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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS20 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1470.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
8139.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4297.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
4038.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3315.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2841.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2717.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2589.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2386.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2371.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2335.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2263.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2116.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
2105.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
2090.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2089.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2067.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
2060.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2013.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
1994.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
1931.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
1899.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1870.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1859.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1833.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1736.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
1672.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1561.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
1390.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1354.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1286.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1272.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1251.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
1172.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1152.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1095.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1081.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
1067.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1065.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
976.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
943.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
916.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
899.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
830.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
701.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
670.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
603.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
585.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
478.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
443.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
429.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
378.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
374.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
368.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
364.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
350.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
337.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
326.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
323.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
310.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
270.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
248.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
233.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
194.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS20 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2623.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8270.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8233.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7637.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7439.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6658.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6396.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6367.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6212.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6151.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5958.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5791.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
5709.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
5551.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
5398.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
5384.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5219.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5112.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4978.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
4909.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4839.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4755.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4703.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4575.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4441.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4427.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
4418.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4386.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
4356.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4321.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
4306.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
4301.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4149.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
4148.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
4130.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
4121.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
4108.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4065.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4063.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
4063.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4032.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
4030.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
4023.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
4011.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
3960.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
3957.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
3931.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
3864.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
3843.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3793.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
3774.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
3759.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
3755.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3743.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
3736.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
3734.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
3732.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
3715.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3713.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
3712.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
3706.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
3703.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3691.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3687.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
3686.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3684.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
3682.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
3675.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
3661.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
3646.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3561.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3560.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
3557.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
3539.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
3521.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
3504.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
3503.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
3490.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3474.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
3471.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
3470.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3466.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
3451.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
3445.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
3413.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
3395.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
3394.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3393.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
3376.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
3355.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
3352.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
3341.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
3328.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
3325.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
3318.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
3318.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
3308.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
3305.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
3300.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
3268.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
3266.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
3264.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
3256.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
3254.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
3253.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
3248.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3247.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
3239.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
3232.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
3230.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
3228.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3223.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
3221.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
3193.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
3180.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
3175.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3172.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
3165.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
3154.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
3149.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
3147.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
3135.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
3133.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
3120.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
3120.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
3119.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
3114.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
3101.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
3096.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
3088.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
3084.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
3077.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
3074.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
3053.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
3029.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
3028.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
3025.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
3022.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
3020.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
3019.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
3005.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
2999.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
2997.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
2994.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
2980.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
2979.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
2975.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
2975.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
2972.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
2969.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
2963.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
2947.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
2939.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
2917.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
2912.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
2910.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
2902.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
2888.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
2874.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
2868.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
2858.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2849.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
2837.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
2836.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
2835.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
2832.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2829.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
2828.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
2818.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
2817.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
2803.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
2799.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
2790.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
2775.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
2772.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2772.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
2770.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
2766.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
2765.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
2751.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
2750.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
2748.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
2748.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
2745.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
2739.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
2739.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
2731.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
2724.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
2720.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
2703.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
2698.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
2693.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
2690.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
2678.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
2674.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
2673.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2672.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
2670.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
2667.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
2661.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
2658.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
2655.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
2653.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
2647.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
2643.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
2641.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
2640.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
2637.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
2636.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
2635.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2627.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2623.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
2622.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
2621.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
2620.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
2618.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
2616.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
2614.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
2605.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
2604.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
2603.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
2600.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
2593.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
2593.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2588.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
2588.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
2581.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
2580.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
2580.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
2571.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
2569.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
2569.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
2563.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
2563.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
2536.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
2531.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
2526.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
2522.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
2518.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
2510.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
2508.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
2505.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
2504.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
2496.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
2493.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
2493.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
2481.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
2463.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2462.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
2462.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
2461.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
2457.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
2456.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
2454.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
2453.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
2450.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
2441.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
2436.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
2433.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
2432.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
2426.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
2424.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
2417.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
2414.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
2414.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
2410.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
2406.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
2406.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
2405.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
2401.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
2400.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2399.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
2387.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
2383.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
2382.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
2380.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
2379.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
2376.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
2374.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
2371.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
2363.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
2359.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
2358.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
2357.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
2354.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
2353.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
2350.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
2349.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
2349.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
2347.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
2346.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
2346.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
2345.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
2337.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
2331.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2323.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
2314.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
2313.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
2309.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
2308.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
2298.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
2293.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
2290.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
2289.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
2288.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
2284.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
2283.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
2273.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
2265.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
2263.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
2252.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
2249.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
2248.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
2247.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
2246.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
2246.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
2243.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
2241.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
2239.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
2238.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
2236.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
2234.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
2232.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
2229.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
2228.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
2224.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
2217.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
2216.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
2216.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
2214.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
2205.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2200.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
2199.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
2198.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
2194.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
2184.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
2176.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
2168.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
2163.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
2162.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
2154.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
2153.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
2153.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2143.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
2141.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
2138.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
2138.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2137.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
2134.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
2126.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
2115.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
2113.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
2113.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
2109.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
2099.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
2093.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
2092.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
2083.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
2082.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
2081.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
2080.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
2077.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
2072.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
2072.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
2071.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
2067.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
2066.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
2060.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
2059.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
2057.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
2054.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
2053.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
2037.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
2035.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
2033.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
2033.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
2031.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2029.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
2028.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
2028.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
2028.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
2026.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
2023.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
2018.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
2012.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
2011.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
2008.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
2004.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
2000.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
1992.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
1986.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
1985.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
1977.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
1976.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
1974.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1970.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
1968.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
1954.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
1951.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
1948.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
1945.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
1945.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
1939.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
1934.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
1927.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
1925.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
1920.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
1918.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
1907.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
1899.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
1897.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
1889.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
1881.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
1877.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
1863.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
1858.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
1852.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
1851.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
1841.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1840.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
1837.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
1837.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
1823.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
1823.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
1820.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
1813.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
1810.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
1789.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
1788.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
1778.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
1777.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
1770.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
1770.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1769.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
1766.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
1760.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1759.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
1756.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1749.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
1746.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
1745.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
1738.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
1731.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
1720.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
1720.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
1717.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
1698.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
1685.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
1675.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
1674.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
1666.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
1664.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
1655.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
1649.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
1635.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
1632.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
1615.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
1615.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
1613.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
1612.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
1609.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
1604.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
1599.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
1599.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
1596.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
1596.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
1595.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
1579.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1565.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
1563.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
1546.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
1522.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
1513.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1510.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
1497.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
1494.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
1491.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
1478.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
1474.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
1474.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
1457.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
1453.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1438.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1431.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
1407.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
1383.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1378.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1371.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
1365.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
1360.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1357.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
1347.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
1344.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
1340.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
1332.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
1327.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
1325.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
1324.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
1323.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
1294.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
1293.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1267.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1263.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
1233.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
1230.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1224.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
1222.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
1212.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
1207.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
1203.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
1187.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1185.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
1154.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1141.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
1119.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1072.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
1059.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
1033.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
1016.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
995.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
988.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS20 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2264.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
5145.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
4974.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
4963.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
4071.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
3892.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
3647.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
3402.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
3402.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
3277.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
3239.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
3179.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
3152.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
3103.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
2959.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
2919.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
2864.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
2716.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
2696.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
2694.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
2690.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
2678.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
2640.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
2632.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
2606.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
2606.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
2572.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
2568.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
2552.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
2528.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
2489.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
2470.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
2467.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
2448.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
2392.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
2381.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
2351.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
2326.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
2295.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
2282.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
2269.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
2268.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
2254.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
2243.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
2237.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
2221.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
2194.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
2186.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
2175.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
2154.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
2138.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
2126.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
2091.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
2082.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
2071.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
2065.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
2063.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
2034.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
2026.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
2003.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
2000.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
1997.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
1993.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
1981.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
1979.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
1961.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
1955.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
1928.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
1911.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
1881.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
1834.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
1788.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
1781.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
1776.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
1763.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
1748.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
1724.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
1716.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
1693.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
1681.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
1668.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
1665.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
1659.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
1649.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
1647.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
1644.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
1622.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
1621.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
1588.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
1561.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
1448.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
1444.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
1421.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
1374.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
1361.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
1339.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
1300.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
1240.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
1029.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
1000.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS20 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2017.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6406.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
5934.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
5881.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5478.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5319.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5100.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4781.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4513.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
4468.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
4263.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
4192.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
4125.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
4063.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3986.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3911.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
3852.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
3819.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3752.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3697.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3680.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3663.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3613.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3566.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3554.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
3526.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3518.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3495.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3432.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
3404.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3388.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3364.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3334.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3307.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3291.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
3255.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
3254.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
3222.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3219.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
3216.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3216.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
3168.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3158.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3139.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3111.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3091.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
2986.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2963.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2932.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
2918.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
2915.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
2913.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
2913.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
2902.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2901.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
2887.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
2858.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
2839.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
2838.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
2812.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
2744.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
2729.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
2727.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2724.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
2712.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
2708.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
2691.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
2690.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
2683.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
2643.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
2636.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2630.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
2629.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
2609.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
2587.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
2573.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
2563.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2548.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2539.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
2514.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
2511.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
2497.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
2488.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2476.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2468.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2448.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
2437.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
2430.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
2429.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
2421.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
2420.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
2418.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
2410.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
2398.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
2396.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
2386.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2381.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
2375.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
2367.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
2334.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
2333.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
2323.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2292.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
2289.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
2283.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
2277.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
2266.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
2253.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
2244.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2242.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
2237.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
2234.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
2225.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2221.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2221.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
2219.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
2214.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
2212.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2205.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2204.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2198.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
2191.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
2188.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
2184.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
2181.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
2181.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
2171.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
2160.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
2157.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
2145.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
2140.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
2130.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
2130.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2128.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
2116.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
2072.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
2050.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
2046.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
2041.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
2034.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
2024.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
2018.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
2011.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
1992.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
1986.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1975.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
1974.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
1974.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
1972.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
1968.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
1964.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
1951.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
1921.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
1916.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
1901.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
1900.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
1898.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
1890.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
1888.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
1880.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
1880.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1834.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1833.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
1826.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
1820.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
1819.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
1817.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
1816.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
1808.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1802.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
1796.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1791.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
1778.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
1772.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
1766.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1736.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
1731.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
1728.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
1727.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
1715.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
1701.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
1701.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
1681.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
1675.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
1668.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
1627.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
1622.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
1596.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
1585.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
1576.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1566.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
1565.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
1555.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
1554.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
1551.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1530.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
1512.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
1494.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
1465.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1462.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
1435.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
1354.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
1340.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1337.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
1336.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
1333.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
1330.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
1301.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1299.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
1280.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
1277.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
1251.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1251.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1246.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
1209.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1202.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1170.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
1149.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
1147.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
1134.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1070.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
1032.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
1023.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
889.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
847.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
832.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
810.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
798.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
779.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
770.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
765.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
756.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
740.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
731.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
703.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
702.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
670.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
663.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
655.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
602.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
598.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
594.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
560.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
509.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
509.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
504.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
500.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
483.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
482.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
466.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
456.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
455.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
446.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
442.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
441.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
438.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
435.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
434.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
416.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
413.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
409.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
402.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
395.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
392.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
390.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
384.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
377.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
365.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
360.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
356.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
355.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
350.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
318.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
308.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
292.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
284.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
274.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
270.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
254.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
210.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
195.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
188.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
185.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.7
CPT0017410003
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0001180009
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0015810003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0088970003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0086030003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0025050003
Tumor
0.3
CPT0000780007
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0012670003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0063630003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0066470004
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0021240003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0066480003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0014130001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0002370001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0092800003
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0088920001
Normal
-0.2
CPT0092290003
Tumor
-0.2
CPT0023710001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0014160003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0088480003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0025580004
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0092740003
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0075560003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0079180003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
