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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL17 is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 1.96
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.0027
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
67%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
59%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1041.4
Number of samples
283
Samples
Sample
Description
TPM
TCGA-C5-A8YQ-01A
79 years, female, white, stage:Stage IB, dead, 715 days
3635.1
TCGA-VS-A953-01A
63 years, female, stage:Stage IVA, dead, 477 days
3548.2
TCGA-EK-A2R8-01A
48 years, female, white, stage:Stage IB, alive, 44 days
3303.7
TCGA-LP-A5U2-01A
30 years, female, asian, stage:Stage IIIB, alive, 9 days
3275.8
TCGA-HM-A6W2-01A
34 years, female, black or african american, stage:Stage IVB, alive, 287 days
3261.3
TCGA-2W-A8YY-01A
51 years, female, white, stage:Stage IB, alive, 533 days
3006.8
TCGA-EK-A2R9-01A
58 years, female, white, stage:Stage IB, alive, 4 days
2729.5
TCGA-Q1-A73S-01A
33 years, female, white, stage:Stage IB, alive, 688 days
2705.6
TCGA-C5-A7CG-01A
55 years, female, white, stage:Stage IB, alive, 6408 days
2513.3
TCGA-FU-A57G-01A
49 years, female, white, stage:Stage IB, alive, 1078 days
2470.7
TCGA-C5-A8YT-01A
36 years, female, white, stage:Stage IB, dead, 633 days
2443.0
TCGA-JW-A5VK-01A
43 years, female, black or african american, stage:Stage IB, alive, 623 days
2420.7
TCGA-EK-A2RK-01A
67 years, female, white, stage:Stage IA, alive, 13 days
2395.2
TCGA-EA-A5FO-01A
59 years, female, white, stage:Stage IB, alive, 815 days
2379.5
TCGA-UC-A7PG-01A
44 years, female, white, stage:Stage IIIB, dead, 370 days
2320.3
TCGA-FU-A3HY-01A
47 years, female, white, stage:Stage IB, alive, 954 days
2293.7
TCGA-IR-A3LK-01A
69 years, female, white, stage:Stage IB, dead, 908 days
2290.8
TCGA-C5-A8ZZ-01A
41 years, female, white, stage:Stage IIB, alive, 636 days
2284.9
TCGA-EK-A3GJ-01A
51 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
2271.0
TCGA-C5-A902-01A
35 years, female, black or african american, stage:Stage IB, alive, 149 days
2237.2
TCGA-EK-A2RO-01A
59 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
2228.1
TCGA-DG-A2KH-01A
25 years, female, stage:Stage IB, alive, 34 days
2207.1
TCGA-EK-A2IR-01A
48 years, female, white, stage:Stage IB, alive, 3442 days
2180.1
TCGA-MU-A5YI-01A
60 years, female, black or african american, stage:Stage IA, alive, 1053 days
2150.3
TCGA-C5-A2LT-01A
38 years, female, white, stage:Stage IB, alive, 2226 days
2146.7
TCGA-FU-A40J-01A
38 years, female, white, stage:Stage IIIB, alive, 426 days
2103.9
TCGA-VS-A8EC-01A
55 years, female, white, stage:Stage IIIB, alive, 1415 days
2076.7
TCGA-C5-A7UC-01A
48 years, female, white, stage:Stage IB, dead, 523 days
2040.5
TCGA-EA-A78R-01A
54 years, female, asian, stage:Stage IB, alive, 410 days
1966.0
TCGA-R2-A69V-01A
42 years, female, white, stage:Stage IB, alive, 596 days
1964.4
TCGA-C5-A7UH-01A
55 years, female, white, stage:Stage IIIB, alive, 3988 days
1955.8
TCGA-C5-A1M8-01A
43 years, female, white, stage:Stage IB, alive, 919 days
1955.8
TCGA-C5-A1MF-01A
49 years, female, white, stage:Stage IB, alive, 1617 days
1949.2
TCGA-C5-A1MQ-01A
35 years, female, white, stage:Stage IIA, alive, 1031 days
1942.9
TCGA-EA-A50E-01A
45 years, female, asian, stage:Stage IVA, dead, 227 days
1932.8
TCGA-JX-A3Q8-01A
40 years, female, asian, stage:Stage IB, alive, 1357 days
1932.7
TCGA-DG-A2KK-01A
51 years, female, stage:Stage IIIB, alive, 2496 days
1929.4
TCGA-MY-A5BE-01A
42 years, female, black or african american, stage:Stage IB, alive, 1066 days
1911.0
TCGA-MY-A913-01A
28 years, female, black or african american, stage:Stage IIA, alive, 524 days
1846.3
TCGA-WL-A834-01A
57 years, female, white, stage:'--, alive, 791 days
1831.5
TCGA-Q1-A73O-01A
37 years, female, stage:Stage IB, alive, 428 days
1804.4
TCGA-EK-A2PM-01A
81 years, female, white, stage:Stage IIB, alive, 18 days
1801.6
TCGA-Q1-A5R2-01A
64 years, female, white, stage:'--, alive, 499 days
1786.9
TCGA-VS-A9UJ-01A
55 years, female, stage:Stage IIB, dead, 52 days
1779.4
TCGA-DS-A1OA-01A
77 years, female, asian, stage:Stage IB, dead, 879 days
1776.9
TCGA-EA-A410-01A
51 years, female, white, stage:Stage IIA, alive, 803 days
1770.4
TCGA-C5-A905-01A
37 years, female, black or african american, stage:Stage IB, alive, 4879 days
1769.2
TCGA-DS-A7WF-01A
41 years, female, stage:Stage IB, dead, 492 days
1767.9
TCGA-EK-A2RE-01A
26 years, female, white, stage:Stage IIA, alive, 57 days
1760.9
TCGA-EA-A3HR-01A
57 years, female, white, stage:Stage II, alive, 940 days
1749.5
TCGA-C5-A8XI-01A
69 years, female, black or african american, stage:Stage IB, alive, 254 days
1737.4
TCGA-VS-A9U7-01A
30 years, female, white, stage:Stage IB, alive, 1472 days
1731.3
TCGA-EK-A2H1-01A
20 years, female, white, stage:Stage IB, alive, 799 days
1723.2
TCGA-JX-A5QV-01A
37 years, female, white, stage:Stage IB, alive, 636 days
1707.0
TCGA-MA-AA43-01A
48 years, female, white, stage:Stage IIIB, alive, 346 days
1680.8
TCGA-C5-A1MK-01A
79 years, female, white, stage:Stage IIIB, dead, 74 days
1680.1
TCGA-EX-A1H5-01A
58 years, female, black or african american, stage:Stage IIB, alive, 619 days
1674.9
TCGA-C5-A1MH-01A
71 years, female, white, stage:Stage IIIB, dead, 1186 days
1672.8
TCGA-EA-A3QD-01A
59 years, female, white, stage:Stage IIIB, alive, 397 days
1670.3
TCGA-EX-A69L-01A
41 years, female, asian, stage:Stage IB, alive, 602 days
1667.9
TCGA-DS-A0VL-01A
25 years, female, white, stage:Stage IB, dead, 1692 days
1657.0
TCGA-LP-A4AU-01A
35 years, female, asian, stage:Stage IIIB, alive, 343 days
1650.0
TCGA-VS-A8QM-01A
47 years, female, stage:Stage IVB, dead, 951 days
1643.0
TCGA-EK-A2H0-01A
24 years, female, white, stage:Stage IIB, alive, 1847 days
1642.8
TCGA-ZX-AA5X-01A
64 years, female, white, stage:Stage IIIB, alive, 119 days
1641.1
TCGA-C5-A7CO-01A
68 years, female, white, stage:Stage IB, alive, 4482 days
1636.3
TCGA-Q1-A6DV-01A
36 years, female, asian, stage:Stage IB, alive, 491 days
1632.9
TCGA-VS-A958-01A
46 years, female, white, stage:Stage IIB, alive, 1525 days
1620.5
TCGA-EA-A44S-01A
31 years, female, white, stage:Stage IIIB, alive, 369 days
1607.9
TCGA-MY-A5BF-01A
68 years, female, white, stage:Stage IIA, alive, 634 days
1606.8
TCGA-LP-A5U3-01A
40 years, female, asian, stage:Stage IB, alive, 25 days
1596.2
TCGA-EK-A3GK-01A
33 years, female, white, stage:Stage IB, alive, 15 days
1592.8
TCGA-VS-A9UB-01A
54 years, female, stage:Stage IIB, alive, 911 days
1592.3
TCGA-EK-A2RJ-01A
51 years, female, white, stage:Stage IB, alive, 53 days
1591.8
TCGA-Q1-A73Q-01A
46 years, female, white, stage:Stage I, alive, 284 days
1579.9
TCGA-EA-A97N-01A
38 years, female, white, stage:Stage IB, alive, 11 days
1571.8
TCGA-4J-AA1J-01A
31 years, female, white, stage:Stage IB, alive, 542 days
1561.7
TCGA-DS-A0VM-01A
51 years, female, white, stage:Stage IB, alive, 3589 days
1560.6
TCGA-BI-A20A-01A
49 years, female, white, stage:Stage IB, alive, 720 days
1535.9
TCGA-VS-A8EL-01A
38 years, female, black or african american, stage:Stage IIB, alive, 1992 days
1525.5
TCGA-EK-A3GN-01A
47 years, female, white, stage:Stage IIIB, alive, 27 days
1524.6
TCGA-C5-A8XK-01A
30 years, female, black or african american, stage:'--, alive, 3039 days
1519.6
TCGA-C5-A1MN-01A
42 years, female, white, stage:Stage IIIB, dead, 1245 days
1512.3
TCGA-DS-A1OD-01A
49 years, female, white, stage:Stage IB, alive, 3874 days
1512.2
TCGA-FU-A770-01A
33 years, female, white, stage:Stage IIIB, alive, 34 days
1510.0
TCGA-EA-A5ZD-01A
40 years, female, asian, stage:Stage IB, alive, 830 days
1502.6
TCGA-VS-A9UV-01A
74 years, female, stage:Stage IVA, dead, 104 days
1497.7
TCGA-MA-AA42-01A
75 years, female, white, stage:Stage IIB, alive, 259 days
1493.9
TCGA-EK-A2RC-01A
33 years, female, stage:Stage IB, alive, 129 days
1487.5
TCGA-EK-A2PK-01A
43 years, female, white, stage:Stage IB, alive, 12 days
1486.3
TCGA-Q1-A6DW-01A
44 years, female, white, stage:Stage I, alive, 534 days
1484.4
TCGA-JX-A3Q0-01A
63 years, female, black or african american, stage:Stage III, alive, 6375 days
1479.5
TCGA-Q1-A73R-01A
45 years, female, white, stage:Stage I, alive, 567 days
1476.3
TCGA-C5-A907-01A
47 years, female, white, stage:Stage IB, alive, 448 days
1475.0
TCGA-FU-A23L-01A
60 years, female, white, stage:Stage IIA, alive, 725 days
1460.6
TCGA-ZJ-A8QR-01A
38 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
1458.7
TCGA-VS-A9V2-01A
29 years, female, white, stage:Stage IB, alive, 555 days
1455.4
TCGA-DS-A3LQ-01A
46 years, female, stage:Stage IIIB, alive, 699 days
1447.9
TCGA-EA-A439-01A
50 years, female, asian, stage:Stage IIA, alive, 965 days
1440.5
TCGA-EX-A449-01A
42 years, female, white, stage:Stage IVB, alive, 447 days
1437.2
TCGA-C5-A7CK-01A
58 years, female, white, stage:Stage IVA, dead, 4086 days
1422.0
TCGA-FU-A3WB-01A
43 years, female, white, stage:Stage IIA, alive, 491 days
1421.3
TCGA-DS-A0VN-01A
47 years, female, white, stage:Stage IB, alive, 3609 days
1415.8
TCGA-C5-A7UI-01A
42 years, female, black or african american, stage:Stage IB, dead, 2888 days
1398.2
TCGA-DS-A5RQ-01A
80 years, female, white, stage:Stage IB, alive, 512 days
1397.8
TCGA-DS-A1OB-01A
45 years, female, white, stage:Stage IB, dead, 861 days
1395.5
TCGA-ZJ-AAX4-01A
85 years, female, white, stage:Stage II, alive, 21 days
1394.5
TCGA-VS-AA62-01A
51 years, female, white, stage:Stage IIB, dead, 469 days
1378.7
TCGA-VS-A94Y-01A
47 years, female, white, stage:Stage IIB, dead, 144 days
1375.1
TCGA-EK-A2PG-01A
88 years, female, black or african american, stage:'--, alive, 46 days
1369.9
TCGA-RA-A741-01A
34 years, female, white, stage:Stage IIB, alive, 444 days
1369.4
TCGA-VS-A9UY-01A
29 years, female, stage:Stage IVB, dead, 555 days
1367.1
TCGA-C5-A1M9-01A
46 years, female, white, stage:Stage IB, dead, 1065 days
1363.1
TCGA-VS-A94Z-01A
38 years, female, white, stage:Stage IIB, alive, 1015 days
1360.6
TCGA-EA-A3Y4-01A
40 years, female, white, stage:Stage IB, alive, 1122 days
1344.4
TCGA-EA-A4BA-01A
49 years, female, white, stage:Stage IB, alive, 755 days
1343.6
TCGA-C5-A2M1-01A
37 years, female, white, stage:Stage IB, alive, 1169 days
1343.5
TCGA-JW-A5VL-01A
37 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
1334.9
TCGA-IR-A3LF-01A
64 years, female, white, stage:Stage IB, alive, 2949 days
1330.7
TCGA-HM-A3JJ-01A
40 years, female, black or african american, stage:Stage IB, dead, 659 days
1284.3
TCGA-BI-A0VR-01A
53 years, female, white, stage:Stage IIIB, alive, 1505 days
1281.2
TCGA-C5-A1M7-01A
37 years, female, white, stage:Stage IB, alive, 1409 days
1271.4
TCGA-VS-A8QF-01A
42 years, female, white, stage:Stage IIB, alive, 1800 days
1271.2
TCGA-EA-A6QX-01A
49 years, female, asian, stage:Stage IIIB, alive, 730 days
1269.9
TCGA-VS-A9V3-01A
62 years, female, white, stage:Stage IVB, alive, 540 days
1267.0
TCGA-DG-A2KL-01A
53 years, female, stage:Stage IIA, alive, 1367 days
1260.0
TCGA-FU-A5XV-01A
32 years, female, white, stage:Stage IIIB, alive, 321 days
1257.1
TCGA-C5-A7CH-01A
43 years, female, white, stage:Stage IIB, alive, 4694 days
1257.1
TCGA-VS-A8EK-01A
65 years, female, white, stage:Stage IVA, dead, 829 days
1234.2
TCGA-XS-A8TJ-01A
41 years, female, black or african american, stage:Stage IB, alive, 890 days
1232.5
TCGA-EK-A2RB-01A
48 years, female, white, stage:Stage IVB, alive, 9 days
1226.5
TCGA-LP-A4AX-01A
45 years, female, asian, stage:Stage IB, alive, 380 days
1222.8
TCGA-MA-AA3X-01A
50 years, female, black or african american, stage:Stage IIIB, alive, 617 days
1209.2
TCGA-VS-A8Q9-01A
79 years, female, white, stage:Stage IB, alive, 1630 days
1204.5
TCGA-EA-A411-01A
50 years, female, white, stage:Stage IB, alive, 747 days
1186.0
TCGA-MU-A51Y-01A
27 years, female, white, stage:Stage IIA, alive, 854 days
1183.0
TCGA-C5-A7XC-01A
26 years, female, white, stage:Stage IB, alive, 1551 days
1181.5
TCGA-C5-A1MI-01A
50 years, female, white, stage:Stage IB, dead, 1083 days
1166.8
TCGA-VS-A9UH-01A
53 years, female, black or african american, stage:Stage IVA, alive, 1427 days
1166.5
TCGA-EX-A8YF-01A
44 years, female, white, stage:Stage IB, alive, 473 days
1145.4
TCGA-IR-A3LA-01A
60 years, female, white, stage:Stage IB, alive, 4172 days
1141.3
TCGA-C5-A1BL-01A
32 years, female, white, stage:Stage IB, alive, 5271 days
1140.9
TCGA-HM-A4S6-01A
51 years, female, white, stage:Stage IIIB, alive, 454 days
1132.5
TCGA-C5-A8XJ-01A
74 years, female, white, stage:Stage IB, alive, 4467 days
1129.2
TCGA-FU-A3YQ-01A
35 years, female, white, stage:Stage IB, alive, 861 days
1127.8
TCGA-VS-A9UM-01A
39 years, female, black or african american, stage:Stage IVB, dead, 829 days
1119.2
TCGA-MU-A8JM-01A
46 years, female, white, stage:Stage IB, alive, 607 days
1118.7
TCGA-C5-A1BM-01A
78 years, female, black or african american, stage:Stage IB, dead, 2520 days
1106.5
TCGA-C5-A7UE-01A
45 years, female, white, stage:Stage IB, alive, 4738 days
1105.4
TCGA-VS-A8EG-01A
36 years, female, stage:Stage IB, alive, 1386 days
1094.0
TCGA-VS-A950-01A
42 years, female, stage:Stage IIIA, alive, 1221 days
1087.7
TCGA-C5-A3HL-01A
76 years, female, white, stage:Stage IB, alive, 621 days
1085.8
TCGA-VS-A9V4-01A
63 years, female, white, stage:Stage IVA, dead, 132 days
1085.0
TCGA-VS-A9UC-01A
32 years, female, stage:Stage IIB, alive, 825 days
1081.7
TCGA-MA-AA3Z-01A
43 years, female, white, stage:Stage IB, alive, 595 days
1078.3
TCGA-FU-A3TQ-01A
55 years, female, white, stage:Stage IIIB, alive, 795 days
1053.8
TCGA-HG-A2PA-01A
38 years, female, white, stage:Stage IB, dead, 773 days
1035.7
TCGA-IR-A3LL-01A
60 years, female, white, stage:Stage IB, alive, 1106 days
1031.6
TCGA-EA-A1QT-01A
47 years, female, white, stage:Stage IB, alive, 1243 days
1007.9
TCGA-EX-A3L1-01A
32 years, female, white, stage:Stage IIA, alive, 463 days
1001.6
TCGA-VS-A8QH-01A
76 years, female, white, stage:Stage IB, dead, 1210 days
999.5
TCGA-VS-A9UZ-01A
61 years, female, white, stage:Stage IB, alive, 2044 days
975.2
TCGA-C5-A1M6-01A
55 years, female, white, stage:Stage IIB, dead, 955 days
961.0
TCGA-Q1-A73P-01A
45 years, female, white, stage:Stage IB, alive, 483 days
942.9
TCGA-C5-A2LS-01A
37 years, female, white, stage:Stage IB, alive, 1345 days
934.1
TCGA-EA-A3QE-01A
45 years, female, white, stage:Stage IB, alive, 761 days
926.9
TCGA-DR-A0ZL-01A
53 years, female, asian, stage:Stage IB, alive, 2669 days
910.3
TCGA-VS-A9UI-01A
76 years, female, white, stage:Stage IIB, dead, 1372 days
907.5
TCGA-EK-A2RM-01A
40 years, female, white, stage:Stage IB, alive, 50 days
902.6
TCGA-BI-A0VS-01A
48 years, female, white, stage:Stage IB, alive, 1735 days
886.0
TCGA-VS-A9UD-01A
73 years, female, white, stage:Stage IIIA, alive, 739 days
871.3
TCGA-DG-A2KM-01A
46 years, female, stage:Stage IB, alive, 1946 days
847.3
TCGA-C5-A2M2-01A
56 years, female, white, stage:Stage IB, dead, 1011 days
828.8
TCGA-EK-A2GZ-01A
64 years, female, black or african american, stage:Stage IIIB, alive, 383 days
821.1
TCGA-EK-A2RL-01A
32 years, female, black or african american, stage:Stage IB, dead, 1453 days
811.1
TCGA-VS-A9UR-01A
53 years, female, white, stage:Stage IIA, alive, 793 days
797.2
TCGA-VS-A9UQ-01A
32 years, female, stage:Stage IB, alive, 1263 days
785.4
TCGA-FU-A3EO-01A
55 years, female, white, stage:Stage IIB, alive, 490 days
757.9
TCGA-C5-A7X8-01A
35 years, female, white, stage:Stage IB, alive, 83 days
747.8
TCGA-JW-A69B-01A
44 years, female, white, stage:Stage IB, alive, 863 days
747.0
TCGA-VS-A9UO-01A
43 years, female, white, stage:Stage IIB, alive, 1456 days
717.6
TCGA-VS-A952-01A
66 years, female, white, stage:Stage IB, alive, 1778 days
696.3
TCGA-C5-A8XH-01A
39 years, female, white, stage:Stage IB, dead, 1394 days
675.6
TCGA-Q1-A5R3-01A
56 years, female, white, stage:'--, alive, 485 days
656.9
TCGA-VS-A9U6-01A
52 years, female, white, stage:Stage IVB, alive, 1320 days
543.3
TCGA-IR-A3LI-01A
48 years, female, white, stage:Stage IVB, alive, 2493 days
519.3
TCGA-IR-A3LB-01A
53 years, female, white, stage:Stage IB, dead, 2032 days
495.1
TCGA-C5-A2LV-01A
36 years, female, black or african american, stage:Stage IB, alive, 2234 days
307.5
TCGA-JW-A5VH-01A
53 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
256.1
TCGA-FU-A3HZ-01A
64 years, female, white, stage:Stage IIA, alive, 1103 days
250.0
TCGA-HM-A3JK-01A
64 years, female, white, stage:Stage IIA, alive, 632 days
232.4
TCGA-EA-A3HS-01A
35 years, female, white, stage:Stage IB, alive, 959 days
200.8
TCGA-VS-A94W-01A
39 years, female, white, stage:Stage IIB, alive, 1243 days
198.9
TCGA-MA-AA41-01A
33 years, female, white, stage:Stage IIB, alive, 279 days
195.9
TCGA-C5-A2LX-01A
54 years, female, white, stage:Stage IB, alive, 2526 days
194.5
TCGA-MY-A5BD-01A
62 years, female, white, stage:Stage IIB, alive, 1667 days
188.4
TCGA-JW-A5VJ-01A
56 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
179.5
TCGA-FU-A2QG-01A
29 years, female, white, stage:Stage IB, alive, 579 days
168.4
TCGA-GH-A9DA-01A
27 years, female, white, stage:Stage IB, alive, 540 days
168.1
TCGA-ZJ-A8QQ-01A
24 years, female, white, stage:Stage IIB, alive, 2056 days
164.8
TCGA-FU-A3NI-01A
45 years, female, white, stage:Stage IB, dead, 638 days
156.9
TCGA-C5-A7X3-01A
70 years, female, white, stage:Stage IIIB, dead, 284 days
153.7
TCGA-VS-A8QC-01A
51 years, female, white, stage:Stage IVA, dead, 350 days
149.8
TCGA-C5-A2LZ-01A
65 years, female, white, stage:Stage IIIB, dead, 3046 days
148.5
TCGA-FU-A3TX-01A
78 years, female, stage:Stage IB, alive, 45 days
148.1
TCGA-C5-A3HE-01A
44 years, female, white, stage:Stage IB, alive, 548 days
142.9
TCGA-UC-A7PD-01A
21 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
142.6
TCGA-C5-A3HF-01A
24 years, female, white, stage:Stage IB, dead, 543 days
126.2
TCGA-JW-A5VG-01A
35 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
125.6
TCGA-EA-A5O9-01A
39 years, female, white, stage:Stage IB, alive, 788 days
124.9
TCGA-ZJ-AAXU-01A
51 years, female, white, stage:Stage IIB, alive, 5 days
124.2
TCGA-EA-A3HQ-01A
60 years, female, white, stage:Stage II, alive, 1136 days
123.5
TCGA-MA-AA3Y-01A
48 years, female, white, stage:Stage IB, alive, 542 days
121.9
TCGA-EA-A43B-01A
43 years, female, white, stage:Stage IB, alive, 791 days
121.6
TCGA-DS-A7WI-01A
43 years, female, white, stage:Stage IIA, dead, 252 days
121.2
TCGA-FU-A23K-01A
28 years, female, white, stage:Stage IIIB, alive, 372 days
115.5
TCGA-DS-A0VK-01A
45 years, female, white, stage:Stage IB, dead, 1118 days
114.9
TCGA-EA-A3HT-01A
68 years, female, white, stage:Stage IB, alive, 954 days
112.0
TCGA-IR-A3L7-01A
37 years, female, white, stage:Stage IB, alive, 4483 days
104.9
TCGA-UC-A7PF-01A
44 years, female, stage:Stage IB, dead, 2859 days
100.9
TCGA-ZJ-AAXA-01A
64 years, female, white, stage:Stage IB, alive, 43 days
99.6
TCGA-C5-A7X5-01A
72 years, female, black or african american, stage:Stage IVB, dead, 414 days
96.9
TCGA-C5-A1MJ-01A
61 years, female, white, stage:Stage IB, dead, 14 days
95.9
TCGA-EA-A5ZF-01A
56 years, female, asian, stage:Stage IB, alive, 828 days
95.7
TCGA-EA-A5ZE-01A
54 years, female, asian, stage:Stage IB, alive, 829 days
94.5
TCGA-VS-A8EJ-01A
60 years, female, white, stage:Stage IIB, dead, 607 days
94.0
TCGA-VS-A954-01A
67 years, female, stage:Stage IIIB, alive, 1714 days
92.5
TCGA-VS-A9UU-01A
42 years, female, stage:Stage IIB, alive, 442 days
92.4
TCGA-JW-AAVH-01A
46 years, female, white, stage:Stage IB, alive, 552 days
92.2
TCGA-UC-A7PI-01A
44 years, female, white, stage:Stage IB, alive, 2114 days
90.3
TCGA-C5-A901-01A
44 years, female, white, stage:'--, alive, 518 days
87.8
TCGA-VS-A9V5-01A
50 years, female, white, stage:Stage IIB, dead, 494 days
84.8
TCGA-VS-A94X-01A
40 years, female, black or african american, stage:Stage IIB, dead, 506 days
82.3
TCGA-EA-A556-01A
38 years, female, white, stage:Stage IB, alive, 453 days
80.1
TCGA-DS-A7WH-01A
34 years, female, white, stage:Stage IB, alive, 533 days
79.8
TCGA-C5-A1BJ-01A
34 years, female, white, stage:Stage IIB, alive, 4385 days
79.7
TCGA-VS-A8EB-01A
41 years, female, white, stage:Stage IIIB, dead, 305 days
79.5
TCGA-C5-A7CJ-01A
42 years, female, white, stage:Stage IIA, dead, 3097 days
78.0
TCGA-JX-A3PZ-01A
25 years, female, white, stage:Stage IB, dead, 642 days
76.5
TCGA-C5-A8YR-01A
56 years, female, white, stage:Stage IB, dead, 837 days
76.4
TCGA-JW-A852-01A
42 years, female, white, stage:Stage IIB, dead, 252 days
75.4
TCGA-VS-A9UP-01A
43 years, female, stage:Stage IIA, alive, 1444 days
74.5
TCGA-VS-A8EH-01A
56 years, female, stage:Stage IIIB, alive, 986 days
74.2
TCGA-EA-A1QS-01A
46 years, female, white, stage:Stage IB, alive, 1203 days
73.2
TCGA-VS-A957-01A
64 years, female, white, stage:Stage IB, alive, 1688 days
71.7
TCGA-EA-A3HU-01A
43 years, female, white, stage:Stage II, alive, 1013 days
69.5
TCGA-IR-A3LC-01A
40 years, female, white, stage:Stage IB, alive, 3935 days
66.5
TCGA-LP-A7HU-01A
53 years, female, asian, stage:Stage II, alive, 406 days
66.3
TCGA-VS-A9UT-01A
72 years, female, asian, stage:Stage IB, alive, 482 days
66.1
TCGA-C5-A7CM-01A
35 years, female, white, stage:Stage IB, alive, 619 days
65.6
TCGA-VS-A9V0-01A
58 years, female, stage:Stage IB, alive, 573 days
64.8
TCGA-LP-A4AW-01A
52 years, female, asian, stage:Stage IA, alive, 27 days
64.4
TCGA-C5-A1M5-01A
53 years, female, white, stage:Stage IB, dead, 2052 days
63.1
TCGA-EK-A2R7-01A
45 years, female, white, stage:Stage IB, alive, 27 days
61.9
TCGA-C5-A0TN-01A
21 years, female, black or african american, stage:Stage IB, dead, 348 days
56.3
TCGA-EK-A2PI-01A
44 years, female, white, stage:Stage IIIB, alive, 586 days
54.0
TCGA-EK-A2PL-01A
36 years, female, white, stage:Stage IIIB, alive, 13 days
53.0
TCGA-C5-A2LY-01A
30 years, female, white, stage:Stage IB, alive, 2383 days
52.8
TCGA-C5-A1ME-01A
40 years, female, white, stage:Stage IB, alive, 1756 days
51.3
TCGA-IR-A3LH-01A
49 years, female, black or african american, stage:Stage IIA, alive, 2394 days
50.7
TCGA-EK-A2RA-01A
74 years, female, stage:Stage IIA, alive, 1246 days
50.0
TCGA-DS-A1O9-01A
75 years, female, white, stage:Stage IVA, dead, 266 days
48.8
TCGA-PN-A8MA-01A
43 years, female, black or african american, stage:Stage IIB, alive, 90 days
44.9
TCGA-Q1-A6DT-01A
55 years, female, white, stage:Stage I, dead, 275 days
44.5
TCGA-C5-A1MP-01A
34 years, female, black or african american, stage:Stage IB, alive, 109 days
41.5
TCGA-MA-AA3W-01A
54 years, female, white, stage:Stage IB, alive, 685 days
37.6
TCGA-EX-A69M-01A
62 years, female, white, stage:Stage IB, dead, 253 days
37.5
TCGA-C5-A1ML-01A
49 years, female, white, stage:Stage IB, dead, 636 days
37.4
TCGA-EK-A2IP-01A
28 years, female, white, stage:Stage IB, alive, 202 days
36.2
TCGA-EK-A2RN-01A
45 years, female, white, stage:Stage IB, alive, 71 days
33.3
TCGA-DS-A1OC-01A
47 years, female, white, stage:Stage IB, alive, 376 days
30.7
TCGA-C5-A7CL-01A
48 years, female, white, stage:Stage IIIB, dead, 471 days
28.9
TCGA-VS-A8Q8-01A
26 years, female, white, stage:Stage IB, dead, 978 days
28.4
TCGA-JW-A5VI-01A
45 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
28.4
TCGA-VS-A9U5-01A
57 years, female, white, stage:Stage IIB, alive, 1535 days
25.8
TCGA-VS-A9UL-01A
79 years, female, white, stage:Stage IIIB, dead, 442 days
24.3
TCGA-DR-A0ZM-01A
61 years, female, white, stage:Stage IIIB, alive, 1791 days
21.3
TCGA-Q1-A5R1-01A
32 years, female, white, stage:Stage IB, alive, 474 days
20.9
TCGA-VS-A8EI-01A
38 years, female, white, stage:Stage IIB, alive, 729 days
18.0
TCGA-VS-A9V1-01A
46 years, female, white, stage:Stage IVB, dead, 157 days
0.0
TCGA-VS-A8QA-01A
44 years, female, stage:Stage IB, alive, 1099 days
0.0
TCGA-VS-A959-01A
76 years, female, stage:Stage IIB, alive, 1561 days
0.0
TCGA-DG-A2KJ-01A
50 years, female, stage:Stage IIIB, alive, 2893 days
0.0
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.