We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
522.5
nTPM
FANTOM5:
372.7
Scaled Tags Per Million
Pig:
104.2
nTPM
Allen mouse:
7.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
522.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 168.2
2090
Male, age 80, both hemispheres
200.9
2301
Female, age 85, both hemispheres
159.9
1984
Male, age 76, both hemispheres
157.9
2188
Female, age 91, both hemispheres
154.0
Dorsal cochlear nucleus nTPM: 207.3
2058
Male, age 76, both hemispheres
336.9
2802
Male, age 74, right hemisphere
188.1
2187
Female, age 91, both hemispheres
186.3
2370
Male, age 61, both hemispheres
171.2
2378
Male, age 80, both hemispheres
153.8
Dorsal tegmental nucleus nTPM: 522.5
2358
Male, age 61, both hemispheres
1383.1
2083
Male, age 80, both hemispheres
290.2
1936
Male, age 76, left hemisphere
223.2
2326
Male, age 74, both hemispheres
193.7
Dorsolateral tegmental area nTPM: 309.8
2337
Male, age 61, both hemispheres
680.1
2654
Male, age 80, both hemispheres
277.3
2141
Male, age 76, both hemispheres
222.9
2360
Male, age 74, both hemispheres
213.5
2751
Female, age 85, both hemispheres
155.2
Kolliker-Fuse nucleus nTPM: 273.0
2315
Male, age 76, right hemisphere
433.6
2163
Male, age 80, both hemispheres
240.3
2793
Female, age 91, left hemisphere
145.0
Lateral lemniscal nuclei nTPM: 157.7
2746
Female, age 85, left hemisphere
203.4
2453
Male, age 74, right hemisphere
168.7
2169
Male, age 76, both hemispheres
145.6
2036
Male, age 80, both hemispheres
141.3
2320
Female, age 91, left hemisphere
129.7
Lateral parabrachial nucleus nTPM: 227.6
2790
Male, age 61, both hemispheres
242.0
2139
Female, age 85, right hemisphere
240.8
2792
Male, age 76, both hemispheres
226.7
2013
Male, age 80, both hemispheres
201.0
Lateral vestibular nucleus nTPM: 196.6
2311
Male, age 80, both hemispheres
201.5
2184
Male, age 76, both hemispheres
191.7
Locus coeruleus nTPM: 211.0
2123
Female, age 91, both hemispheres
242.3
1980
Male, age 76, both hemispheres
230.0
2162
Male, age 80, both hemispheres
218.9
2014
Male, age 55, unknown
210.8
2317
Female, age 72, unknown
208.4
2720
Male, age 74, both hemispheres
190.5
2788
Male, age 74, unknown
176.2
Medial parabrachial nucleus nTPM: 235.4
2156
Male, age 61, both hemispheres
434.4
2170
Female, age 91, both hemispheres
211.6
2786
Male, age 76, both hemispheres
188.7
2854
Male, age 80, both hemispheres
181.4
2463
Female, age 85, right hemisphere
161.0
Medial periolivary nuclei nTPM: 190.0
2171
Female, age 85, both hemispheres
239.9
2063
Male, age 76, both hemispheres
201.7
2791
Male, age 74, right hemisphere
194.0
2081
Male, age 80, both hemispheres
174.6
2458
Female, age 91, both hemispheres
139.7
Motor facial nucleus nTPM: 168.8
2365
Male, age 74, right hemisphere
192.9
2062
Male, age 76, both hemispheres
188.9
2697
Female, age 85, both hemispheres
179.7
2126
Male, age 61, both hemispheres
179.0
2795
Female, age 91, both hemispheres
138.6
2327
Male, age 80, both hemispheres
133.8
Motor trigeminal nucleus nTPM: 180.3
2335
Male, age 61, both hemispheres
218.4
2309
Male, age 76, both hemispheres
199.8
2560
Male, age 74, both hemispheres
169.1
2079
Male, age 80, both hemispheres
157.4
2321
Female, age 91, both hemispheres
156.7
Nuclei of the trapezoid body nTPM: 184.5
2735
Female, age 85, both hemispheres
244.2
1983
Male, age 76, both hemispheres
217.5
2159
Male, age 61, both hemispheres
163.6
2166
Male, age 80, both hemispheres
153.8
2368
Female, age 91, both hemispheres
143.3
Nucleus raphe magnus nTPM: 190.5
2172
Female, age 85, both hemispheres
269.3
2455
Male, age 74, both hemispheres
208.8
2051
Male, age 76, both hemispheres
191.3
2160
Male, age 61, both hemispheres
183.5
2328
Male, age 80, both hemispheres
147.8
2459
Female, age 91, both hemispheres
142.3
Paramedian reticular nucleus nTPM: 227.9
2057
Male, age 80, both hemispheres
304.4
2052
Male, age 76, both hemispheres
243.2
2050
Female, age 85, both hemispheres
198.3
2313
Male, age 61, both hemispheres
165.8
Pedunculopontine tegmental nucleus nTPM: 309.0
2338
Male, age 61, both hemispheres
511.3
2334
Male, age 80, both hemispheres
235.2
1921
Female, age 85, both hemispheres
180.6
Pontine nuclei nTPM: 198.8
2787
Female, age 85, both hemispheres
303.4
1863
Male, age 55, unknown
237.4
2109
Female, age 72, unknown
220.0
2115
Male, age 80, left hemisphere
187.6
2727
Male, age 61, right hemisphere
185.4
1968
Male, age 76, left hemisphere
160.7
2454
Male, age 74, left hemisphere
153.6
2319
Female, age 91, both hemispheres
142.5
Pontine raphe nucleus nTPM: 197.4
2122
Female, age 85, midline
203.8
2853
Male, age 76, midline
191.1
Posteroventral cochlear nucleus nTPM: 188.6
2070
Male, age 76, both hemispheres
282.8
2752
Female, age 85, both hemispheres
225.9
2341
Male, age 80, both hemispheres
153.9
2135
Female, age 91, both hemispheres
144.5
2371
Male, age 61, both hemispheres
135.8
Principal sensory trigeminal nucleus nTPM: 173.1
2324
Male, age 76, both hemispheres
212.3
2158
Male, age 61, both hemispheres
174.4
2008
Male, age 80, left hemisphere
170.0
2367
Female, age 91, left hemisphere
135.9
Reticular pontine nucleus, caudal nTPM: 167.8
2092
Male, age 76, both hemispheres
200.5
2332
Male, age 80, right hemisphere
161.1
2559
Male, age 74, both hemispheres
155.3
2457
Female, age 91, both hemispheres
154.4
Reticular pontine nucleus, oral nTPM: 186.9
1939
Male, age 80, both hemispheres
297.3
2012
Female, age 85, both hemispheres
187.9
2167
Male, age 76, both hemispheres
177.2
2361
Male, age 74, both hemispheres
143.2
2366
Female, age 91, both hemispheres
128.7
Reticulotegmental nucleus nTPM: 171.6
2325
Male, age 76, both hemispheres
185.1
2333
Male, age 80, both hemispheres
182.2
2322
Female, age 91, both hemispheres
168.5
2452
Male, age 74, both hemispheres
150.4
Spinal trigeminal nucleus, oral nTPM: 205.1
2737
Female, age 85, both hemispheres
243.0
1978
Male, age 76, both hemispheres
203.1
2164
Male, age 80, both hemispheres
169.1
Subcoeruleus area nTPM: 177.6
2323
Female, age 91, left hemisphere
209.4
1958
Male, age 80, both hemispheres
201.4
2451
Male, age 74, both hemispheres
178.5
2089
Male, age 76, left hemisphere
157.9
2369
Female, age 85, left hemisphere
141.0
Superior olive nTPM: 175.1
2364
Male, age 74, right hemisphere
224.9
1875
Female, age 85, both hemispheres
209.2
2020
Male, age 76, both hemispheres
151.8
2561
Female, age 91, both hemispheres
146.8
2329
Male, age 80, right hemisphere
143.0
Ventral periolivary nuclei nTPM: 177.3
2130
Female, age 85, both hemispheres
215.6
2165
Male, age 80, both hemispheres
184.4
2023
Male, age 76, both hemispheres
157.7
2794
Female, age 91, left hemisphere
151.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 216.6
2359
Male, age 61, both hemispheres
475.0
2840
Female, age 85, both hemispheres
202.0
2449
Male, age 74, both hemispheres
177.8
2161
Male, age 80, both hemispheres
156.0
1959
Male, age 76, both hemispheres
155.6
2456
Female, age 91, both hemispheres
133.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
104.2
Pig sample
Sample description
nTPM
Pons nTPM: 104.2
Samples: 4
Max nTPM: 126.4
Min nTPM: 84.8
Sample A
Female
98.9
Sample B
Female
84.8
Sample C
Male
106.5
Sample D
Male
126.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
