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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
64.7
nTPM
HPA Brain:
186.1
nTPM
GTEx:
64.7
nTPM
FANTOM5:
415.7
Scaled Tags Per Million
Pig:
265.8
nTPM
Mouse:
78.2
nTPM
Allen mouse:
0.6
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
186.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 121.8
2586
Male, age 75, left hemisphere
161.7
2828
Female, age 72, unknown
152.6
1870
Female, age 42, unknown
141.5
2219
Male, age 76, both hemispheres
136.7
1827
Male, age 72, unknown
120.9
1833
Male, age 53, unknown
119.2
1830
Male, age 51, unknown
109.6
2411
Female, age 72, unknown
107.3
2666
Male, age 74, left hemisphere
88.2
2019
Male, age 18, unknown
80.2
Dorsal raphe nucleus nTPM: 161.9
2016
Female, age 72, unknown
204.1
2298
Female, age 72, unknown
159.7
2047
Male, age 72, unknown
154.3
1828
Male, age 53, unknown
150.2
2750
Male, age 76, both hemispheres
141.2
Inferior colliculus nTPM: 136.6
2097
Female, age 72, unknown
153.5
2849
Male, age 72, unknown
137.4
1848
Female, age 42, unknown
134.3
1890
Male, age 53, unknown
121.1
Median raphe nucleus nTPM: 145.5
2220
Male, age 76, midline
145.5
Periaquaductal grey, anterior nTPM: 160.9
1795
Male, age 51, unknown
170.5
2502
Female, age 75, unknown
159.5
1947
Male, age 18, unknown
152.6
Periaquaductal grey, dorsal nTPM: 162.8
1840
Male, age 53, unknown
196.4
2850
Male, age 76, both hemispheres
171.5
1831
Male, age 72, unknown
153.5
2464
Female, age 72, unknown
129.7
Periaquaductal grey, lateral nTPM: 186.1
2272
Male, age 74, both hemispheres
205.8
2140
Male, age 76, both hemispheres
190.0
2053
Male, age 18, unknown
162.6
Pretectal area nTPM: 144.2
2273
Male, age 74, both hemispheres
225.8
2224
Female, age 72, unknown
191.2
2825
Male, age 18, unknown
163.8
2316
Male, age 76, right hemisphere
155.0
2667
Female, age 75, unknown
149.7
2407
Male, age 75, both hemispheres
143.3
1944
Female, age 72, unknown
131.0
1816
Male, age 51, unknown
117.0
1815
Male, age 53, unknown
112.1
1817
Female, age 42, unknown
107.0
2007
Male, age 72, unknown
89.8
Red nucleus nTPM: 100.4
2227
Male, age 72, unknown
128.6
2769
Male, age 72, unknown
124.9
2503
Female, age 72, unknown
123.1
2725
Female, age 75, unknown
113.0
1954
Female, age 42, unknown
109.1
1904
Male, age 53, unknown
99.1
2584
Male, age 75, left hemisphere
96.0
1821
Female, age 72, unknown
89.6
2785
Male, age 18, unknown
88.8
1865
Male, age 51, unknown
81.3
2588
Male, age 74, left hemisphere
78.7
2823
Male, age 76, right hemisphere
72.9
Substantia nigra nTPM: 134.4
2699
Male, age 18, unknown
194.7
1916
Female, age 42, unknown
168.8
1851
Male, age 51, unknown
136.0
2241
Male, age 72, unknown
128.4
1941
Male, age 53, unknown
124.4
2583
Male, age 75, right hemisphere
123.5
2590
Female, age 75, unknown
123.1
2665
Male, age 74, both hemispheres
122.3
2409
Female, age 72, unknown
115.2
1889
Female, age 72, unknown
107.9
Superior colliculus nTPM: 131.6
2664
Male, age 75, both hemispheres
171.8
2261
Male, age 18, unknown
148.7
1839
Male, age 51, unknown
147.2
1796
Male, age 53, unknown
139.5
1995
Male, age 72, unknown
134.5
2587
Male, age 74, left hemisphere
129.8
1913
Female, age 42, unknown
128.0
2668
Female, age 75, unknown
114.7
2087
Female, age 72, unknown
104.8
1895
Male, age 76, right hemisphere
97.1
Ventral tegmental area nTPM: 145.1
1942
Male, age 51, unknown
181.0
2021
Male, age 53, unknown
172.0
1915
Female, age 42, unknown
159.3
2218
Male, age 76, both hemispheres
131.7
2223
Female, age 72, unknown
124.3
2410
Female, age 72, unknown
102.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
64.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 64.7
Samples: 139
Max nTPM: 154.4
Min nTPM: 19.3
Std nTPM: 22.0
Median nTPM: 64.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
154.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
121.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
113.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
110.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
110.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
107.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
107.7
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
106.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
104.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
100.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
94.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
93.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
93.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
92.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
91.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
91.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
87.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
87.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
86.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
86.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
86.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
86.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
85.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
84.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
84.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
84.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
83.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
82.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
81.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
80.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
79.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
78.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
78.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
77.6
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
76.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
76.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
76.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
76.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
76.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
76.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
76.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
74.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
74.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
73.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
73.9
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
73.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
72.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
72.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
72.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
71.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
71.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
70.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
69.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
69.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
69.2
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
69.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
68.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
68.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
68.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
68.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
67.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
67.4
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
67.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
67.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
66.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
66.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
66.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
65.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
65.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
64.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
63.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
63.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
63.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
62.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
62.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
62.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
62.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
61.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
59.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
58.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
58.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
57.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
56.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
56.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
56.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
55.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
54.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
54.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
54.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
52.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
52.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
51.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
50.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
49.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
49.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
49.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
49.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
48.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
48.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
48.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
48.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
48.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
48.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
47.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
47.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
47.3
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
47.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
47.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
46.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
46.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
46.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
45.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
44.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
44.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
44.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
43.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
43.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
43.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
43.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
42.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
42.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
41.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
39.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
39.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
39.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
37.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
37.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
37.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
36.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
36.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
36.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
36.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
36.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
35.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
34.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
24.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
23.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
22.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
19.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
78.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 78.2
Samples: 4
Max nTPM: 81.7
Min nTPM: 75.3
Sample A
Male
77.5
Sample B
Male
78.3
Sample C
Female
81.7
Sample D
Female
75.3
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.