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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CYFIP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
70.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
51.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
48.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
42.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
41.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
41.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
40.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
40.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
39.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
37.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
37.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
33.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
33.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
32.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
32.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
30.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
30.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
29.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
28.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
28.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
27.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
27.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
26.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
26.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
26.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
26.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
25.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
25.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
24.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
24.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
23.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
23.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
23.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
23.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
23.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
22.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
22.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
22.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
22.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
21.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
21.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
21.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
20.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
20.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
20.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
19.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
19.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
18.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
18.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
18.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
18.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
17.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
16.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
16.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
16.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
15.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
15.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
13.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
5.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CYFIP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
90.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
76.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
75.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
74.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
73.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
71.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
69.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
68.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
67.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
66.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
66.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
66.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
66.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
64.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
64.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
64.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
64.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
64.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
64.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
63.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
63.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
62.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
61.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
60.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
59.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
59.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
59.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
59.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
59.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
59.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
59.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
59.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
58.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
58.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
58.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
58.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
58.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
58.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
57.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
57.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
57.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
57.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
57.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
56.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
56.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
56.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
56.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
56.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
56.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
56.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
55.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
55.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
55.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
55.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
55.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
55.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
55.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
55.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
55.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
55.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
55.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
55.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
55.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
55.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
54.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
54.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
54.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
54.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
54.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
54.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
54.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
54.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
54.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
54.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
54.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
54.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
54.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
54.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
53.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
53.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
53.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
53.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
53.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
53.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
53.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
53.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
53.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
53.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
53.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
52.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
52.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
52.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
52.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
52.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
52.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
52.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
52.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
52.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
52.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
51.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
51.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
51.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
51.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
51.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
51.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
51.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
51.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
51.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
51.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
51.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
51.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
51.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
51.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
50.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
50.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
50.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
50.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
50.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
50.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
50.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
50.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
50.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
50.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
50.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
50.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
50.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
50.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
49.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
49.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
49.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
49.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
49.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
49.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
49.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
49.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
49.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
49.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
49.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
49.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
49.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
49.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
49.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
49.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
49.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
49.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
49.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
49.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
49.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
49.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
49.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
49.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
49.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
49.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
48.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
48.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
48.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
48.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
48.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
48.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
48.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
48.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
48.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
48.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
48.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
48.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
47.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
47.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
47.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
47.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
47.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
47.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
47.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
47.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
47.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
47.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
47.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
46.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
46.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
46.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
46.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
46.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
46.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
46.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
46.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
46.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
46.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
46.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
46.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
46.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
46.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
46.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
46.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
45.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
45.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
45.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
45.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
45.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
45.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
45.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
45.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
45.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
45.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
45.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
45.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
45.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
45.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
45.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
44.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
44.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
44.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
44.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
44.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
44.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
44.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
44.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
44.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
44.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
44.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
44.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
44.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
44.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
44.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
44.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
44.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
44.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
44.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
44.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
44.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
44.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
43.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
43.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
43.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
43.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
43.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
43.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
43.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
43.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
43.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
43.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
43.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
43.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
43.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
43.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
43.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
43.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
42.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
42.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
42.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
42.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
42.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
42.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
42.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
42.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
42.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
42.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
42.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
42.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
42.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
42.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
42.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
42.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
41.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
41.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
41.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
41.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
41.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
41.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
41.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
41.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
41.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
41.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
41.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
41.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
41.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
41.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
40.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
40.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
40.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
40.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
40.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
40.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
40.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
40.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
40.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
39.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
39.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
39.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
39.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
39.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
39.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
39.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
39.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
39.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
39.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
39.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
39.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
39.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
39.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
39.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
39.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
38.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
38.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
38.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
38.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
38.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
38.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
38.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
38.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
38.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
38.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
38.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
37.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
37.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
37.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
37.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
37.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
37.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
37.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
37.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
37.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
37.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
37.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
37.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
37.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
37.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
36.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
36.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
36.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
36.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
36.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
36.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
36.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
36.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
36.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
36.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
36.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
36.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
36.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
36.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
36.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
36.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
35.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
35.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
35.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
35.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
35.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
35.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
35.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
35.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
35.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
35.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
35.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
35.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
34.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
34.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
34.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
34.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
34.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
34.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
34.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
34.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
34.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
34.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
34.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
34.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
34.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
34.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
33.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
33.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
33.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
33.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
33.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
33.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
33.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
33.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
32.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
32.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
32.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
32.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
32.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
32.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
32.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
32.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
32.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
32.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
31.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
31.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
31.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
31.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
31.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
31.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
31.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
31.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
30.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
30.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
30.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
30.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
30.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
30.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
30.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
30.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
30.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
30.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
30.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
29.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
29.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
29.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
29.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
29.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
29.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
29.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
28.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
28.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
28.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
28.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
28.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
28.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
28.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
27.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
27.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
27.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
27.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
27.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
27.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
27.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
27.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
27.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
26.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
26.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
26.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
26.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
26.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
26.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
26.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
26.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
25.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
25.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
25.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
25.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
25.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
25.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
25.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
25.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
24.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
24.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
24.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
24.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
24.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
23.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
23.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
23.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
23.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
23.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
22.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
22.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
22.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
22.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
22.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
21.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
21.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
21.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
21.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
21.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
21.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
20.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
20.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
19.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
19.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
18.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
18.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
16.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
16.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
15.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
14.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
13.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
8.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CYFIP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
70.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
70.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
64.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
58.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
58.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
58.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
58.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
57.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
57.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
56.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
56.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
56.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
55.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
54.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
53.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
53.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
52.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
52.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
52.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
52.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
52.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
51.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
51.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
51.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
51.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
51.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
50.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
50.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
50.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
49.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
49.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
49.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
48.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
47.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
47.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
47.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
46.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
46.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
45.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
45.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
45.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
45.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
44.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
44.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
43.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
43.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
43.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
43.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
43.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
43.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
42.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
42.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
42.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
42.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
41.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
41.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
41.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
41.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
40.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
39.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
39.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
39.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
39.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
39.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
39.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
39.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
38.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
38.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
38.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
38.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
38.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
38.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
37.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
36.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
36.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
35.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
35.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
34.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
34.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
33.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
33.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
33.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
32.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
30.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
29.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
29.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
28.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
28.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
27.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
25.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
24.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
23.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
20.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
19.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
15.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CYFIP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
92.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
84.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
82.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
81.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
79.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
77.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
75.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
72.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
70.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
69.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
69.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
69.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
69.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
68.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
68.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
68.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
68.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
67.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
66.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
64.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
64.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
64.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
64.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
63.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
63.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
63.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
63.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
62.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
62.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
61.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
61.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
60.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
60.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
60.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
59.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
59.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
59.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
59.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
59.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
59.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
58.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
58.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
58.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
57.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
57.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
57.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
57.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
57.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
56.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
56.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
56.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
55.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
55.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
55.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
54.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
54.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
53.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
53.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
53.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
53.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
53.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
53.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
52.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
51.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
51.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
51.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
51.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
51.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
49.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
49.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
49.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
49.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
48.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
48.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
48.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
47.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
47.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
47.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
47.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
47.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
47.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
47.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
47.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
47.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
46.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
46.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
46.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
46.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
46.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
45.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
45.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
45.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
44.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
44.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
44.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
44.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
44.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
44.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
44.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
43.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
43.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
43.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
43.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
42.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
42.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
42.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
42.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
42.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
42.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
41.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
41.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
41.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
41.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
41.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
41.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
41.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
41.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
41.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
41.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
41.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
41.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
40.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
40.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
40.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
40.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
40.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
40.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
40.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
39.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
39.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
39.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
39.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
39.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
39.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
38.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
38.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
38.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
38.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
38.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
38.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
38.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
38.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
38.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
38.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
37.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
37.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
37.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
37.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
37.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
36.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
36.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
36.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
36.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
36.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
36.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
36.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
36.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
36.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
35.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
35.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
35.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
35.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
35.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
35.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
34.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
34.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
34.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
34.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
34.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
34.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
33.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
33.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
33.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
33.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
33.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
32.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
32.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
32.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
32.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
32.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
31.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
31.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
31.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
31.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
30.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
30.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
30.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
30.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
30.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
29.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
29.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
29.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
29.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
28.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
28.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
28.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
28.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
28.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
28.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
28.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
28.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
27.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
27.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
27.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
26.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
26.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
26.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
25.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
25.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
25.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
25.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
24.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
24.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
24.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
24.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
23.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
22.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
22.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
22.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
22.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
21.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
21.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
19.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
19.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
18.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
18.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
18.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
18.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
18.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
18.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
17.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
17.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
17.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
16.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
16.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
15.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
15.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
15.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
14.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
14.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
14.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
14.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
13.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
12.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
7.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.7
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.8
CPT0001340003
Tumor
0.6
CPT0002270011
Tumor
0.5
CPT0078510003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0001180009
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0012370003
Tumor
0.5
CPT0088760003
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0025350003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0084560003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0025230003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0009060003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0084590001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0018250001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0015730003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0078840001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0079000001
Normal
-0.3
CPT0012900004
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0078660003
Tumor
-0.4
CPT0079180003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
