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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
69.3
nTPM
HPA Brain:
136.5
nTPM
GTEx:
69.3
nTPM
FANTOM5:
508.1
Scaled Tags Per Million
Pig:
173.2
nTPM
Mouse:
114.2
nTPM
Allen mouse:
2.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
136.5
Sample id
Sample description
nTPM
Amygdala nTPM: 136.5
1987
Female, age 91, left hemisphere
176.9
2514
Male, age 75, right hemisphere
171.9
2695
Female, age 67, right hemisphere
120.2
2517
Female, age 94, left hemisphere
119.3
2814
Male, age 76, right hemisphere
94.2
Basal amygdala nTPM: 109.7
2609
Male, age 75, right hemisphere
152.9
1955
Male, age 76, both hemispheres
118.0
2110
Male, age 80, left hemisphere
106.4
2243
Female, age 91, right hemisphere
103.2
2685
Female, age 94, left hemisphere
97.8
2827
Female, age 67, right hemisphere
80.0
Central amygdala nTPM: 113.6
2515
Male, age 75, right hemisphere
136.1
2239
Male, age 80, left hemisphere
114.1
2701
Female, age 91, right hemisphere
113.0
2826
Female, age 94, left hemisphere
103.3
1905
Male, age 76, both hemispheres
101.2
Corticomedial amygdala nTPM: 122.8
2428
Male, age 75, right hemisphere
149.1
2242
Female, age 91, right hemisphere
144.7
2829
Male, age 80, left hemisphere
122.5
2535
Female, age 67, right hemisphere
122.4
2429
Female, age 94, left hemisphere
110.0
2240
Male, age 76, both hemispheres
88.4
Lateral amygdala nTPM: 108.7
2256
Male, age 80, left hemisphere
142.1
2516
Male, age 75, right hemisphere
118.6
2255
Female, age 91, right hemisphere
116.8
1883
Male, age 76, both hemispheres
108.4
2534
Female, age 94, left hemisphere
107.5
2830
Female, age 67, right hemisphere
58.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
69.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 69.3
Samples: 152
Max nTPM: 147.0
Min nTPM: 22.7
Std nTPM: 19.3
Median nTPM: 67.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
147.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
128.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
128.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
120.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
117.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
108.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
103.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
100.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
99.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
98.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
94.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
93.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
93.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
92.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
92.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
91.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
89.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
89.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
89.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
89.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
88.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
87.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
87.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
86.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
86.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
86.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
86.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
84.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
84.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
83.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
83.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
82.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
82.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
82.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
82.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
81.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
80.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
80.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
80.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
79.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
79.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
79.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
79.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
79.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
78.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
77.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
77.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
77.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
76.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
76.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
74.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
74.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
74.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
74.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
73.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
73.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
73.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
72.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
72.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
72.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
72.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
71.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
71.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
71.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
71.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
70.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
70.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
70.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
69.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
69.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
68.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
68.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
67.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
67.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
67.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
67.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
67.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
67.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
66.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
66.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
66.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
66.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
66.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
66.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
66.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
65.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
65.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
64.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
64.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
64.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
62.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
62.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
61.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
61.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
61.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
60.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
60.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
60.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
60.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
60.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
60.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
59.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
59.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
59.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
59.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
58.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
58.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
58.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
58.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
58.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
58.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
57.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
57.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
57.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
57.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
56.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
56.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
56.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
55.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
55.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
55.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
54.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
54.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
54.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
54.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
53.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
52.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
51.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
51.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
50.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
50.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
50.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
50.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
49.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
49.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
48.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
47.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
47.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
47.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
47.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
45.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
45.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
42.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
40.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
38.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
36.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
36.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
35.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
34.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
33.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
31.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
22.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
114.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 114.2
Samples: 4
Max nTPM: 120.0
Min nTPM: 104.8
Sample A
Male
119.2
Sample B
Male
112.9
Sample C
Female
104.8
Sample D
Female
120.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.