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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SRGAP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
25.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
19.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
10.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
9.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
9.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
8.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
7.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
6.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
6.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
6.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
6.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
5.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
5.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
4.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
4.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
3.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
3.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
3.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
3.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
3.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
2.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
2.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
2.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
2.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
2.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SRGAP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
52.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
34.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
32.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
32.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
30.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
30.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
29.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
29.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
28.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
28.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
28.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
27.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
27.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
26.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
26.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
26.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
26.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
26.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
25.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
25.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
25.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
25.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
25.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
25.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
24.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
24.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
24.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
24.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
24.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
24.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
24.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
24.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
24.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
24.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
23.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
23.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
23.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
23.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
23.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
22.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
22.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
22.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
22.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
22.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
22.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
22.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
22.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
22.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
22.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
22.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
22.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
22.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
21.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
21.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
21.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
21.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
21.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
21.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
21.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
21.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
21.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
21.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
21.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
21.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
20.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
20.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
20.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
20.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
20.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
20.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
20.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
20.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
19.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
19.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
19.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
19.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
19.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
19.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
19.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
19.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
19.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
19.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
19.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
18.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
18.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
18.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
18.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
18.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
18.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
18.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
18.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
18.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
18.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
18.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
17.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
17.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
17.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
17.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
17.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
17.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
17.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
17.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
17.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
17.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
17.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
17.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
17.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
16.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
16.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
16.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
16.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
16.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
16.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
16.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
16.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
16.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
16.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
16.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
16.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
16.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
16.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
16.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
16.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
16.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
16.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
16.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
16.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
16.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
16.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
16.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
15.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
15.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
15.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
15.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
15.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
15.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
15.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
15.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
15.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
14.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
14.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
14.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
14.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
14.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
14.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
14.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
14.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
13.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
13.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
13.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
13.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
13.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
13.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
13.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
13.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
13.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
13.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
12.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
12.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
12.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
12.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
12.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
12.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
12.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
11.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
11.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
11.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
11.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
11.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
11.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
11.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
11.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
10.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
10.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
10.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
10.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
10.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
10.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
10.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
9.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
9.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
9.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
9.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
9.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
9.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
9.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
9.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
9.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
9.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
9.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
9.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
8.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
8.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
8.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
7.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
7.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
7.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
7.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
7.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
7.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
7.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
7.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
6.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
6.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
6.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
6.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
6.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
6.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
6.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
5.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
5.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
5.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
4.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
4.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
3.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
3.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SRGAP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
39.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
34.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
34.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
33.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
33.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
32.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
31.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
29.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
28.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
28.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
27.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
26.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
26.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
26.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
24.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
24.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
24.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
24.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
23.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
23.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
23.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
23.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
23.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
22.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
22.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
22.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
22.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
22.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
22.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
22.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
21.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
21.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
21.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
21.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
20.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
20.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
20.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
19.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
19.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
19.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
18.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
17.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
17.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
17.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
16.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
16.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
16.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
16.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
16.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
16.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
15.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
15.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
15.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
14.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
14.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
13.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
10.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
9.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
8.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
8.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
7.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
5.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
5.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
4.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SRGAP2 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
39.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
38.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
32.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
30.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
28.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
25.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
24.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
23.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
23.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
23.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
22.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
22.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
21.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
21.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
20.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
20.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
20.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
20.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
19.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
19.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
18.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
18.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
18.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
18.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
18.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
17.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
17.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
16.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
16.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
16.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
15.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
15.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
15.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
14.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
14.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
14.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
14.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
13.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
13.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
13.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
13.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
13.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
13.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
12.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
12.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
12.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
12.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
12.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
12.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
12.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
12.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
12.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
12.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
11.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
11.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
11.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
11.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
11.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
11.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
11.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
11.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
10.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
10.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
10.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
10.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
10.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
9.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
9.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
9.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
9.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
9.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
9.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
9.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
9.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
9.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
9.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
9.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
8.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
8.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
8.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
8.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
8.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
8.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
8.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
8.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
8.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
8.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
8.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
8.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
8.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
8.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
8.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
8.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
7.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
7.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
7.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
7.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
7.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
7.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
7.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
7.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
7.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
7.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
7.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
7.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
6.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
6.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
6.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
6.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
6.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
6.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
6.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
6.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
6.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
6.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
6.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
6.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
5.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
5.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
5.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
5.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
5.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
5.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
5.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
5.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
5.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
5.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
5.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
5.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
5.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
4.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
4.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
4.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
4.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
4.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
4.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
4.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
4.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
4.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
4.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
4.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
4.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
4.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
3.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
3.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
3.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
3.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
3.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
3.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
3.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
3.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
3.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
3.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
3.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
2.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
2.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
2.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
2.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
2.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
2.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
2.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
2.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
1.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
1.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
0.9
CPT0001180009
Tumor
0.7
CPT0017410003
Tumor
0.7
CPT0001340003
Tumor
0.7
CPT0006440003
Tumor
0.6
CPT0025880003
Tumor
0.6
CPT0076330003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0000780007
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0069000003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0088550004
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0088900003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0066470004
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0088760003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0006530001
Normal
0.3
CPT0002350011
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0066480003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0089460004
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0065450001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0088570001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0086370003
Normal
0.0
CPT0066430001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0078670001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0065430003
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0014450004
Tumor
-0.2
CPT0012920003
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0015730003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0007470001
Normal
-0.3
CPT0007320003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0024670003
Tumor
-0.4
CPT0078800003
Tumor
-0.7
CPT0088970003
Tumor
-0.7
CPT0078660003
Tumor
-0.8
CPT0079180003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
