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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS20 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2239.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
11595.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8640.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
7493.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
7114.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
6622.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
6414.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6290.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6202.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
6117.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
5906.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5666.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5571.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
5399.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5250.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
5236.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5097.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5041.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5031.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4802.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4776.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4674.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
4597.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
4580.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
4561.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
4377.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
4291.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
4231.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4176.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
4149.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
4131.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
4127.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
4118.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
4105.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
4099.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4035.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3978.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3923.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3887.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
3881.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3856.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
3801.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
3773.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
3726.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
3635.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
3588.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3543.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
3521.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
3521.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
3476.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3470.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3448.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
3427.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3399.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
3349.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3294.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3277.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
3271.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
3235.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
3208.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3061.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3050.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
3030.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
3013.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
3003.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3000.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
2993.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2980.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
2963.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2959.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2920.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
2912.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2909.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2889.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
2888.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2870.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2856.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
2835.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
2822.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
2807.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2801.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2754.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2736.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2713.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2710.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
2700.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2700.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2699.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
2694.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
2687.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
2685.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
2680.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2669.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2668.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2665.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2654.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
2642.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2636.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2615.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2614.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
2593.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2588.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
2572.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2570.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2548.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
2544.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2542.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2531.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2522.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2518.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
2512.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2507.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2486.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2469.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
2467.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
2464.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
2459.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2452.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2451.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
2449.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
2436.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
2434.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2434.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
2425.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
2419.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
2407.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
2399.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
2395.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2385.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
2380.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2359.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
2351.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2338.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2335.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2332.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2330.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
2327.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
2323.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
2296.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
2286.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2282.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
2280.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
2271.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
2269.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
2241.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
2223.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2193.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
2190.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
2189.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2143.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2120.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
2115.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2095.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2093.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
2087.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2077.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2071.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
2069.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2064.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
2062.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2056.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
2037.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
2035.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
2030.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
2026.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
2022.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
2021.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
2009.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2006.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2004.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1997.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1991.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1985.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1979.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1978.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1972.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1970.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1960.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1941.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1938.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
1929.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1912.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1910.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1906.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1903.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
1903.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1880.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1875.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1864.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1863.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1856.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1855.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
1840.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1826.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1809.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1804.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1797.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1796.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1791.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1786.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1773.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1770.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1761.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1755.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1754.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1752.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1749.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1744.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1742.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1740.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1730.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1726.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1720.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
1719.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1710.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1699.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1696.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1680.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1680.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1669.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1657.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1654.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1638.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1637.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1632.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1626.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1624.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1621.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1617.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1601.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1596.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1591.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1586.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1585.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1584.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1581.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1563.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1560.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1546.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1531.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1526.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
1517.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1512.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1510.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1496.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1485.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1477.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1470.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
1457.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1456.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
1451.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1445.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1442.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1434.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1434.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1428.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1423.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1419.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1416.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1395.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1393.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
1390.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1381.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1380.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1371.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1369.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1369.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
1366.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1363.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1361.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1356.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
1349.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
1345.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1331.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1322.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1321.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1308.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1304.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1298.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
1289.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1289.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1277.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1260.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1258.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
1252.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1234.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1228.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1227.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1226.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1205.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1203.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1197.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1197.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
1195.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1190.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
1181.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1170.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1167.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1165.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1163.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1160.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
1145.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1131.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1130.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
1123.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1121.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1114.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
1113.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1107.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
1085.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
1080.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1069.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1065.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1057.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1054.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1053.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1042.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
1040.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1038.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1037.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
1027.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1021.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1001.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
987.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
976.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
974.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
973.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
972.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
965.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
956.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
953.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
952.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
942.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
937.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
937.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
934.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
927.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
910.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
905.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
891.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
878.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
874.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
873.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
867.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
867.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
863.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
858.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
848.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
843.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
841.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
831.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
829.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
808.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
808.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
788.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
771.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
742.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
739.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
728.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
719.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
668.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
642.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS20 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1136.0
Number of samples
231
Samples
Sample
Description
TPM
DO50785
0 years, male, NA, stage:4, dead, 90 days
5790.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
5091.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
4784.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
4257.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
4120.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
3759.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
3347.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
2957.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
2938.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2854.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
2757.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
2581.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
2564.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2504.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
2419.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
2348.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
2345.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
2294.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
2294.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
2268.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
2253.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
2198.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
2118.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
2065.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
2025.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
1990.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
1983.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
1973.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
1939.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
1926.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
1903.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
1822.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
1816.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
1802.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
1737.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
1729.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
1729.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
1684.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
1673.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
1582.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
1559.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
1545.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
1544.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
1542.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
1521.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
1516.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
1479.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
1474.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
1464.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
1459.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
1441.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1421.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
1408.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
1407.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
1381.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
1375.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
1375.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1371.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
1361.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
1348.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
1333.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
1329.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
1300.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
1278.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
1273.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
1262.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1258.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
1252.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
1227.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
1225.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
1210.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
1189.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
1121.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
1113.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1112.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
1106.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
1096.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
1090.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
1086.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
1082.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1081.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
1077.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
1074.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1073.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
1069.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
1065.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
1064.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1059.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
1055.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
1050.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
1027.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1026.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
1026.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
1016.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
1015.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
1013.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
1011.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
1006.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
1001.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
998.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
993.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
980.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
974.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
970.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
965.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
963.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
960.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
955.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
948.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
937.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
935.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
934.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
927.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
920.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
917.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
904.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
895.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
890.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
880.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
877.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
868.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
863.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
863.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
860.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
857.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
847.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
846.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
840.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
839.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
836.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
830.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
829.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
818.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
818.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
815.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
811.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
808.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
806.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
801.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
799.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
797.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
795.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
784.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
781.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
774.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
772.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
761.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
745.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
741.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
739.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
720.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
718.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
713.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
707.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
705.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
704.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
702.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
698.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
695.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
685.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
679.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
670.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
666.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
664.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
655.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
654.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
652.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
651.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
643.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
640.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
636.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
634.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
626.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
620.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
606.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
599.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
591.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
589.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
584.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
576.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
574.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
569.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
568.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
562.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
560.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
555.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
554.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
551.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
549.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
548.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
542.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
530.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
528.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
526.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
524.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
524.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
522.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
509.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
500.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
499.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
498.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
497.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
484.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
472.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
470.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
469.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
462.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
460.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
458.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
446.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
443.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
442.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
440.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
440.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
429.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
424.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
413.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
407.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
403.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
396.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
390.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
383.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
377.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
374.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
373.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
362.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
350.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
347.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
342.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
325.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
265.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
537
Tumor
0.8
557
Tumor
0.7
965
Tumor
0.7
937
Tumor
0.6
951
Tumor
0.5
473
Tumor
0.5
957
Tumor
0.5
567
Tumor
0.5
285
Tumor
0.5
983
Tumor
0.5
1021
Tumor
0.4
523
Tumor
0.4
967
Tumor
0.4
815
Tumor
0.4
327
Tumor
0.4
131
Tumor
0.4
367
Tumor
0.4
533
Tumor
0.4
851
Tumor
0.4
1025
Tumor
0.4
545
Tumor
0.4
573
Tumor
0.4
745
Tumor
0.3
938
Normal
0.3
955
Tumor
0.3
223
Tumor
0.3
685
Tumor
0.3
743
Tumor
0.3
535
Tumor
0.3
697
Tumor
0.3
393
Tumor
0.3
952
Normal
0.3
981
Tumor
0.3
554
Normal
0.3
355
Tumor
0.3
1027
Tumor
0.3
661
Tumor
0.3
727
Tumor
0.3
953
Tumor
0.3
865
Tumor
0.3
913
Tumor
0.3
497
Tumor
0.3
525
Tumor
0.3
517
Tumor
0.3
1015
Tumor
0.3
737
Tumor
0.2
777
Tumor
0.2
471
Tumor
0.2
353
Tumor
0.2
518
Normal
0.2
944
Normal
0.2
923
Tumor
0.2
515
Tumor
0.2
1043
Tumor
0.2
331
Tumor
0.2
211
Tumor
0.2
746
Normal
0.2
387
Tumor
0.2
861
Tumor
0.2
966
Normal
0.2
922
Normal
0.2
527
Tumor
0.2
571
Tumor
0.2
943
Tumor
0.2
1026
Normal
0.2
413
Tumor
0.2
448
Normal
0.2
385
Tumor
0.2
785
Tumor
0.2
868
Normal
0.2
1031
Tumor
0.2
916
Normal
0.2
873
Tumor
0.2
723
Tumor
0.2
113
Tumor
0.2
956
Normal
0.2
778
Normal
0.2
467
Tumor
0.2
862
Normal
0.2
534
Normal
0.2
1032
Normal
0.2
755
Tumor
0.1
738
Normal
0.1
924
Normal
0.1
363
Tumor
0.1
135
Tumor
0.1
721
Tumor
0.1
443
Tumor
0.1
392
Normal
0.1
553
Tumor
0.1
492
Normal
0.1
474
Normal
0.1
617
Tumor
0.1
852
Normal
0.1
1014
Normal
0.1
817
Tumor
0.1
484
Normal
0.1
227
Tumor
0.1
421
Tumor
0.1
546
Normal
0.1
715
Tumor
0.1
864
Normal
0.1
724
Normal
0.1
915
Tumor
0.1
395
Tumor
0.1
187
Tumor
0.1
536
Normal
0.1
698
Normal
0.1
877
Tumor
0.1
1022
Normal
0.1
524
Normal
0.1
728
Normal
0.1
968
Normal
0.1
921
Tumor
0.1
1013
Tumor
0.1
866
Normal
0.1
558
Normal
0.1
823
Tumor
0.1
412
Normal
0.1
516
Normal
0.1
1028
Normal
0.1
267
Tumor
0.1
867
Tumor
0.1
568
Normal
0.1
695
Tumor
0.1
342
Normal
0.1
647
Tumor
0.1
214
Normal
0.1
427
Tumor
0.1
494
Normal
0.1
636
Normal
0.1
963
Tumor
0.1
526
Normal
0.1
142
Normal
0.1
878
Normal
0.1
686
Normal
0.1
147
Tumor
0.1
332
Normal
0.1
462
Normal
0.1
493
Tumor
0.1
1016
Normal
0.1
481
Tumor
0.1
1041
Tumor
0.1
975
Tumor
0.1
918
Normal
0.1
257
Tumor
0.0
196
Normal
0.0
514
Normal
0.0
696
Normal
0.0
128
Normal
0.0
466
Normal
0.0
813
Tumor
0.0
228
Normal
0.0
883
Tumor
0.0
477
Tumor
0.0
411
Tumor
0.0
212
Normal
0.0
445
Tumor
0.0
538
Normal
0.0
463
Tumor
0.0
483
Tumor
0.0
195
Tumor
0.0
858
Normal
0.0
284
Normal
0.0
487
Tumor
0.0
218
Normal
0.0
917
Tumor
0.0
528
Normal
0.0
136
Normal
0.0
213
Tumor
0.0
1044
Normal
0.0
513
Tumor
0.0
977
Tumor
0.0
925
Tumor
0.0
433
Tumor
0.0
982
Normal
0.0
881
Tumor
0.0
362
Normal
0.0
277
Tumor
0.0
742
Normal
0.0
451
Tumor
0.0
984
Normal
0.0
563
Tumor
0.0
376
Normal
0.0
431
Tumor
0.0
816
Normal
0.0
472
Normal
0.0
422
Normal
0.0
386
Normal
0.0
874
Normal
0.0
572
Normal
0.0
358
Normal
0.0
964
Normal
0.0
1042
Normal
0.0
138
Normal
0.0
171
Tumor
0.0
278
Normal
0.0
824
Normal
0.0
713
Tumor
0.0
222
Normal
0.0
186
Normal
0.0
461
Tumor
0.0
425
Tumor
0.0
716
Normal
0.0
452
Normal
0.0
344
Normal
0.0
434
Normal
0.0
491
Tumor
0.0
137
Tumor
0.0
447
Tumor
0.0
436
Normal
0.0
286
Normal
0.0
394
Normal
0.0
172
Normal
-0.1
352
Normal
-0.1
231
Tumor
-0.1
954
Normal
-0.1
283
Tumor
-0.1
926
Normal
-0.1
615
Tumor
-0.1
564
Normal
-0.1
415
Tumor
-0.1
635
Tumor
-0.1
217
Tumor
-0.1
145
Tumor
-0.1
446
Normal
-0.1
976
Normal
-0.1
663
Tumor
-0.1
272
Normal
-0.1
132
Normal
-0.1
343
Tumor
-0.1
958
Normal
-0.1
671
Tumor
-0.1
351
Tumor
-0.1
375
Tumor
-0.1
124
Normal
-0.1
185
Tumor
-0.1
191
Tumor
-0.1
313
Tumor
-0.1
882
Normal
-0.1
221
Tumor
-0.1
857
Tumor
-0.1
423
Tumor
-0.1
365
Tumor
-0.1
262
Normal
-0.1
396
Normal
-0.1
162
Normal
-0.1
111
Normal
-0.1
271
Tumor
-0.1
114
Normal
-0.1
366
Normal
-0.1
911
Tumor
-0.1
478
Normal
-0.1
978
Normal
-0.1
914
Normal
-0.1
628
Normal
-0.1
488
Normal
-0.1
465
Tumor
-0.1
468
Normal
-0.1
616
Normal
-0.1
148
Normal
-0.1
161
Tumor
-0.1
714
Normal
-0.1
818
Normal
-0.1
341
Tumor
-0.1
328
Normal
-0.1
112
Tumor
-0.1
356
Normal
-0.1
298
Normal
-0.1
357
Tumor
-0.1
232
Normal
-0.1
662
Normal
-0.2
311
Tumor
-0.2
188
Normal
-0.2
297
Tumor
-0.2
312
Normal
-0.2
126
Normal
-0.2
455
Tumor
-0.2
464
Normal
-0.2
125
Tumor
-0.2
664
Normal
-0.2
361
Tumor
-0.2
258
Normal
-0.2
414
Normal
-0.2
384
Normal
-0.2
618
Normal
-0.2
146
Normal
-0.2
391
Tumor
-0.2
574
Normal
-0.2
435
Tumor
-0.2
432
Normal
-0.2
388
Normal
-0.2
416
Normal
-0.2
141
Tumor
-0.2
863
Tumor
-0.2
456
Normal
-0.2
368
Normal
-0.2
722
Normal
-0.2
648
Normal
-0.2
268
Normal
-0.2
261
Tumor
-0.2
482
Normal
-0.2
1046
Normal
-0.2
354
Normal
-0.2
444
Normal
-0.2
314
Normal
-0.2
123
Tumor
-0.2
744
Normal
-0.2
756
Normal
-0.2
426
Normal
-0.2
814
Normal
-0.2
641
Tumor
-0.2
428
Normal
-0.3
424
Normal
-0.3
642
Normal
-0.3
364
Normal
-0.3
1045
Tumor
-0.3
498
Normal
-0.3
192
Normal
-0.3
224
Normal
-0.3
912
Normal
-0.3
741
Tumor
-0.3
383
Tumor
-0.3
127
Tumor
-0.3
786
Normal
-0.3
627
Tumor
-0.3
665
Tumor
-0.4
884
Normal
-0.4
666
Normal
-0.5
672
Normal
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
