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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TXNIP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
230.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
1880.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
608.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
487.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
464.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
463.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
455.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
417.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
376.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
363.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
353.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
296.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
271.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
266.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
257.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
252.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
248.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
243.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
236.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
233.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
232.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
232.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
230.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
225.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
214.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
214.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
212.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
208.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
207.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
205.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
202.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
200.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
190.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
189.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
189.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
180.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
173.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
172.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
171.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
167.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
164.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
156.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
138.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
136.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
135.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
133.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
132.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
131.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
131.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
126.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
116.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
108.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
106.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
102.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
87.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
86.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
77.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
76.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
65.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
63.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
62.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
58.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
55.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
43.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TXNIP is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
443.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
2128.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
1413.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
1318.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
1317.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
1190.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
1169.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
1169.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
1163.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
1137.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
1135.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
1122.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
1060.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
1036.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
1025.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
1005.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
1005.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
998.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
996.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
991.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
986.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
976.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
950.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
947.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
931.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
930.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
901.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
891.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
871.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
862.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
861.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
850.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
849.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
840.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
820.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
818.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
817.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
806.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
801.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
800.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
793.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
791.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
777.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
775.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
774.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
772.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
770.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
761.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
751.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
749.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
749.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
742.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
740.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
737.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
736.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
731.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
728.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
726.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
725.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
715.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
708.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
700.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
697.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
695.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
692.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
690.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
689.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
688.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
687.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
686.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
684.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
683.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
679.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
678.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
672.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
670.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
670.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
670.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
663.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
662.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
661.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
659.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
658.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
654.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
644.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
637.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
637.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
636.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
634.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
634.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
632.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
631.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
631.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
629.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
628.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
625.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
622.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
622.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
619.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
619.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
618.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
617.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
613.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
612.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
610.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
609.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
608.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
608.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
606.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
602.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
599.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
598.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
598.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
598.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
594.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
593.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
593.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
592.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
589.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
589.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
589.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
585.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
579.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
579.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
578.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
577.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
576.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
575.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
574.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
574.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
573.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
573.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
570.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
566.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
564.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
564.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
564.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
562.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
560.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
559.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
558.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
557.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
555.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
552.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
551.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
548.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
543.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
543.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
542.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
541.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
535.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
535.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
534.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
534.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
532.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
530.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
529.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
526.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
526.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
525.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
524.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
524.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
522.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
521.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
520.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
518.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
517.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
517.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
516.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
515.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
514.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
513.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
511.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
507.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
507.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
504.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
504.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
504.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
503.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
502.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
501.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
501.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
499.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
497.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
497.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
496.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
495.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
492.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
488.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
488.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
487.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
485.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
484.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
483.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
479.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
479.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
479.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
476.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
475.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
475.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
474.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
473.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
471.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
469.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
468.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
466.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
464.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
463.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
463.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
462.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
462.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
458.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
458.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
458.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
458.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
457.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
456.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
453.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
453.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
450.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
447.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
447.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
445.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
445.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
444.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
444.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
444.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
443.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
442.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
437.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
436.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
434.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
434.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
433.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
431.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
430.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
426.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
424.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
422.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
422.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
422.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
421.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
421.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
420.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
420.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
419.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
418.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
418.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
417.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
416.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
413.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
411.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
410.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
410.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
409.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
408.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
408.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
408.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
404.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
403.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
403.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
402.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
401.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
400.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
400.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
398.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
398.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
397.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
397.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
397.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
395.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
393.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
390.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
390.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
389.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
389.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
384.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
384.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
384.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
382.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
382.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
381.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
381.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
380.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
379.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
379.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
379.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
378.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
376.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
375.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
374.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
373.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
370.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
369.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
368.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
367.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
365.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
365.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
363.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
363.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
363.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
363.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
363.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
362.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
362.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
361.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
361.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
361.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
359.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
359.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
358.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
357.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
356.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
355.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
354.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
354.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
353.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
353.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
353.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
353.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
353.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
352.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
351.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
351.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
349.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
348.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
348.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
346.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
345.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
345.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
341.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
341.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
340.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
339.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
336.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
335.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
330.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
329.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
328.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
328.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
327.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
327.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
326.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
324.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
324.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
324.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
323.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
323.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
323.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
321.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
321.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
320.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
320.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
320.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
320.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
319.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
315.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
315.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
312.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
312.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
312.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
312.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
311.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
311.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
311.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
310.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
309.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
308.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
307.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
303.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
302.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
301.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
300.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
300.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
298.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
296.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
295.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
292.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
291.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
290.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
290.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
288.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
287.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
286.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
286.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
284.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
284.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
280.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
278.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
277.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
276.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
274.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
273.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
270.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
270.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
268.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
268.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
267.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
266.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
265.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
263.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
260.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
259.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
258.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
257.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
256.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
255.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
252.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
252.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
252.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
251.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
251.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
250.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
249.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
247.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
247.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
246.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
245.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
243.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
243.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
243.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
242.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
242.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
242.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
240.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
239.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
239.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
239.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
237.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
236.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
236.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
234.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
232.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
229.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
229.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
228.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
228.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
224.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
224.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
223.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
222.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
222.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
218.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
214.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
213.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
211.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
211.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
208.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
208.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
202.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
201.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
199.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
197.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
194.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
194.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
191.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
190.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
188.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
187.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
187.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
186.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
182.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
181.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
180.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
180.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
179.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
177.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
175.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
173.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
172.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
171.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
166.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
166.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
166.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
163.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
163.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
162.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
155.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
154.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
152.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
152.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
151.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
151.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
147.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
146.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
144.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
142.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
141.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
141.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
140.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
138.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
136.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
136.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
132.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
131.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
131.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
125.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
124.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
121.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
121.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
119.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
116.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
115.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
113.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
113.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
111.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
106.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
100.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
95.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
95.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
94.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
86.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
79.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
68.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
68.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
66.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
66.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
47.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
46.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
45.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
29.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TXNIP is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
562.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
1877.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
1315.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
1183.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
1150.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
1122.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
1090.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
1065.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
1004.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
949.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
932.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
898.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
898.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
890.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
870.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
845.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
838.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
818.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
790.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
790.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
786.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
771.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
762.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
757.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
749.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
717.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
694.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
690.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
671.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
671.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
644.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
636.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
633.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
622.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
599.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
590.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
588.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
573.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
571.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
569.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
569.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
563.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
553.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
548.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
544.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
541.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
537.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
518.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
513.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
506.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
505.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
502.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
498.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
496.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
493.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
490.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
490.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
485.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
471.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
467.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
449.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
446.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
443.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
427.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
422.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
419.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
417.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
416.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
399.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
389.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
387.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
373.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
372.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
365.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
356.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
352.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
350.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
349.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
345.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
343.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
342.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
340.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
329.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
325.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
312.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
310.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
303.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
296.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
292.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
286.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
277.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
268.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
259.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
244.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
240.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
235.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
205.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
197.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
184.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
166.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TXNIP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
376.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
2146.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
1467.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
1403.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
1199.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
1176.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
1116.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
1106.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
1059.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
1025.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
1009.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
1004.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
987.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
965.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
965.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
947.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
942.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
940.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
939.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
898.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
896.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
873.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
844.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
799.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
786.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
773.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
755.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
715.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
711.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
698.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
687.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
678.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
670.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
666.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
652.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
644.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
643.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
626.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
625.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
606.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
598.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
592.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
591.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
590.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
583.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
578.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
565.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
556.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
554.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
543.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
543.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
540.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
532.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
529.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
520.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
518.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
518.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
517.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
515.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
513.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
504.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
501.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
497.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
493.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
493.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
490.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
487.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
487.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
485.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
484.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
481.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
477.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
475.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
472.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
469.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
469.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
468.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
466.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
465.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
464.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
463.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
455.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
453.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
443.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
441.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
439.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
438.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
433.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
433.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
431.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
431.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
428.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
427.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
423.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
423.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
420.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
419.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
418.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
418.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
416.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
416.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
412.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
411.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
411.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
409.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
406.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
406.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
405.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
405.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
404.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
401.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
387.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
384.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
378.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
377.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
376.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
370.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
359.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
355.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
353.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
346.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
346.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
341.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
341.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
341.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
339.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
335.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
334.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
333.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
332.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
331.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
328.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
327.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
326.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
324.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
324.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
322.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
315.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
313.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
312.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
310.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
309.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
309.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
306.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
306.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
305.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
303.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
302.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
301.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
300.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
295.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
294.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
290.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
284.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
278.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
272.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
270.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
269.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
269.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
268.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
266.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
265.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
265.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
265.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
263.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
262.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
262.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
261.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
261.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
260.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
260.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
257.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
256.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
256.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
253.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
253.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
252.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
252.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
248.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
248.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
247.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
246.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
244.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
243.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
243.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
241.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
238.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
236.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
234.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
233.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
232.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
227.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
225.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
225.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
224.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
223.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
223.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
222.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
221.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
220.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
220.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
219.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
214.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
212.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
211.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
206.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
203.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
196.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
196.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
196.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
195.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
194.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
191.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
191.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
186.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
185.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
182.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
182.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
181.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
181.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
176.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
171.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
171.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
170.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
170.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
169.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
168.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
166.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
166.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
163.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
163.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
158.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
156.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
154.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
152.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
151.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
148.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
146.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
145.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
144.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
140.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
136.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
131.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
131.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
128.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
126.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
121.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
119.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
117.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
115.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
114.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
113.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
106.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
103.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
99.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
98.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
96.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
93.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
93.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
91.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
90.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
87.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
86.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
85.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
85.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
83.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
83.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
83.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
82.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
82.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
79.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
77.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
77.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
75.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
64.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
60.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
60.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
51.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
48.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
47.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
41.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
38.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
31.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.0
CPT0025290003
Tumor
1.0
CPT0063630003
Tumor
1.0
CPT0065870003
Tumor
1.0
CPT0063320003
Tumor
0.9
CPT0078990003
Tumor
0.9
CPT0006440003
Tumor
0.9
CPT0088970003
Tumor
0.9
CPT0065690003
Tumor
0.8
CPT0000640003
Tumor
0.8
CPT0088760003
Tumor
0.8
CPT0088630003
Tumor
0.7
CPT0009000003
Tumor
0.7
CPT0077110003
Tumor
0.7
CPT0078510003
Tumor
0.7
CPT0086030003
Tumor
0.6
CPT0085670003
Tumor
0.6
CPT0076330003
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0009060003
Tumor
0.5
CPT0065810003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0078800003
Tumor
0.5
CPT0084560003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0065930003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0088570001
Normal
0.5
CPT0012370003
Tumor
0.5
CPT0077310003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0065820001
Normal
0.4
CPT0075720003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0089020003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0012080003
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0015810003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0025580004
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0010110003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0015730003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0001190001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0000660001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0064370003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0077500001
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0092790003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0017850003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0087040003
Tumor
-0.2
CPT0088710001
Normal
-0.2
CPT0001180009
Tumor
-0.3
CPT0014350001
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0023350003
Tumor
-0.3
CPT0079430001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0078940001
Normal
-0.4
CPT0088640003
Normal
-0.4
CPT0006950001
Normal
-0.4
CPT0092160003
Tumor
-0.4
CPT0078660003
Tumor
-0.4
CPT0082010001
Normal
-0.4
CPT0007320003
Tumor
-0.4
CPT0014470001
Normal
-0.4
CPT0010120001
Normal
-0.5
CPT0025060001
Normal
-0.5
CPT0002270011
Tumor
-0.5
CPT0066520001
Normal
-0.5
CPT0020020001
Normal
-0.5
CPT0025920001
Normal
-0.5
CPT0089480003
Normal
-0.5
CPT0025880003
Tumor
-0.5
CPT0023710001
Normal
-0.5
CPT0092800003
Normal
-0.6
CPT0092740003
Normal
-0.6
CPT0065450001
Normal
-0.6
CPT0075170001
Normal
-0.6
CPT0086830003
Normal
-0.6
CPT0023360001
Normal
-0.6
CPT0092310003
Normal
-0.6
CPT0001550001
Normal
-0.6
CPT0086870003
Tumor
-0.6
CPT0001230001
Normal
-0.6
CPT0079180003
Tumor
-0.6
CPT0000790001
Normal
-0.7
CPT0081880003
Tumor
-0.7
CPT0001350001
Normal
-0.7
CPT0024680001
Normal
-0.8
CPT0014450004
Tumor
-0.8
CPT0006730001
Normal
-0.8
CPT0007470001
Normal
-0.8
CPT0087050003
Normal
-0.8
CPT0086970003
Normal
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.