
TCGA-CV-5430-01A	61 years, male, white, stage:Stage IVA, alive, 4241 days	2079.5
TCGA-BA-A4IH-01A	57 years, male, white, stage:'--, alive, 622 days	2068.5
TCGA-RS-A6TO-01A	82 years, female, white, stage:Stage IVA, dead, 387 days	2055.2
TCGA-BA-A6DB-01A	24 years, female, white, stage:Stage I, alive, 216 days	2052.8
TCGA-CR-7391-01A	36 years, female, white, stage:Stage I, alive, 913 days	2023.5
TCGA-CV-6436-01A	62 years, male, white, stage:Stage IVA, alive, 1899 days	1982.7
TCGA-CN-6022-01A	49 years, male, white, stage:Stage IVA, dead, 281 days	1969.3
TCGA-CN-4741-01A	75 years, male, white, stage:Stage IVA, alive, 2239 days	1948.2
TCGA-CR-7385-01A	42 years, male, white, stage:'--, alive, 997 days	1945.8
TCGA-HD-A6HZ-01A	79 years, female, white, stage:Stage III, alive, 111 days	1937.8
TCGA-4P-AA8J-01A	66 years, male, black or african american, stage:Stage IVA, alive, 102 days	1936.4
TCGA-BB-8596-01A	69 years, female, white, stage:Stage IVA, alive, 2161 days	1931.6
TCGA-CV-A45Y-01A	61 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	1924.3
TCGA-CN-6023-01A	73 years, male, white, stage:Stage IVA, alive, 1584 days	1915.2
TCGA-CV-7099-01A	85 years, female, white, stage:Stage II, dead, 243 days	1877.6
TCGA-CN-A63T-01A	60 years, male, white, stage:Stage IVA, alive, 225 days	1845.6
TCGA-UF-A7JV-01A	62 years, female, white, stage:Stage IVA, dead, 90 days	1841.9
TCGA-CV-7097-01A	53 years, male, white, stage:Stage II, dead, 385 days	1803.6
TCGA-CR-7383-01A	79 years, female, white, stage:Stage I, dead, 521 days	1779.3
TCGA-QK-AA3K-01A	60 years, male, black or african american, stage:Stage IVA, alive, 253 days	1778.5
TCGA-D6-8569-01A	52 years, male, white, stage:Stage II, alive, 770 days	1777.3
TCGA-CQ-A4C6-01A	63 years, male, asian, stage:Stage II, alive, 1353 days	1767.2
TCGA-RS-A6TP-01A	58 years, male, white, stage:Stage II, alive, 516 days	1763.4
TCGA-CV-7413-01A	74 years, female, white, stage:Stage II, dead, 294 days	1753.3
TCGA-CV-A45T-01A	64 years, female, white, stage:'--, dead, 4856 days	1750.8
TCGA-IQ-A6SH-01A	55 years, male, black or african american, stage:Stage III, alive, 471 days	1745.5
TCGA-CQ-5323-01A	82 years, male, white, stage:Stage I, alive, 1466 days	1737.5
TCGA-UF-A7JJ-01A	68 years, male, stage:Stage IVA, alive, 549 days	1735.8
TCGA-CV-7242-01A	60 years, female, white, stage:Stage II, alive, 1095 days	1734.7
TCGA-CN-5374-01A	56 years, female, white, stage:Stage IVA, dead, 1732 days	1726.6
TCGA-CN-5367-01A	60 years, female, white, stage:Stage IVA, dead, 352 days	1715.7
TCGA-CV-5434-01A	60 years, male, black or african american, stage:Stage IVA, dead, 3314 days	1715.2
TCGA-HD-7832-01A	52 years, male, white, stage:Stage IVA, alive, 836 days	1712.2
TCGA-T3-A92M-01A	52 years, male, black or african american, stage:Stage IVA, alive, 417 days	1704.5
TCGA-CV-A45Z-01A	75 years, male, white, stage:'--, dead, 1466 days	1679.1
TCGA-BA-6873-01A	28 years, male, white, stage:Stage IVA, alive, 122 days	1677.0
TCGA-QK-A6IJ-01A	71 years, male, white, stage:Stage III, alive, 387 days	1654.9
TCGA-CV-6959-01A	48 years, male, white, stage:Stage III, dead, 256 days	1638.1
TCGA-CR-6492-01A	78 years, male, white, stage:Stage III, alive, 479 days	1626.8
TCGA-BB-4223-01A	48 years, male, white, stage:Stage IVA, alive, 3221 days	1600.5
TCGA-MT-A7BN-01A	74 years, male, white, stage:Stage IVA, alive, 469 days	1586.0
TCGA-CR-6471-01A	58 years, male, white, stage:Stage IVA, dead, 1202 days	1577.0
TCGA-CR-7371-01A	45 years, female, white, stage:Stage III, dead, 94 days	1576.4
TCGA-HD-7229-01A	60 years, male, white, stage:Stage IVA, alive, 1027 days	1569.7
TCGA-CN-5365-01A	38 years, male, white, stage:Stage IVB, dead, 351 days	1558.8
TCGA-CR-6477-01A	56 years, female, white, stage:'--, alive, 514 days	1549.2
TCGA-CR-6488-01A	68 years, female, white, stage:Stage II, alive, 379 days	1522.1
TCGA-CN-A497-01A	63 years, male, stage:Stage III, alive, 1065 days	1503.9
TCGA-T3-A92N-01A	79 years, male, black or african american, stage:Stage IVA, dead, 95 days	1486.6
TCGA-P3-A6SW-01A	50 years, male, white, stage:Stage IVB, alive, 1120 days	1467.1
TCGA-CX-7219-01A	47 years, male, black or african american, stage:Stage IVA, alive, 1045 days	1463.1
TCGA-CN-6010-01A	53 years, male, white, stage:Stage IVA, alive, 1523 days	1462.7
TCGA-CR-7397-01A	44 years, male, white, stage:Stage IVA, alive, 754 days	1456.4
TCGA-CN-6012-01A	66 years, male, white, stage:Stage IVA, alive, 1460 days	1449.7
TCGA-CN-4731-01A	63 years, female, white, stage:Stage IVA, dead, 998 days	1449.0
TCGA-CR-7368-01A	54 years, male, white, stage:Stage IVA, alive, 1245 days	1448.9
TCGA-UF-A718-01A	62 years, male, white, stage:Stage IVA, alive, 1971 days	1440.2
TCGA-CV-A464-01A	48 years, male, white, stage:Stage III, alive, 1722 days	1428.3
TCGA-CV-7102-01A	76 years, female, white, stage:Stage IVA, dead, 56 days	1421.7
TCGA-T2-A6X0-01A	49 years, male, white, stage:'--, alive, 216 days	1419.7
TCGA-IQ-A61J-01A	54 years, male, white, stage:Stage IVA, alive, 1021 days	1409.8
TCGA-CV-7263-01A	64 years, male, black or african american, stage:Stage II, dead, 560 days	1409.1
TCGA-CN-A498-01A	61 years, female, white, stage:Stage III, dead, 773 days	1404.5
TCGA-BA-A6DD-01A	44 years, male, black or african american, stage:Stage IVA, dead, 173 days	1394.3
TCGA-BA-5558-01A	65 years, male, white, stage:'--, alive, 1995 days	1389.0
TCGA-BA-4078-01A	83 years, male, white, stage:'--, dead, 276 days	1384.5
TCGA-IQ-A61E-01A	55 years, female, white, stage:Stage III, alive, 1147 days	1382.1
TCGA-UF-A7JF-01A	80 years, male, white, stage:Stage IVA, alive, 1686 days	1352.9
TCGA-CV-7435-01A	57 years, female, white, stage:Stage IVA, dead, 4680 days	1339.4
TCGA-D6-6516-01A	69 years, male, white, stage:Stage I, alive, 773 days	1334.6
TCGA-BA-5557-01A	41 years, female, stage:Stage III, alive, 623 days	1318.4
TCGA-CV-6952-01A	65 years, female, white, stage:Stage IVA, dead, 185 days	1314.6
TCGA-CQ-7071-01A	76 years, female, white, stage:Stage III, alive, 1311 days	1312.9
TCGA-CN-6994-01A	67 years, male, white, stage:Stage IVA, alive, 1183 days	1311.2
TCGA-CV-5978-01A	53 years, female, black or african american, stage:Stage IVB, dead, 215 days	1299.5
TCGA-H7-7774-01A	75 years, female, white, stage:Stage IVA, alive, 407 days	1297.2
TCGA-CV-7425-01A	77 years, female, white, stage:Stage III, dead, 1718 days	1262.0
TCGA-UF-A7JH-01A	59 years, male, black or african american, stage:Stage IVA, alive, 896 days	1242.6
TCGA-BA-5151-01A	72 years, male, white, stage:Stage IVA, alive, 722 days	1238.4
TCGA-CN-5364-01A	55 years, male, white, stage:Stage IVA, dead, 493 days	1229.6
TCGA-CV-6933-01A	53 years, male, white, stage:Stage III, dead, 2741 days	1229.0
TCGA-CV-7101-01A	80 years, male, white, stage:Stage II, dead, 160 days	1225.5
TCGA-CR-6474-01A	51 years, male, white, stage:Stage IVA, dead, 564 days	1220.4
TCGA-CV-7238-01A	69 years, female, white, stage:Stage II, alive, 2727 days	1202.6
TCGA-CV-7089-01A	74 years, male, white, stage:Stage IVA, dead, 1972 days	1196.7
TCGA-BA-A6DI-01A	62 years, male, black or african american, stage:'--, dead, 336 days	1184.5
TCGA-BA-6871-01A	75 years, male, white, stage:'--, dead, 108 days	1181.3
TCGA-CN-5366-01A	51 years, male, white, stage:Stage IVA, dead, 360 days	1179.0
TCGA-BA-6869-01A	62 years, male, white, stage:Stage III, alive, 644 days	1178.7
TCGA-CV-A45V-01A	87 years, female, white, stage:Stage IVA, dead, 32 days	1178.0
TCGA-CN-4723-01A	67 years, male, white, stage:Stage IVA, alive, 1699 days	1176.6
TCGA-QK-A652-01A	60 years, male, white, stage:Stage III, alive, 645 days	1166.7
TCGA-F7-7848-01A	47 years, male, white, stage:Stage IVA, alive, 1131 days	1161.7
TCGA-CV-5970-01A	59 years, male, white, stage:Stage IVA, dead, 406 days	1149.8
TCGA-F7-A50G-01A	66 years, male, white, stage:Stage III, alive, 616 days	1148.2
TCGA-D6-6517-01A	59 years, male, white, stage:Stage III, alive, 292 days	1143.2
TCGA-CR-7388-01A	70 years, female, white, stage:'--, dead, 823 days	1136.5
TCGA-CV-7416-01A	29 years, female, white, stage:Stage IVA, dead, 763 days	1134.1
TCGA-CR-7380-01A	58 years, male, white, stage:Stage IVB, dead, 606 days	1133.6
TCGA-CV-7236-01A	77 years, female, white, stage:Stage IVA, dead, 144 days	1122.5
TCGA-CQ-5326-01A	67 years, male, white, stage:Stage IVA, dead, 89 days	1118.7
TCGA-CN-5361-01A	80 years, male, white, stage:Stage IVA, dead, 2120 days	1114.2
TCGA-CR-7389-01A	55 years, male, black or african american, stage:'--, alive, 392 days	1101.6
TCGA-CV-7248-01A	63 years, female, black or african american, stage:Stage IVA, dead, 521 days	1097.9
TCGA-IQ-7630-01A	49 years, male, white, stage:Stage II, alive, 485 days	1070.8
TCGA-CN-6020-01A	58 years, male, black or african american, stage:Stage III, dead, 205 days	1066.1
TCGA-MT-A51W-01A	52 years, female, white, stage:Stage I, alive, 437 days	1064.7
TCGA-CV-7438-01A	87 years, female, white, stage:Stage I, dead, 194 days	1060.0
TCGA-UF-A7J9-01A	75 years, male, white, stage:Stage IVA, alive, 1358 days	1049.2
TCGA-DQ-7592-01A	57 years, male, american indian or alaska native, stage:'--, alive, 1143 days	1047.0
TCGA-DQ-5624-01A	43 years, female, white, stage:'--, alive, 1778 days	1040.7
TCGA-CR-7401-01A	64 years, male, white, stage:Stage I, alive, 1077 days	1034.4
TCGA-CV-7252-01A	62 years, female, black or african american, stage:Stage IVA, dead, 151 days	1016.4
TCGA-CQ-6229-01A	61 years, male, white, stage:Stage II, alive, 1179 days	1015.6
TCGA-CQ-A4C7-01A	88 years, male, white, stage:Stage III, dead, 353 days	1003.0
TCGA-CV-A45W-01A	75 years, male, white, stage:Stage II, dead, 1398 days	999.3
TCGA-CV-A45R-01A	46 years, male, white, stage:Stage III, alive, 5480 days	997.3
TCGA-D6-A6EQ-01A	57 years, male, white, stage:Stage IVA, alive, 368 days	993.3
TCGA-CR-7367-01A	52 years, male, white, stage:Stage IVA, alive, 1440 days	992.0
TCGA-HD-7754-01A	69 years, male, white, stage:Stage IVA, alive, 783 days	970.8
TCGA-F7-A50I-01A	72 years, male, white, stage:Stage IVA, alive, 92 days	966.2
TCGA-CQ-A4CB-01A	59 years, male, stage:Stage III, alive, 893 days	945.2
TCGA-QK-A6II-01A	52 years, male, white, stage:Stage IVA, dead, 284 days	937.4
TCGA-CQ-6223-01A	69 years, male, white, stage:Stage II, alive, 1428 days	933.8
TCGA-CV-7261-01A	57 years, male, white, stage:Stage IVA, alive, 1512 days	926.2
TCGA-CR-7370-01A	72 years, female, white, stage:'--, alive, 105 days	921.6
TCGA-CV-7091-01A	54 years, male, white, stage:Stage I, alive, 3381 days	920.3
TCGA-CQ-6227-01A	77 years, male, white, stage:Stage IVA, dead, 129 days	916.9
TCGA-CV-7429-01A	55 years, male, white, stage:Stage IVA, dead, 107 days	905.3
TCGA-CV-A6JE-01A	78 years, male, white, stage:'--, alive, 1075 days	897.2
TCGA-CX-7082-01A	82 years, male, white, stage:Stage IVA, dead, 11 days	888.0
TCGA-CN-4739-01A	71 years, male, white, stage:Stage IVA, dead, 1394 days	887.9
TCGA-QK-A6IG-01A	69 years, male, white, stage:Stage III, dead, 222 days	882.3
TCGA-CR-6473-01A	68 years, male, white, stage:'--, alive, 1125 days	877.6
TCGA-D6-6827-01A	55 years, female, white, stage:Stage I, alive, 568 days	871.9
TCGA-CN-A49C-01A	67 years, male, white, stage:'--, alive, 645 days	871.4
TCGA-CQ-5324-01A	59 years, male, white, stage:Stage III, alive, 1593 days	870.7
TCGA-HD-7831-01A	74 years, male, white, stage:Stage IVA, alive, 667 days	868.5
TCGA-CV-6948-01A	79 years, female, white, stage:Stage IVB, dead, 1289 days	867.8
TCGA-CV-7103-01A	49 years, male, white, stage:Stage IVA, dead, 1591 days	862.6
TCGA-CV-7424-01A	67 years, male, asian, stage:Stage IVA, dead, 453 days	861.7
TCGA-BB-A5HU-01A	47 years, male, white, stage:Stage IVA, alive, 782 days	830.9
TCGA-CV-6950-01A	64 years, male, white, stage:Stage IVA, dead, 459 days	820.2
TCGA-CV-7177-01A	82 years, female, white, stage:Stage II, dead, 663 days	817.2
TCGA-CN-4742-01A	48 years, female, white, stage:Stage IVA, dead, 397 days	813.9
TCGA-C9-A480-01A	45 years, female, asian, stage:Stage III, alive, 386 days	812.4
TCGA-D6-8568-01A	62 years, male, white, stage:Stage II, alive, 759 days	798.4
TCGA-CV-7418-01A	62 years, male, black or african american, stage:Stage IVA, dead, 789 days	794.2
TCGA-TN-A7HI-01A	56 years, male, white, stage:Stage IVA, alive, 412 days	792.0
TCGA-CV-7440-01A	38 years, male, white, stage:Stage II, dead, 675 days	787.1
TCGA-CQ-7072-01A	51 years, male, white, stage:Stage II, alive, 2359 days	782.6
TCGA-CV-5436-01A	65 years, male, stage:Stage IVA, dead, 584 days	779.7
TCGA-CR-7364-01A	66 years, male, white, stage:Stage III, alive, 1435 days	775.4
TCGA-CV-7095-01A	87 years, female, stage:Stage II, dead, 572 days	775.0
TCGA-BA-A4IG-01A	77 years, male, white, stage:'--, alive, 855 days	762.7
TCGA-CV-A463-01A	82 years, female, white, stage:Stage IVA, dead, 23 days	759.1
TCGA-CR-7374-01A	67 years, female, white, stage:'--, alive, 30 days	755.1
TCGA-CQ-6218-01A	52 years, female, white, stage:Stage IVA, alive, 1253 days	754.3
TCGA-CV-A6JN-01A	53 years, male, white, stage:'--, alive, 906 days	752.8
TCGA-BB-4228-01A	50 years, male, white, stage:Stage III, alive, 559 days	751.1
TCGA-CV-7422-01A	60 years, female, white, stage:Stage IVA, dead, 1037 days	746.0
TCGA-CV-6941-01A	51 years, male, white, stage:Stage III, dead, 342 days	743.2
TCGA-CN-4737-01A	19 years, male, white, stage:Stage IVA, alive, 625 days	742.5
TCGA-CV-A6JT-01A	65 years, male, white, stage:Stage II, alive, 852 days	735.4
TCGA-CR-7379-01A	78 years, female, white, stage:Stage IVA, alive, 1036 days	725.1
TCGA-BA-A8YP-01A	50 years, male, black or african american, stage:Stage IVB, alive, 499 days	721.5
TCGA-BA-A6DG-01A	49 years, male, white, stage:'--, dead, 69 days	717.5
TCGA-HD-8224-01A	63 years, male, white, stage:Stage IVA, dead, 446 days	717.2
TCGA-CR-7369-01A	59 years, male, white, stage:Stage IVA, dead, 1090 days	716.8
TCGA-CV-5432-01A	68 years, male, white, stage:Stage III, alive, 3930 days	714.9
TCGA-D6-A6EK-01A	67 years, male, white, stage:Stage III, alive, 875 days	688.8
TCGA-CX-7086-01A	53 years, male, black or african american, stage:Stage III, alive, 573 days	681.9
TCGA-DQ-5631-01A	52 years, male, white, stage:'--, dead, 548 days	673.5
TCGA-WA-A7H4-01A	69 years, male, white, stage:Stage II, alive, 443 days	664.8
TCGA-CV-5976-01A	50 years, male, white, stage:Stage IVA, alive, 1478 days	660.8
TCGA-CN-6992-01A	61 years, male, white, stage:Stage IVA, alive, 1066 days	660.6
TCGA-HD-8634-01A	51 years, female, white, stage:Stage I, dead, 385 days	656.5
TCGA-CV-A6JU-01A	61 years, female, white, stage:Stage IVB, alive, 110 days	655.9
TCGA-P3-A5QF-01A	49 years, male, white, stage:Stage IVA, dead, 330 days	654.5
TCGA-HD-A6I0-01A	56 years, male, white, stage:Stage IVA, alive, 210 days	654.4
TCGA-CQ-5332-01A	87 years, male, white, stage:Stage III, dead, 317 days	649.0
TCGA-CR-7365-01A	60 years, male, white, stage:Stage IVA, alive, 1191 days	646.4
TCGA-CV-7437-01A	77 years, male, stage:Stage II, dead, 506 days	645.1
TCGA-UF-A71B-01A	50 years, male, white, stage:Stage IVA, alive, 1506 days	638.1
TCGA-CN-6011-01A	57 years, male, white, stage:Stage IVA, alive, 933 days	630.0
TCGA-CR-7372-01A	45 years, male, white, stage:Stage I, alive, 759 days	629.0
TCGA-KU-A6H8-01A	41 years, male, white, stage:Stage IVA, dead, 327 days	622.3
TCGA-CN-5355-01A	64 years, male, black or african american, stage:Stage IVA, alive, 1278 days	620.8
TCGA-CV-7434-01A	64 years, male, white, stage:Stage IVA, dead, 218 days	619.8
TCGA-CR-7398-01A	53 years, female, white, stage:Stage II, alive, 156 days	616.2
TCGA-HD-A4C1-01A	41 years, female, black or african american, stage:Stage IVA, alive, 11 days	606.4
TCGA-HD-7753-01A	62 years, male, black or african american, stage:Stage I, alive, 866 days	604.6
TCGA-CV-A6K2-01A	79 years, male, white, stage:Stage IVA, dead, 317 days	600.4
TCGA-UF-A7JA-01A	66 years, female, white, stage:Stage IVA, alive, 2265 days	596.0
TCGA-CV-6935-01A	67 years, male, white, stage:Stage IVA, dead, 295 days	591.5
TCGA-CV-A45O-01A	57 years, male, white, stage:'--, alive, 851 days	590.0
TCGA-CV-7406-01A	49 years, male, white, stage:Stage II, dead, 1748 days	589.8
TCGA-CN-5356-01A	56 years, male, white, stage:Stage III, alive, 1409 days	589.1
TCGA-CQ-A4C9-01A	56 years, male, stage:Stage III, alive, 707 days	580.2
TCGA-H7-8502-01A	50 years, male, white, stage:Stage IVA, alive, 458 days	579.6
TCGA-CV-6953-01A	80 years, female, white, stage:Stage III, dead, 1641 days	578.2
TCGA-MT-A67D-01A	55 years, male, white, stage:Stage II, alive, 56 days	577.8
TCGA-H7-A6C4-01A	35 years, female, white, stage:Stage IVA, dead, 414 days	574.9
TCGA-HD-8635-01A	61 years, female, white, stage:Stage III, alive, 695 days	574.8
TCGA-CV-7446-01A	66 years, male, white, stage:Stage IVA, dead, 1093 days	573.0
TCGA-BA-6872-01A	47 years, male, white, stage:'--, dead, 384 days	572.8
TCGA-QK-A64Z-01A	79 years, female, white, stage:Stage IVA, dead, 641 days	567.8
TCGA-F7-8298-01A	58 years, male, white, stage:Stage I, alive, 995 days	566.7
TCGA-CV-7414-01A	78 years, male, white, stage:Stage IVA, dead, 14 days	557.5
TCGA-CQ-A4CE-01A	76 years, female, stage:Stage II, alive, 897 days	549.8
TCGA-CV-6441-01A	60 years, male, white, stage:Stage III, dead, 292 days	545.2
TCGA-QK-A8ZB-01A	68 years, male, black or african american, stage:Stage IVA, alive, 542 days	544.5
TCGA-CN-4729-01A	73 years, male, white, stage:Stage III, alive, 392 days	544.1
TCGA-CV-5441-01A	58 years, male, white, stage:Stage IVA, alive, 2886 days	542.3
TCGA-F7-A50J-01A	67 years, female, white, stage:Stage III, alive, 947 days	541.8
TCGA-CV-7568-01A	48 years, female, white, stage:Stage IVA, dead, 927 days	541.5
TCGA-CV-6960-01A	49 years, male, black or african american, stage:Stage III, dead, 862 days	537.0
TCGA-P3-A6T5-01A	79 years, female, white, stage:Stage IVA, dead, 882 days	531.0
TCGA-CN-A63W-01A	48 years, female, white, stage:Stage IVA, dead, 377 days	528.3
TCGA-P3-A6T7-01A	55 years, male, white, stage:Stage IVA, dead, 487 days	527.6
TCGA-CV-7421-01A	76 years, male, white, stage:Stage IVA, dead, 2 days	523.6
TCGA-P3-A5Q6-01A	49 years, male, white, stage:Stage IVA, dead, 480 days	519.0
TCGA-C9-A47Z-01A	72 years, female, asian, stage:Stage III, dead, 191 days	518.6
TCGA-CQ-7069-01A	77 years, female, white, stage:Stage II, alive, 1274 days	515.4
TCGA-CV-7250-01A	64 years, male, white, stage:Stage IVA, dead, 2900 days	514.0
TCGA-MZ-A6I9-01A	68 years, male, white, stage:'--, dead, 489 days	510.4
TCGA-BA-6870-01A	60 years, female, black or african american, stage:'--, dead, 451 days	507.2
TCGA-CV-6940-01A	80 years, female, white, stage:Stage III, dead, 804 days	506.5
TCGA-D6-A4Z9-01A	59 years, male, white, stage:Stage IVA, alive, 539 days	501.0
TCGA-CN-6997-01A	66 years, male, white, stage:Stage IVA, dead, 988 days	498.4
TCGA-CN-6021-01A	63 years, female, white, stage:'--, dead, 276 days	497.5
TCGA-T2-A6WZ-01A	53 years, male, white, stage:'--, dead, 484 days	494.6
TCGA-BA-A4II-01A	46 years, male, white, stage:Stage II, alive, 918 days	489.9
TCGA-CV-A45U-01A	59 years, male, white, stage:Stage IVA, dead, 1079 days	484.1
TCGA-CN-4722-01A	61 years, female, white, stage:Stage II, alive, 1483 days	481.7
TCGA-CR-6493-01A	69 years, male, black or african american, stage:Stage IVA, dead, 282 days	477.4
TCGA-P3-A6T2-01A	45 years, male, white, stage:Stage IVA, alive, 2298 days	454.4
TCGA-BB-4224-01A	52 years, male, white, stage:Stage IVA, alive, 278 days	453.2
TCGA-BA-A6DE-01A	70 years, female, white, stage:Stage II, alive, 440 days	449.6
TCGA-CQ-6228-01A	71 years, female, white, stage:Stage IVA, dead, 456 days	445.4
TCGA-D6-A74Q-01A	67 years, male, white, stage:Stage IVA, alive, 710 days	443.0
TCGA-CV-7432-01A	79 years, male, white, stage:Stage II, dead, 2570 days	439.2
TCGA-CN-A63V-01A	59 years, male, white, stage:Stage IVA, alive, 679 days	429.5
TCGA-UF-A71A-01A	67 years, male, white, stage:Stage IVA, dead, 86 days	425.4
TCGA-UF-A7JS-01A	59 years, male, white, stage:Stage IVA, dead, 680 days	425.1
TCGA-QK-AA3J-01A	69 years, male, black or african american, stage:Stage I, alive, 466 days	419.5
TCGA-F7-A623-01A	70 years, male, white, stage:Stage IVA, alive, 616 days	415.2
TCGA-CV-5979-01A	26 years, male, white, stage:Stage IVA, alive, 1315 days	414.7
TCGA-CN-6998-01A	53 years, male, white, stage:Stage IVA, dead, 357 days	414.0
TCGA-BB-A6UO-01A	61 years, female, white, stage:Stage IVA, dead, 268 days	412.2
TCGA-MT-A67A-01A	85 years, female, white, stage:Stage I, alive, 914 days	410.6
TCGA-CV-5977-01A	66 years, male, white, stage:Stage IVA, alive, 1840 days	403.4
TCGA-CV-A6K1-01A	65 years, male, white, stage:Stage IVA, alive, 685 days	401.8
TCGA-D6-A6EP-01A	62 years, male, white, stage:Stage III, alive, 424 days	399.6
TCGA-UF-A7JD-01A	71 years, male, stage:Stage IVA, dead, 739 days	399.1
TCGA-CV-7245-01A	62 years, male, white, stage:Stage IVA, alive, 797 days	397.1
TCGA-P3-A6T6-01A	53 years, male, white, stage:Stage IVA, dead, 395 days	394.3
TCGA-CN-A6V7-01A	40 years, male, white, stage:Stage IVA, alive, 594 days	385.6
TCGA-D6-6823-01A	50 years, male, white, stage:Stage II, alive, 701 days	384.3
TCGA-CV-5440-01A	52 years, male, white, stage:Stage IVA, alive, 3270 days	383.5
TCGA-CV-7411-01A	64 years, female, white, stage:Stage IVA, dead, 2717 days	380.0
TCGA-CR-6472-01A	59 years, male, white, stage:'--, alive, 1050 days	375.0
TCGA-P3-A6T4-01A	54 years, male, white, stage:Stage IVA, dead, 62 days	374.3
TCGA-CV-7253-01A	58 years, male, black or african american, stage:Stage IVA, dead, 361 days	368.8
TCGA-UF-A71D-01A	54 years, female, white, stage:Stage IVA, alive, 1461 days	364.7
TCGA-CN-6988-01A	47 years, male, white, stage:Stage IVA, alive, 318 days	361.7
TCGA-MT-A51X-01A	30 years, male, white, stage:Stage IVA, alive, 242 days	348.0
TCGA-BB-A5HY-01A	64 years, male, white, stage:Stage IVA, dead, 321 days	345.3
TCGA-F7-A61V-01A	54 years, male, white, stage:Stage II, alive, 759 days	344.1
TCGA-CV-6003-01A	50 years, female, white, stage:Stage III, alive, 1665 days	340.1
TCGA-TN-A7HJ-01A	51 years, male, white, stage:Stage IVA, alive, 403 days	339.5
TCGA-D6-A4ZB-01A	61 years, male, white, stage:Stage III, alive, 376 days	339.5
TCGA-IQ-7632-01A	68 years, female, white, stage:Stage IVA, alive, 441 days	336.1
TCGA-CV-5435-01A	57 years, male, white, stage:Stage IVA, dead, 2319 days	332.9
TCGA-CR-6491-01A	60 years, male, black or african american, stage:Stage IVA, alive, 693 days	328.7
TCGA-QK-A8Z7-01A	59 years, male, black or african american, stage:Stage IVA, alive, 392 days	323.0
TCGA-CN-A641-01A	47 years, male, white, stage:Stage IVA, alive, 367 days	322.5
TCGA-KU-A66S-01A	69 years, female, white, stage:Stage III, dead, 406 days	320.2
TCGA-P3-A6T8-01A	54 years, male, white, stage:Stage IVA, alive, 400 days	318.4
TCGA-UF-A719-01A	54 years, male, stage:Stage II, alive, 1663 days	312.9
TCGA-CR-7390-01A	67 years, male, white, stage:Stage IVA, alive, 1508 days	308.0
TCGA-CN-4726-01A	68 years, male, white, stage:Stage IVA, dead, 142 days	303.5
TCGA-CQ-A4CG-01A	78 years, female, white, stage:Stage III, dead, 430 days	297.4
TCGA-BA-A4IF-01A	59 years, male, white, stage:'--, alive, 895 days	291.7
TCGA-IQ-A61H-01A	76 years, male, white, stage:Stage II, alive, 1138 days	290.0
TCGA-CV-A45X-01A	47 years, male, white, stage:Stage IVA, dead, 198 days	289.2
TCGA-CV-7180-01A	34 years, male, white, stage:Stage II, dead, 327 days	285.3
TCGA-BA-A6D8-01A	59 years, male, black or african american, stage:Stage IVA, alive, 850 days	278.1
TCGA-CQ-A4CH-01A	58 years, male, asian, stage:Stage II, dead, 379 days	278.0
TCGA-CN-4725-01A	60 years, male, white, stage:Stage II, alive, 1157 days	276.4
TCGA-CV-7247-01A	55 years, male, white, stage:Stage III, dead, 577 days	274.6
TCGA-BA-A6DL-01A	59 years, male, white, stage:'--, alive, 623 days	271.2
TCGA-HD-A633-01A	74 years, male, white, stage:Stage IVA, alive, 421 days	264.5
TCGA-CV-A45P-01A	82 years, female, white, stage:Stage I, alive, 639 days	263.1
TCGA-BA-4075-01A	49 years, male, black or african american, stage:Stage III, dead, 283 days	259.9
TCGA-WA-A7GZ-01A	58 years, male, white, stage:'--, dead, 625 days	254.8
TCGA-QK-A6IH-01A	65 years, female, white, stage:Stage IVB, alive, 653 days	253.2
TCGA-CV-A6JY-01A	69 years, male, white, stage:Stage IVA, alive, 646 days	245.9
TCGA-CV-6945-01A	41 years, male, white, stage:Stage IVA, dead, 366 days	243.5
TCGA-DQ-5629-01A	64 years, male, white, stage:'--, dead, 941 days	238.6
TCGA-IQ-A61G-01A	57 years, male, white, stage:Stage IVA, alive, 360 days	237.9
TCGA-BB-4227-01A	66 years, male, white, stage:Stage IVA, alive, 134 days	233.6
TCGA-BA-4076-01A	39 years, male, white, stage:'--, dead, 415 days	226.8
TCGA-CV-6951-01A	57 years, male, white, stage:Stage IVA, dead, 915 days	219.6
TCGA-F7-A61W-01A	51 years, male, asian, stage:Stage IVA, alive, 14 days	216.8
TCGA-CV-A45Q-01A	69 years, female, white, stage:'--, dead, 5152 days	215.9
TCGA-BA-4074-01A	69 years, male, white, stage:Stage IVA, dead, 462 days	209.8
TCGA-CN-6024-01A	66 years, male, white, stage:Stage IVA, dead, 337 days	209.6
TCGA-CN-A49A-01A	60 years, male, white, stage:Stage IVB, dead, 526 days	208.2
TCGA-BA-7269-01A	61 years, male, white, stage:Stage III, alive, 1273 days	206.9
TCGA-CN-A63U-01A	50 years, male, white, stage:Stage IVA, alive, 964 days	202.4
TCGA-CQ-A4CI-01A	73 years, male, white, stage:Stage III, alive, 950 days	195.6
TCGA-IQ-A6SG-01A	61 years, female, white, stage:Stage III, alive, 579 days	195.2
TCGA-CV-7423-01A	65 years, male, white, stage:Stage II, dead, 3059 days	192.9
TCGA-CV-A465-01A	24 years, male, white, stage:Stage III, dead, 215 days	192.3
TCGA-D6-A6EO-01A	44 years, male, white, stage:Stage IVA, alive, 759 days	180.4
TCGA-HD-A634-01A	56 years, male, white, stage:Stage IVA, dead, 130 days	178.6
TCGA-UF-A71E-01A	63 years, male, white, stage:Stage IVA, dead, 1504 days	176.1
TCGA-BB-A5HZ-01A	65 years, male, white, stage:Stage IVA, alive, 827 days	174.9
TCGA-P3-A6T3-01A	49 years, male, white, stage:Stage IVA, dead, 577 days	173.8
TCGA-CV-5442-01A	76 years, female, white, stage:Stage IVA, alive, 2327 days	173.4
TCGA-CQ-7065-01A	40 years, male, asian, stage:Stage II, alive, 1628 days	171.5
TCGA-CV-7430-01A	56 years, male, white, stage:Stage IVA, dead, 495 days	170.9
TCGA-BA-A6DA-01A	41 years, female, white, stage:Stage IVA, alive, 351 days	158.6
TCGA-CQ-6225-01A	65 years, male, white, stage:Stage III, dead, 403 days	153.5
TCGA-P3-A6T0-01A	47 years, female, white, stage:Stage IVA, alive, 578 days	151.2
TCGA-CV-A6JM-01A	85 years, male, white, stage:'--, dead, 194 days	147.7
TCGA-CV-6962-01A	65 years, male, white, stage:Stage IVA, dead, 126 days	146.0
TCGA-IQ-7631-01A	60 years, female, white, stage:Stage II, alive, 1172 days	145.3
TCGA-QK-A8ZA-01A	60 years, male, black or african american, stage:'--, dead, 371 days	144.4
TCGA-CN-4730-01A	62 years, male, white, stage:Stage IVA, alive, 817 days	141.0
TCGA-CR-5247-01A	48 years, male, black or african american, stage:'--, alive, 358 days	130.6
TCGA-QK-A6VB-01A	66 years, male, white, stage:Stage IVA, alive, 641 days	130.4
TCGA-CV-7255-01A	32 years, female, white, stage:Stage IVA, dead, 64 days	123.4
TCGA-UF-A7JC-01A	42 years, male, white, stage:Stage IVA, dead, 546 days	116.2
TCGA-CV-7183-01A	53 years, male, white, stage:Stage II, alive, 3981 days	114.9
TCGA-UF-A7JK-01A	59 years, male, stage:Stage IVA, dead, 424 days	113.4
TCGA-D6-A6ES-01A	50 years, male, white, stage:Stage IVA, alive, 389 days	109.0
TCGA-P3-A5QA-01A	41 years, male, stage:Stage I, alive, 2182 days	106.3
TCGA-F7-A622-01A	75 years, male, white, stage:Stage III, dead, 359 days	99.9
TCGA-CN-4727-01A	56 years, male, white, stage:Stage IVA, alive, 1560 days	97.6
TCGA-KU-A66T-01A	53 years, female, white, stage:Stage IVA, alive, 552 days	90.0
TCGA-P3-A6SX-01A	67 years, male, white, stage:Stage III, dead, 1430 days	80.2
TCGA-MZ-A7D7-01A	51 years, male, white, stage:Stage IVA, alive, 547 days	59.1
TCGA-BB-8601-01A	84 years, male, black or african american, stage:Stage III, alive, 624 days	47.1
TCGA-DQ-7588-01A	66 years, male, white, stage:'--, dead, 427 days	19.8
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
CPT0194960003	Tumor	2.0
CPT0236850004	Tumor	1.5
CPT0184530003	Tumor	1.3
CPT0163600003	Tumor	1.1
CPT0088410003	Tumor	1.1
CPT0176770003	Tumor	0.9
CPT0177010003	Tumor	0.8
CPT0194790003	Tumor	0.8
CPT0207870004	Tumor	0.8
CPT0163090003	Tumor	0.7
CPT0163650003	Tumor	0.7
CPT0013430003	Tumor	0.7
CPT0163800003	Normal	0.6
CPT0196040003	Tumor	0.6
CPT0243140004	Normal	0.6
CPT0201830004	Tumor	0.6
CPT0226030003	Tumor	0.6
CPT0226250004	Tumor	0.6
CPT0241980004	Tumor	0.6
CPT0250310003	Tumor	0.6
CPT0245130003	Tumor	0.6
CPT0245300003	Tumor	0.5
CPT0281470002	Normal	0.5
C3N-01620-05	Normal	0.5
CPT0243090003	Tumor	0.5
CPT0163720003	Normal	0.5
CPT0244890004	Tumor	0.5
CPT0246620003	Tumor	0.4
CPT0088430003	Normal	0.4
CPT0087990003	Tumor	0.4
CPT0220610003	Tumor	0.4
CPT0163910003	Tumor	0.4
CPT0177390003	Tumor	0.4
CPT0199710003	Normal	0.4
CPT0226440003	Tumor	0.4
CPT0095040003	Tumor	0.4
CPT0177200003	Tumor	0.4
CPT0222180003	Tumor	0.3
CPT0278700002	Normal	0.3
CPT0177710003	Tumor	0.3
CPT0169730003	Tumor	0.3
C3N-04275-05	Normal	0.3
CPT0008630003	Tumor	0.3
CPT0237500003	Normal	0.3
CPT0245400003	Tumor	0.3
CPT0245180003	Tumor	0.3
CPT0226130003	Tumor	0.3
CPT0199820003	Tumor	0.3
CPT0223450003	Tumor	0.3
CPT0236620003	Tumor	0.2
CPT0194800003	Normal	0.2
CPT0220620003	Normal	0.2
CPT0226390003	Tumor	0.2
CPT0024810003	Tumor	0.2
CPT0194420003	Tumor	0.2
CPT0163530003	Tumor	0.2
CPT0011290003	Tumor	0.2
CPT0163340003	Tumor	0.1
CPT0013250003	Normal	0.1
CPT0163480003	Tumor	0.1
CPT0245730003	Tumor	0.1
CPT0169890003	Tumor	0.0
CPT0245560003	Normal	0.0
CPT0169640003	Tumor	0.0
CPT0123260003	Tumor	0.0
CPT0248350003	Normal	0.0
CPT0163860003	Normal	0.0
CPT0245450003	Tumor	0.0
CPT0261520003	Tumor	0.0
CPT0094280004	Tumor	-0.1
CPT0088080003	Normal	-0.1
CPT0246540003	Tumor	-0.1
CPT0244940004	Tumor	-0.1
CPT0163840003	Tumor	-0.1
CPT0201860004	Normal	-0.1
CPT0194260003	Normal	-0.1
CPT0008520008	Tumor	-0.1
CPT0163410003	Tumor	-0.1
CPT0163430003	Normal	-0.1
CPT0013460003	Normal	-0.1
CPT0084650004	Normal	-0.2
CPT0235470002	Normal	-0.2
CPT0094560004	Tumor	-0.2
C3N-01859-04	Normal	-0.2
CPT0245350003	Tumor	-0.2
CPT0008930003	Tumor	-0.2
CPT0013210004	Tumor	-0.2
CPT0245550003	Tumor	-0.2
CPT0226090003	Normal	-0.2
CPT0163240003	Tumor	-0.2
CPT0190860003	Normal	-0.2
CPT0199880003	Tumor	-0.2
CPT0245010003	Tumor	-0.2
CPT0229220002	Normal	-0.3
CPT0236640003	Normal	-0.3
CPT0163250003	Normal	-0.3
CPT0190850003	Tumor	-0.3
CPT0222200003	Normal	-0.3
CPT0195860003	Tumor	-0.3
CPT0245140003	Normal	-0.3
CPT0088010003	Normal	-0.3
CPT0237130004	Tumor	-0.3
CPT0163740003	Tumor	-0.4
CPT0236870003	Normal	-0.4
CPT0195680003	Tumor	-0.4
CPT0163160003	Tumor	-0.4
CPT0237150003	Normal	-0.4
CPT0163170003	Normal	-0.4
CPT0237640003	Normal	-0.4
CPT0237620004	Tumor	-0.4
CPT0013000004	Tumor	-0.4
CPT0242000004	Normal	-0.5
CPT0245410003	Normal	-0.5
CPT0094580003	Normal	-0.5
CPT0199830003	Normal	-0.5
CPT0013130003	Tumor	-0.5
CPT0127050003	Tumor	-0.5
CPT0123180003	Tumor	-0.5
CPT0256560003	Tumor	-0.6
CPT0245190003	Normal	-0.6
C3N-00295-05	Normal	-0.6
CPT0011130005	Tumor	-0.6
CPT0199700003	Tumor	-0.6
CPT0163610003	Normal	-0.6
CPT0084630009	Tumor	-0.6
CPT0226270003	Normal	-0.6
CPT0088060004	Tumor	-0.7
CPT0245060004	Tumor	-0.7
CPT0226400003	Normal	-0.7
CPT0169920003	Normal	-0.7
CPT0223460003	Normal	-0.7
CPT0245020003	Normal	-0.7
C3N-01758-04	Normal	-0.7
CPT0123190003	Normal	-0.7
CPT0162990004	Tumor	-0.7
CPT0245230004	Tumor	-0.8
CPT0246670003	Tumor	-0.8
CPT0087820003	Tumor	-0.8
CPT0226450003	Normal	-0.8
CPT0162890003	Tumor	-0.8
CPT0248520003	Tumor	-0.8
CPT0245460003	Normal	-0.8
C3N-04276-06	Normal	-0.8
CPT0246590003	Tumor	-0.8
C3N-00857-05	Normal	-0.9
CPT0245630003	Tumor	-0.9
C3N-04279-05	Normal	-0.9
CPT0248330003	Tumor	-0.9
CPT0222360003	Tumor	-0.9
CPT0223970003	Tumor	-0.9
CPT0123280003	Normal	-1.0
CPT0226350003	Normal	-1.0
CPT0163490003	Normal	-1.0
CPT0237480004	Tumor	-1.0
CPT0094420004	Tumor	-1.0
CPT0235910003	Tumor	-1.0
CPT0196210003	Tumor	-1.0
CPT0013030003	Normal	-1.0
CPT0195700003	Normal	-1.1
CPT0169740004	Normal	-1.1
CPT0245600003	Tumor	-1.1
C3N-02693-06	Normal	-1.1
CPT0163790003	Tumor	-1.1
CPT0195880003	Normal	-1.1
CPT0199890003	Normal	-1.1
CPT0177220003	Normal	-1.1
CPT0094490004	Tumor	-1.1
CPT0163020003	Normal	-1.2
CPT0245500003	Tumor	-1.2
CPT0196060003	Normal	-1.2
CPT0235460003	Tumor	-1.3
CPT0245680003	Tumor	-1.3
CPT0094350004	Tumor	-1.3
CPT0235920003	Normal	-1.3
CPT0194250003	Tumor	-1.4
CPT0162940003	Tumor	-1.5
CPT0226340003	Tumor	-1.6
CPT0008960003	Normal	-1.6
CPT0011320003	Normal	-1.7
CPT0229230003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0229210003	Tumor	N/A
CPT0229190003	Tumor	N/A
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HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA010592	Antibody CAB002506	Antibody CAB079994
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Adenocarcinoma, NOS Adenoma, NOS
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS Squamous cell carcinoma, metastatic, NOS