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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL17 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1676.3
Number of samples
349
Samples
Sample
Description
TPM
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
5566.0
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
5259.1
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
5169.8
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
5079.1
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
5050.6
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
4698.1
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
4517.6
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
4320.4
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
4290.6
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
4278.0
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
4063.1
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
4062.2
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
3638.7
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
3557.0
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
3519.2
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
3497.8
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
3464.3
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
3428.8
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
3363.4
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
3361.3
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
3359.8
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
3352.4
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
3216.2
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
3197.6
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
3161.6
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
3151.0
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
3103.6
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
3101.9
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
3101.3
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
3098.9
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
3034.9
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
3022.1
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
3019.2
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
3014.3
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
2990.9
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
2971.8
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
2947.4
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
2915.4
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
2877.6
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
2854.9
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
2821.7
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
2805.2
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
2792.4
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
2783.4
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
2756.9
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
2755.5
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
2742.8
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
2714.6
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
2701.9
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
2697.8
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
2686.3
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
2664.8
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
2639.6
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
2637.8
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
2614.0
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
2557.3
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
2550.9
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
2545.7
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
2533.3
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
2517.0
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
2449.9
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
2437.9
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
2412.7
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
2370.9
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
2368.6
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
2360.8
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
2343.9
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
2341.2
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
2330.8
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
2312.2
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
2265.9
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
2232.0
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
2226.7
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
2221.3
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
2208.2
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
2167.2
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
2133.4
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
2127.7
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
2121.8
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
2092.4
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
2073.6
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
2066.6
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
2054.1
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
2052.2
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2019.5
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1998.4
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
1986.4
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
1962.2
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
1956.8
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1948.3
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
1934.6
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
1918.0
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
1910.8
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1898.1
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1895.7
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
1889.5
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
1881.8
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
1870.9
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1854.0
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
1850.6
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
1843.3
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
1842.4
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1841.5
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
1830.9
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
1830.3
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
1826.9
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
1824.4
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1822.1
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
1819.7
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
1816.3
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
1784.5
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1783.1
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
1779.7
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1778.1
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
1776.2
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
1772.0
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1764.4
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
1761.9
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1757.0
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
1756.5
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
1749.6
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
1745.4
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
1741.4
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
1732.7
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1718.1
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1714.1
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
1708.1
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
1704.1
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
1702.8
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1702.2
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1697.1
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
1696.0
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
1671.8
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
1667.6
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1632.2
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
1631.0
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
1626.3
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
1623.1
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
1621.5
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
1616.6
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
1616.4
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
1613.1
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
1596.6
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
1592.5
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1589.6
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
1586.5
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1575.4
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
1572.6
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
1566.8
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1559.6
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
1556.6
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
1550.9
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
1550.8
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
1550.5
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1549.0
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
1532.0
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
1531.5
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1524.8
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1514.7
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
1513.6
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1508.6
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
1508.1
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
1507.1
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
1505.3
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
1500.0
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
1483.6
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1481.0
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
1474.8
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
1474.7
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
1472.7
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1453.9
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
1442.4
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1441.4
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
1432.6
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
1431.1
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
1424.4
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
1409.3
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
1399.4
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
1396.0
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
1392.3
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
1392.1
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
1384.2
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
1376.3
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1374.7
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
1369.8
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
1349.2
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
1348.2
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
1346.9
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1335.9
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1322.4
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
1312.2
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1309.1
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
1308.3
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
1303.8
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1299.4
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1297.8
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1290.5
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
1289.3
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
1287.3
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
1285.1
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
1284.7
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
1282.8
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
1277.9
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1277.4
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
1266.9
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
1262.9
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1262.3
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1257.8
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
1245.5
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
1243.4
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
1236.9
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
1229.3
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
1227.1
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
1226.3
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
1220.8
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
1215.2
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1215.1
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
1212.9
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1210.8
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1206.9
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
1201.4
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
1195.8
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
1194.9
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1193.3
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1191.8
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1187.8
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1180.0
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
1177.0
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
1173.1
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
1171.4
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1165.9
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1164.3
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
1159.3
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
1158.3
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
1155.3
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1153.3
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1152.7
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1150.3
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
1145.4
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
1145.3
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1145.0
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
1141.0
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
1140.7
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
1133.9
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
1131.9
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
1130.0
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
1122.0
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
1119.5
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
1116.0
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
1115.5
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
1110.3
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
1109.8
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
1108.5
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
1105.1
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1096.7
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
1075.1
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
1072.6
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
1071.9
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1065.5
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1064.6
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
1061.4
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
1058.5
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1053.6
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1052.8
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1039.2
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
1027.6
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
1014.4
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1014.0
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
992.7
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
991.5
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
988.6
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
986.6
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
982.6
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
978.0
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
975.9
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
974.2
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
968.4
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
965.3
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
960.6
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
958.6
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
954.1
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
953.4
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
942.4
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
939.3
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
931.6
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
931.6
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
920.0
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
919.5
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
917.5
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
917.1
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
913.6
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
913.4
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
909.5
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
909.1
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
908.0
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
905.5
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
899.6
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
890.7
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
889.0
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
888.5
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
884.7
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
882.5
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
882.2
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
876.1
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
864.4
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
858.4
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
852.9
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
848.0
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
847.7
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
845.2
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
831.2
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
828.8
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
816.3
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
809.0
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
796.8
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
794.9
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
791.4
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
791.3
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
777.7
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
775.4
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
771.8
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
769.5
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
768.1
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
751.4
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
744.6
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
736.6
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
733.8
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
729.5
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
726.7
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
715.0
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
714.5
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
709.5
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
684.0
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
670.5
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
670.3
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
656.7
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
638.2
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
637.7
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
633.1
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
631.7
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
631.4
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
624.9
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
600.7
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
599.9
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
587.4
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
553.7
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
501.6
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
494.4
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL17 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2357.7
Number of samples
81
Samples
Sample
Description
TPM
DO46356
0 years, female, NA, stage:III, dead, 911 days
11125.3
DO46333
0 years, female, NA, stage:III, dead, 359 days
6772.2
DO46576
0 years, female, NA, stage:III, alive, 133 days
6314.2
DO46366
0 years, female, NA, stage:III, dead, 2054 days
5837.2
DO46331
0 years, female, NA, stage:III, dead, 612 days
5362.2
DO46591
0 years, female, NA, stage:III, dead, 195 days
4985.6
DO46390
0 years, female, NA, stage:III, dead, 374 days
4760.7
DO46568
0 years, female, NA, stage:III, dead, 320 days
4506.3
DO46326
0 years, female, NA, stage:III, dead, 701 days
3799.0
DO46338
0 years, female, NA, stage:III, dead, 596 days
3691.3
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
3562.4
DO46384
0 years, female, NA, stage:III, dead, 614 days
3385.0
DO46463
0 years, female, NA, stage:III, dead, 2451 days
3299.5
DO46370
0 years, female, NA, stage:III, dead, 1727 days
3266.6
DO46581
0 years, female, NA, stage:III, dead, 408 days
3245.6
DO46364
0 years, female, NA, stage:III, dead, 806 days
3016.5
DO46518
0 years, female, NA, stage:III, alive, 2960 days
2983.2
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
2953.1
DO46566
0 years, female, NA, stage:III, dead, 673 days
2937.6
DO46342
0 years, female, NA, stage:III, dead, 1398 days
2926.2
DO46493
0 years, female, NA, stage:IV, alive, 839 days
2895.0
DO46597
0 years, female, NA, stage:III, dead, 393 days
2851.3
DO46611
0 years, female, NA, stage:III, dead, 734 days
2773.6
DO46386
0 years, female, NA, stage:III, dead, 1162 days
2616.6
DO46352
0 years, female, NA, stage:III, dead, 677 days
2550.1
DO46358
0 years, female, NA, stage:III, dead, 423 days
2429.7
DO46453
0 years, female, NA, stage:III, dead, 3294 days
2417.4
DO46436
0 years, female, NA, stage:III, alive, 3193 days
2365.7
DO46533
0 years, female, NA, stage:III, alive, 3667 days
2343.5
DO46376
0 years, female, NA, stage:III, dead, 1430 days
2326.8
DO46508
0 years, female, NA, stage:III, dead, 2101 days
2221.6
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
2207.1
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
2206.4
DO46538
0 years, female, NA, stage:III, dead, 1527 days
2201.7
DO46402
0 years, female, NA, stage:III, dead, 511 days
2129.2
DO46412
0 years, female, NA, stage:III, dead, 597 days
2101.7
DO46443
0 years, female, NA, stage:III, dead, 2464 days
2069.1
DO46606
0 years, female, NA, stage:III, alive, 804 days
2048.9
DO46380
0 years, female, NA, stage:III, dead, 1423 days
2033.1
DO46328
0 years, female, NA, stage:III, dead, 972 days
1940.9
DO46350
0 years, female, NA, stage:III, dead, 886 days
1886.2
DO46392
0 years, female, NA, stage:III, dead, 628 days
1859.3
DO46561
0 years, female, NA, stage:III, dead, 195 days
1779.3
DO46362
0 years, female, NA, stage:III, dead, 1639 days
1719.6
DO46382
0 years, female, NA, stage:IV, dead, 311 days
1684.1
DO46398
0 years, female, NA, stage:III, alive, 437 days
1676.4
DO46588
0 years, female, NA, stage:III, dead, 438 days
1642.2
DO46330
0 years, female, NA, stage:III, dead, 684 days
1641.8
DO46346
0 years, female, NA, stage:III, dead, 1187 days
1624.1
DO46329
0 years, female, NA, stage:III, dead, 1699 days
1604.2
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
1574.2
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1571.9
DO46551
0 years, female, NA, stage:III, dead, 1055 days
1562.4
DO46560
0 years, female, NA, stage:IV, dead, 286 days
1526.8
DO46400
0 years, female, NA, stage:III, dead, 719 days
1496.6
DO46368
0 years, female, NA, stage:III, dead, 2879 days
1478.5
DO46432
0 years, female, NA, stage:III, alive, 2218 days
1442.5
DO46404
0 years, female, NA, stage:III, dead, 690 days
1400.2
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
1397.6
DO46336
0 years, female, NA, stage:IV, dead, 664 days
1373.8
DO46396
0 years, female, NA, stage:III, dead, 583 days
1354.3
DO46388
0 years, female, NA, stage:III, dead, 413 days
1342.8
DO46325
0 years, female, NA, stage:III, dead, 477 days
1331.1
DO46354
0 years, female, NA, stage:III, dead, 843 days
1290.1
DO46586
0 years, female, NA, stage:III, dead, 1019 days
1275.2
DO46372
0 years, female, NA, stage:III, dead, 1326 days
1272.5
DO46408
0 years, female, NA, stage:III, dead, 489 days
1233.2
DO46344
0 years, female, NA, stage:III, dead, 642 days
1208.9
DO46378
0 years, female, NA, stage:III, alive, 843 days
1188.0
DO46348
0 years, female, NA, stage:IV, dead, 287 days
1174.0
DO46374
0 years, female, NA, stage:III, dead, 1409 days
1116.6
DO46546
0 years, female, NA, stage:III, dead, 1889 days
1116.2
DO46327
0 years, female, NA, stage:III, dead, 184 days
1100.4
DO46468
0 years, female, NA, stage:III, alive, 2776 days
1038.9
DO46334
0 years, female, NA, stage:III, dead, 496 days
1037.0
DO46528
0 years, female, NA, stage:III, alive, 6139 days
998.5
DO46332
0 years, female, NA, stage:III, dead, 689 days
952.6
DO46602
0 years, female, NA, stage:III, dead, 205 days
948.9
DO46448
0 years, female, NA, stage:III, dead, 654 days
878.8
DO46571
0 years, female, NA, stage:III, dead, 243 days
868.9
DO46340
0 years, female, NA, stage:III, dead, 616 days
853.1
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
1.3
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
1.2
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
1.0
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
1.0
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
1.0
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
1.0
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.9
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.8
15524912-685a-47ce-a824-567848_D2
Tumor
0.8
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.8
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.8
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
0.8
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.7
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.7
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.7
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.7
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.7
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.7
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.7
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.7
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.7
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.7
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.7
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.7
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.7
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.7
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.7
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.7
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.6
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.6
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.6
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.6
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.6
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
0.6
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.6
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.6
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.6
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.6
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.5
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.5
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.5
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.5
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.5
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.5
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.5
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.4
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.4
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.4
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.4
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.4
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.4
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.4
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.4
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.4
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.4
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.3
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.3
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.3
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.3
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.3
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.3
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.3
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.3
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.3
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.3
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.3
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.2
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.2
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.2
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.2
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.2
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.2
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.1
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.1
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
0.1
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.1
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.1
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
0.1
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.0
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
0.0
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
0.0
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.0
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.0
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.0
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.0
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.1
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.1
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.1
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.1
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.1
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.1
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.2
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.2
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.2
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.2
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.3
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.3
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.3
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.3
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.3
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.3
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.4
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-0.4
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.4
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.5
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.5
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.