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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
86.8
nTPM
GTEx:
86.8
nTPM
FANTOM5:
165.8
Scaled Tags Per Million
Pig:
328.3
nTPM
Mouse:
269.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
86.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 86.8
Samples: 105
Max nTPM: 195.2
Min nTPM: 17.3
Std nTPM: 31.9
Median nTPM:
413_1
59 years, female
195.2
396_1
62 years, male
160.3
120_1
70 years, female
151.9
316_1
62 years, male
149.2
142_1
61 years, female
146.2
149_1
88 years, male
143.1
139_1
64 years, female
138.9
81_1
67 years, male
129.3
506_1
65 years, male
129.1
324_1
76 years, male
127.9
43_1
64 years, female
123.9
4_1
88 years, female
123.5
377_1
82 years, female
123.4
119_1
70 years, female
122.4
350_1
84 years, female
120.8
491_1
89 years, female
119.4
501_1
88 years, male
119.0
447_1
81 years, male
118.3
237_1
82 years, male
113.8
355_1
70 years, female
113.4
352_1
62 years, male
111.7
172_1
72 years, female
111.6
348_1
84 years, male
110.3
288_1
66 years, female
107.6
2_1
77 years, female
105.5
109_1
81 years, female
105.3
115_1
83 years, male
104.3
452_1
88 years, female
103.1
89_1
63 years, male
102.5
490_1
67 years, female
102.2
229_1
69 years, female
99.9
291_1
76 years, male
99.8
321_1
62 years, female
99.4
177_1
74 years, male
96.7
99_1
64 years, male
95.9
286_1
68 years, female
95.6
353_1
82 years, female
95.6
375_1
74 years, female
95.0
173_1
67 years, male
94.6
468_1
89 years, male
92.3
313_1
79 years, female
91.6
153_1
70 years, female
91.5
35_1
74 years, female
90.7
163_1
78 years, male
90.4
18_1
88 years, male
90.3
404_1
82 years, female
89.9
322_1
76 years, male
89.8
145_1
84 years, male
89.6
9_1
66 years, female
89.3
41_1
94 years, female
89.3
17_1
71 years, male
88.8
320_1
89 years, female
88.3
425_1
59 years, female
88.3
254_1
77 years, female
87.8
295_1
61 years, female
87.5
6_1
73 years, female
86.9
318_1
68 years, male
85.7
251_1
78 years, male
85.3
314_1
67 years, male
84.4
405_1
91 years, male
84.4
466_1
57 years, female
82.7
265_1
87 years, male
82.3
311_1
78 years, male
81.3
480_1
63 years, male
79.9
126_1
63 years, male
79.7
335_1
73 years, female
79.3
518_1
75 years, female
78.7
379_1
60 years, male
77.6
354_1
81 years, female
77.1
356_1
87 years, female
76.3
415_1
77 years, female
76.1
292_1
71 years, male
75.4
42_1
85 years, male
74.6
246_1
77 years, male
70.0
347_1
72 years, male
69.9
293_1
68 years, female
69.1
189_1
76 years, male
68.6
386_1
76 years, male
68.6
243_1
75 years, male
66.9
266_1
85 years, male
66.6
264_1
73 years, female
64.8
384_1
83 years, male
63.7
32_1
67 years, male
63.4
162_1
79 years, female
63.0
117_1
61 years, male
62.8
414_1
84 years, female
62.7
319_1
81 years, male
62.4
517_1
88 years, male
60.9
376_1
75 years, female
60.2
315_1
62 years, female
50.0
503_1
68 years, male
46.0
349_1
83 years, male
45.0
217_1
76 years, male
43.1
406_1
79 years, male
42.3
317_1
60 years, male
42.0
499_1
55 years, female
41.5
526_1
61 years, male
39.2
307_1
66 years, female
38.3
218_1
71 years, female
38.1
351_1
91 years, male
36.7
394_1
75 years, female
29.7
495_1
57 years, female
25.2
137_1
83 years, male
25.1
308_1
70 years, female
18.8
389_1
86 years, female
17.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.