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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GTF2I is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
125.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
105.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
92.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
86.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
82.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
79.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
75.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
74.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
73.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
70.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
65.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
63.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
63.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
62.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
62.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
60.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
54.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
53.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
53.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
52.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
50.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
49.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
48.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
46.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
43.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
40.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
39.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
39.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
39.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
38.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
38.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
37.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
36.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
36.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
35.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
33.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
32.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
32.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
32.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
27.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
26.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
26.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
26.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
24.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
24.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
23.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
22.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
22.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
21.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
21.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
19.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
19.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
18.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
16.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
16.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
15.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
7.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GTF2I is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
150.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
143.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
138.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
121.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
120.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
119.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
119.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
115.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
112.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
112.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
112.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
110.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
109.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
108.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
106.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
106.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
105.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
104.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
103.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
102.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
102.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
101.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
101.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
98.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
98.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
97.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
96.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
96.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
96.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
95.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
94.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
94.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
94.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
93.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
93.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
92.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
92.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
92.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
91.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
91.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
91.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
90.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
90.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
89.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
89.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
89.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
89.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
89.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
88.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
88.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
87.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
87.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
87.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
87.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
86.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
86.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
85.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
85.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
85.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
84.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
84.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
84.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
84.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
83.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
83.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
83.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
83.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
82.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
82.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
82.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
82.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
82.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
81.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
80.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
80.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
80.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
80.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
80.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
79.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
79.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
79.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
78.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
78.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
78.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
78.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
78.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
78.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
77.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
77.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
77.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
77.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
77.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
77.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
76.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
76.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
75.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
75.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
75.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
75.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
75.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
74.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
74.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
74.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
74.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
74.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
74.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
73.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
73.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
73.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
73.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
73.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
73.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
72.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
72.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
72.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
72.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
72.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
72.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
72.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
72.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
72.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
72.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
72.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
71.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
71.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
71.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
71.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
70.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
70.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
70.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
70.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
69.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
69.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
69.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
68.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
68.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
68.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
67.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
67.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
67.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
67.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
67.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
67.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
67.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
67.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
67.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
67.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
66.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
66.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
66.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
66.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
66.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
66.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
66.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
66.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
66.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
66.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
66.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
65.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
65.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
65.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
65.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
65.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
65.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
64.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
64.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
64.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
64.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
63.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
63.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
63.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
63.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
63.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
63.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
63.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
63.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
63.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
63.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
62.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
62.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
62.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
62.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
62.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
62.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
61.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
61.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
61.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
61.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
61.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
61.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
61.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
61.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
61.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
60.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
60.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
60.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
60.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
60.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
60.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
60.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
60.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
60.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
60.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
60.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
60.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
59.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
59.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
59.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
59.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
59.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
59.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
59.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
58.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
58.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
58.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
58.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
58.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
58.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
57.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
57.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
57.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
57.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
57.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
57.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
57.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
57.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
57.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
57.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
56.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
56.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
56.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
56.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
56.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
55.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
55.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
55.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
55.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
55.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
55.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
55.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
54.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
54.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
54.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
54.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
54.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
54.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
54.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
53.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
53.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
53.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
53.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
53.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
52.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
52.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
52.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
52.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
52.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
52.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
52.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
51.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
51.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
51.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
51.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
51.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
51.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
51.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
51.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
51.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
50.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
50.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
50.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
50.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
50.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
50.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
50.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
50.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
50.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
49.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
49.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
49.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
49.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
49.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
49.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
49.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
49.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
49.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
49.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
49.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
49.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
49.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
49.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
49.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
49.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
48.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
48.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
48.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
48.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
48.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
48.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
48.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
47.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
47.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
47.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
47.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
47.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
46.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
46.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
46.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
46.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
46.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
46.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
46.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
46.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
46.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
46.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
46.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
45.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
45.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
45.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
45.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
45.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
45.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
44.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
44.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
44.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
44.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
44.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
44.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
44.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
44.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
43.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
43.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
43.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
43.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
43.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
43.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
43.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
43.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
42.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
42.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
42.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
42.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
41.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
41.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
41.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
41.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
41.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
41.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
41.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
41.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
40.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
40.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
40.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
40.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
39.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
39.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
38.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
38.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
38.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
38.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
38.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
38.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
37.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
37.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
37.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
37.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
37.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
37.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
37.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
36.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
36.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
36.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
36.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
36.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
36.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
36.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
35.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
35.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
35.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
35.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
35.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
34.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
34.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
34.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
34.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
34.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
34.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
33.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
33.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
32.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
32.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
32.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
32.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
31.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
31.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
31.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
31.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
31.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
31.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
31.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
31.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
30.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
30.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
30.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
30.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
30.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
30.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
30.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
30.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
29.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
29.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
28.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
28.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
28.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
28.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
28.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
28.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
28.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
27.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
27.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
27.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
27.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
27.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
27.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
27.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
26.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
26.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
26.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
25.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
24.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
24.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
24.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
24.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
23.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
23.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
23.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
23.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
23.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
23.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
23.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
22.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
22.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
22.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
22.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
21.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
21.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
21.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
20.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
19.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
19.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
19.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
19.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
18.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
18.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
17.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
17.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
17.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
16.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
15.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
15.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
14.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
14.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
14.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
13.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
12.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GTF2I is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
81.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
216.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
137.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
135.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
127.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
125.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
124.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
119.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
118.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
114.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
112.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
112.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
112.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
111.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
107.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
106.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
104.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
103.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
103.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
103.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
102.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
101.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
99.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
99.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
98.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
98.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
97.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
97.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
97.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
95.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
94.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
94.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
94.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
94.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
94.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
93.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
93.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
93.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
92.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
91.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
91.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
89.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
89.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
89.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
89.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
87.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
87.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
87.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
86.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
86.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
85.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
85.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
85.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
84.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
82.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
82.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
81.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
81.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
80.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
80.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
79.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
78.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
77.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
76.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
75.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
75.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
75.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
74.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
74.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
73.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
73.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
73.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
72.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
72.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
68.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
64.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
59.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
56.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
54.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
53.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
52.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
51.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
51.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
50.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
50.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
47.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
45.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
45.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
45.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
44.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
44.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
42.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
41.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
40.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
38.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
36.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
34.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
34.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
29.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
16.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GTF2I is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
268.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
226.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
214.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
167.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
161.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
161.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
160.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
151.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
148.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
143.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
142.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
141.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
140.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
139.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
134.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
130.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
127.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
127.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
123.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
113.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
111.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
111.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
109.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
107.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
107.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
107.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
105.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
104.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
104.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
104.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
99.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
98.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
98.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
97.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
97.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
96.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
96.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
95.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
94.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
94.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
93.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
92.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
92.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
92.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
90.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
88.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
88.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
87.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
87.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
85.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
85.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
84.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
83.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
82.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
82.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
82.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
81.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
81.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
80.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
79.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
79.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
78.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
78.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
77.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
76.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
76.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
76.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
76.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
74.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
74.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
73.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
73.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
72.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
71.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
71.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
70.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
69.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
69.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
67.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
67.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
66.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
66.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
65.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
64.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
64.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
63.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
62.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
62.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
61.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
61.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
61.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
61.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
60.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
60.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
60.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
60.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
58.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
58.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
58.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
58.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
58.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
57.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
57.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
56.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
56.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
55.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
54.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
54.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
53.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
52.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
51.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
51.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
51.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
50.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
49.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
49.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
49.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
48.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
48.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
48.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
48.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
47.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
47.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
47.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
46.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
46.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
46.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
46.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
45.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
45.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
45.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
45.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
45.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
44.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
43.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
43.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
43.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
42.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
42.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
42.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
41.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
41.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
41.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
41.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
41.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
40.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
40.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
40.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
40.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
39.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
39.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
38.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
38.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
37.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
36.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
36.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
36.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
36.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
36.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
36.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
34.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
34.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
34.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
33.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
33.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
33.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
33.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
33.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
31.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
31.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
31.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
30.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
30.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
29.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
29.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
29.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
29.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
29.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
29.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
29.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
28.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
28.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
28.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
28.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
27.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
27.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
26.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
26.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
26.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
26.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
26.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
26.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
25.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
24.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
23.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
23.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
23.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
22.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
22.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
21.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
20.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
19.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
19.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
19.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
18.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
18.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
18.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
17.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
17.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
16.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
16.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
15.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
15.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
15.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
15.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
14.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
14.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
13.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
12.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
12.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
12.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
12.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
10.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
9.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
9.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
7.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
4.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0014450004
Tumor
0.8
CPT0011410003
Tumor
0.7
CPT0085670003
Tumor
0.6
CPT0019130003
Tumor
0.5
CPT0088970003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0012640003
Normal
0.4
CPT0010160003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0088480003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0079510001
Normal
0.2
CPT0079300001
Normal
0.2
CPT0081990003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0015730003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0086870003
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0075170001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0020020001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0007470001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0021240003
Tumor
-0.2
CPT0013790003
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0000640003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0079180003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0012550003
Tumor
-0.3
CPT0088550004
Tumor
-0.3
CPT0001180009
Tumor
-0.4
CPT0076330003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.