PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:116.0 nTPM
FANTOM5:92.4 Scaled Tags Per Million
Pig:103.5 nTPM
Mouse:54.0 nTPM
Allen mouse:3.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 116.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 109.5
2188 Female, age 91, both hemispheres 116.9
2090 Male, age 80, both hemispheres 111.4
2301 Female, age 85, both hemispheres 105.3
1984 Male, age 76, both hemispheres 104.3
Area postrema
nTPM: 102.5
2799 Male, age 61, both hemispheres 105.6
2054 Male, age 76, both hemispheres 101.0
2306 Male, age 80, both hemispheres 101.0
Dorsal cochlear nucleus
nTPM: 107.3
2378 Male, age 80, both hemispheres 113.0
2187 Female, age 91, both hemispheres 111.0
2802 Male, age 74, right hemisphere 110.4
2370 Male, age 61, both hemispheres 101.2
2058 Male, age 76, both hemispheres 100.6
Dorsal medullary reticular nucleus
nTPM: 104.5
2088 Male, age 76, both hemispheres 106.6
2040 Female, age 85, both hemispheres 105.8
2373 Male, age 61, both hemispheres 100.9
Dorsal motor vagal complex
nTPM: 101.2
2185 Male, age 76, both hemispheres 108.3
2813 Female, age 72, unknown 104.1
2807 Female, age 85, both hemispheres 103.8
2000 Male, age 74, unknown 101.9
2643 Male, age 74, both hemispheres 100.7
2844 Male, age 55, unknown 98.6
2797 Male, age 61, both hemispheres 97.0
2133 Female, age 91, both hemispheres 95.5
Dorsal tegmental nucleus
nTPM: 105.1
2326 Male, age 74, both hemispheres 107.7
1936 Male, age 76, left hemisphere 106.8
2083 Male, age 80, both hemispheres 103.6
2358 Male, age 61, both hemispheres 102.3
Dorsolateral tegmental area
nTPM: 109.2
2751 Female, age 85, both hemispheres 116.6
2360 Male, age 74, both hemispheres 111.4
2141 Male, age 76, both hemispheres 107.6
2654 Male, age 80, both hemispheres 106.9
2337 Male, age 61, both hemispheres 103.4
Gigantocellular reticular nuclei, medullary
nTPM: 107.3
2387 Female, age 91, both hemispheres 118.8
1876 Female, age 85, both hemispheres 116.1
2022 Male, age 76, right hemisphere 108.3
2314 Male, age 61, both hemispheres 107.9
2310 Male, age 80, both hemispheres 99.7
2462 Male, age 74, both hemispheres 92.6
Gigantocellular reticular nuclei, pars
nTPM: 102.6
2168 Male, age 76, both hemispheres 106.9
2706 Male, age 80, both hemispheres 105.6
2084 Female, age 85, both hemispheres 102.6
2330 Male, age 80, both hemispheres 100.0
2336 Male, age 61, both hemispheres 98.1
Inferior olive
nTPM: 115.2
2563 Male, age 74, both hemispheres 120.5
2085 Female, age 85, both hemispheres 119.9
2379 Male, age 80, both hemispheres 114.8
2178 Male, age 61, both hemispheres 113.7
2628 Female, age 91, both hemispheres 107.3
Kolliker-Fuse nucleus
nTPM: 111.9
2793 Female, age 91, left hemisphere 115.9
2315 Male, age 76, right hemisphere 112.2
2163 Male, age 80, both hemispheres 107.6
Lateral lemniscal nuclei
nTPM: 105.5
2320 Female, age 91, left hemisphere 109.0
2169 Male, age 76, both hemispheres 108.9
2746 Female, age 85, left hemisphere 108.5
2036 Male, age 80, both hemispheres 101.3
2453 Male, age 74, right hemisphere 99.7
Lateral medullary reticular nucleus
nTPM: 113.1
2305 Male, age 74, both hemispheres 118.6
2804 Female, age 91, both hemispheres 115.1
2374 Male, age 61, both hemispheres 114.0
2190 Female, age 85, both hemispheres 112.9
2852 Male, age 80, both hemispheres 110.9
2044 Male, age 76, both hemispheres 107.0
Lateral parabrachial nucleus
nTPM: 110.4
2792 Male, age 76, both hemispheres 124.5
2013 Male, age 80, both hemispheres 112.6
2139 Female, age 85, right hemisphere 104.1
2790 Male, age 61, both hemispheres 100.3
Lateral vestibular nucleus
nTPM: 108.1
2311 Male, age 80, both hemispheres 109.0
2184 Male, age 76, both hemispheres 107.2
Locus coeruleus
nTPM: 101.4
2788 Male, age 74, unknown 112.5
2014 Male, age 55, unknown 106.6
2720 Male, age 74, both hemispheres 103.7
2317 Female, age 72, unknown 100.0
2162 Male, age 80, both hemispheres 97.7
2123 Female, age 91, both hemispheres 95.2
1980 Male, age 76, both hemispheres 94.3
Medial olivary nucleus
nTPM: 116.0
1943 Male, age 61, both hemispheres 123.6
1962 Male, age 76, both hemispheres 118.5
2138 Female, age 91, both hemispheres 113.1
2851 Male, age 80, both hemispheres 108.7
Medial parabrachial nucleus
nTPM: 109.7
2463 Female, age 85, right hemisphere 114.3
2170 Female, age 91, both hemispheres 114.0
2854 Male, age 80, both hemispheres 110.4
2786 Male, age 76, both hemispheres 109.3
2156 Male, age 61, both hemispheres 100.6
Medial periolivary nuclei
nTPM: 109.2
2791 Male, age 74, right hemisphere 115.4
2458 Female, age 91, both hemispheres 110.2
2171 Female, age 85, both hemispheres 109.2
2081 Male, age 80, both hemispheres 106.4
2063 Male, age 76, both hemispheres 104.6
Medial vestibular nucleus
nTPM: 106.6
2801 Male, age 74, both hemispheres 114.3
2803 Female, age 91, both hemispheres 113.6
2093 Male, age 80, both hemispheres 108.6
2743 Female, age 85, both hemispheres 105.9
2134 Male, age 76, both hemispheres 99.2
2624 Male, age 61, both hemispheres 98.1
Motor facial nucleus
nTPM: 107.2
2697 Female, age 85, both hemispheres 112.0
2365 Male, age 74, right hemisphere 109.7
2795 Female, age 91, both hemispheres 109.3
2126 Male, age 61, both hemispheres 107.5
2062 Male, age 76, both hemispheres 106.3
2327 Male, age 80, both hemispheres 98.3
Motor hypoglossal nucleus
nTPM: 103.8
2125 Female, age 91, both hemispheres 111.2
2182 Male, age 80, both hemispheres 105.2
2277 Male, age 76, both hemispheres 102.0
2132 Female, age 85, both hemispheres 100.3
2461 Male, age 61, both hemispheres 100.2
Motor trigeminal nucleus
nTPM: 102.7
2309 Male, age 76, both hemispheres 109.8
2560 Male, age 74, both hemispheres 105.2
2321 Female, age 91, both hemispheres 102.3
2079 Male, age 80, both hemispheres 100.0
2335 Male, age 61, both hemispheres 96.1
Nuclei of the trapezoid body
nTPM: 103.4
2166 Male, age 80, both hemispheres 107.0
2735 Female, age 85, both hemispheres 105.2
2368 Female, age 91, both hemispheres 104.9
2159 Male, age 61, both hemispheres 100.8
1983 Male, age 76, both hemispheres 98.9
Nucleus ambiguus
nTPM: 100.5
2071 Male, age 76, both hemispheres 118.8
2096 Female, age 85, both hemispheres 82.2
Nucleus cuneatus
nTPM: 105.4
2381 Male, age 80, both hemispheres 111.9
2100 Male, age 76, both hemispheres 110.7
2380 Male, age 80, both hemispheres 108.7
2808 Female, age 85, both hemispheres 108.3
2805 Female, age 91, both hemispheres 107.4
2131 Male, age 76, both hemispheres 107.2
2564 Male, age 74, both hemispheres 105.5
2376 Male, age 61, both hemispheres 100.9
2562 Male, age 61, both hemispheres 87.8
Nucleus gracilis
nTPM: 110.2
2382 Male, age 80, both hemispheres 113.3
2627 Male, age 74, both hemispheres 111.4
2299 Female, age 85, both hemispheres 106.0
Nucleus raphe magnus
nTPM: 102.4
2459 Female, age 91, both hemispheres 109.5
2172 Female, age 85, both hemispheres 102.5
2455 Male, age 74, both hemispheres 102.3
2051 Male, age 76, both hemispheres 101.4
2328 Male, age 80, both hemispheres 99.7
2160 Male, age 61, both hemispheres 99.2
Nucleus raphe obscurus
nTPM: 115.3
2845 Female, age 85, midline 119.1
2142 Male, age 76, midline 117.5
2800 Male, age 61, midline 109.4
Nucleus raphe pallidus
nTPM: 111.0
2145 Male, age 76, midline 117.6
1924 Male, age 61, midline 110.3
2183 Male, age 80, midline 105.1
Nucleus tractus solitarii
nTPM: 103.8
2144 Female, age 91, right hemisphere 118.6
2191 Female, age 85, both hemispheres 107.0
2656 Male, age 76, both hemispheres 101.5
2307 Male, age 80, both hemispheres 88.2
Paramedian reticular nucleus
nTPM: 105.3
2052 Male, age 76, both hemispheres 111.0
2057 Male, age 80, both hemispheres 108.1
2050 Female, age 85, both hemispheres 105.9
2313 Male, age 61, both hemispheres 96.0
Parvicellular reticular nuclei
nTPM: 105.5
2119 Male, age 80, both hemispheres 111.8
2095 Male, age 76, both hemispheres 110.4
2558 Male, age 74, both hemispheres 94.3
Parvicellular reticular nuclei, medullary
nTPM: 100.9
2189 Female, age 91, both hemispheres 103.6
2181 Male, age 80, left hemisphere 102.9
2091 Female, age 85, both hemispheres 96.1
Pedunculopontine tegmental nucleus
nTPM: 107.6
1921 Female, age 85, both hemispheres 110.5
2334 Male, age 80, both hemispheres 106.6
2338 Male, age 61, both hemispheres 105.6
Peritrigeminal nucleus
nTPM: 102.8
2136 Male, age 76, both hemispheres 105.7
2179 Male, age 61, both hemispheres 105.5
2067 Female, age 85, both hemispheres 97.0
Pontine nuclei
nTPM: 107.8
2454 Male, age 74, left hemisphere 119.5
2319 Female, age 91, both hemispheres 113.3
1863 Male, age 55, unknown 112.6
2109 Female, age 72, unknown 109.7
1968 Male, age 76, left hemisphere 104.6
2727 Male, age 61, right hemisphere 104.1
2115 Male, age 80, left hemisphere 102.5
2787 Female, age 85, both hemispheres 96.1
Pontine raphe nucleus
nTPM: 105.1
2853 Male, age 76, midline 108.9
2122 Female, age 85, midline 101.3
Posteroventral cochlear nucleus
nTPM: 113.9
2341 Male, age 80, both hemispheres 125.7
2135 Female, age 91, both hemispheres 124.8
2070 Male, age 76, both hemispheres 109.0
2371 Male, age 61, both hemispheres 105.4
2752 Female, age 85, both hemispheres 104.7
Prepositus hypoglossal nucleus
nTPM: 107.4
2855 Female, age 85, right hemisphere 112.8
2086 Male, age 80, both hemispheres 102.0
Principal sensory trigeminal nucleus
nTPM: 106.1
2367 Female, age 91, left hemisphere 110.8
2324 Male, age 76, both hemispheres 106.8
2008 Male, age 80, left hemisphere 106.6
2158 Male, age 61, both hemispheres 100.2
Reticular pontine nucleus, caudal
nTPM: 106.7
2457 Female, age 91, both hemispheres 115.2
2559 Male, age 74, both hemispheres 111.4
2092 Male, age 76, both hemispheres 106.2
2332 Male, age 80, right hemisphere 94.2
Reticular pontine nucleus, oral
nTPM: 112.9
2167 Male, age 76, both hemispheres 114.6
2366 Female, age 91, both hemispheres 114.2
2012 Female, age 85, both hemispheres 112.9
1939 Male, age 80, both hemispheres 111.7
2361 Male, age 74, both hemispheres 110.9
Reticulotegmental nucleus
nTPM: 101.5
2322 Female, age 91, both hemispheres 103.7
2333 Male, age 80, both hemispheres 103.6
2452 Male, age 74, both hemispheres 101.7
2325 Male, age 76, both hemispheres 97.2
Spinal trigeminal nucleus, caudal
nTPM: 105.2
2642 Male, age 74, both hemispheres 110.4
2447 Male, age 76, both hemispheres 106.1
2312 Male, age 61, both hemispheres 104.7
2390 Female, age 91, both hemispheres 103.5
2308 Male, age 80, both hemispheres 101.2
Spinal trigeminal nucleus, interpolar
nTPM: 104.0
2386 Female, age 85, both hemispheres 109.9
2389 Female, age 91, both hemispheres 108.6
2033 Male, age 80, both hemispheres 104.9
2625 Male, age 61, both hemispheres 102.3
2066 Male, age 76, right hemisphere 94.1
Spinal trigeminal nucleus, oral
nTPM: 103.7
1978 Male, age 76, both hemispheres 105.3
2737 Female, age 85, both hemispheres 104.6
2164 Male, age 80, both hemispheres 101.3
Spinal vestibular nucleus
nTPM: 107.4
2384 Male, age 74, both hemispheres 113.4
2806 Female, age 85, both hemispheres 111.4
2186 Female, age 91, both hemispheres 109.5
2748 Male, age 76, both hemispheres 104.9
2780 Male, age 80, both hemispheres 103.7
2796 Male, age 61, both hemispheres 101.7
Subcoeruleus area
nTPM: 108.4
2369 Female, age 85, left hemisphere 124.7
2089 Male, age 76, left hemisphere 109.4
1958 Male, age 80, both hemispheres 104.7
2451 Male, age 74, both hemispheres 104.7
2323 Female, age 91, left hemisphere 98.5
Superior olive
nTPM: 107.6
1875 Female, age 85, both hemispheres 113.8
2020 Male, age 76, both hemispheres 113.7
2364 Male, age 74, right hemisphere 108.9
2329 Male, age 80, right hemisphere 103.3
2561 Female, age 91, both hemispheres 98.3
Superior vestibular nucleus
nTPM: 113.3
2383 Male, age 74, both hemispheres 128.0
2015 Male, age 80, both hemispheres 106.2
2061 Male, age 76, both hemispheres 105.8
Ventral medullary reticular nucleus
nTPM: 106.2
2372 Male, age 61, both hemispheres 111.4
2060 Male, age 76, both hemispheres 101.0
Ventral periolivary nuclei
nTPM: 104.7
2023 Male, age 76, both hemispheres 114.1
2130 Female, age 85, both hemispheres 103.0
2165 Male, age 80, both hemispheres 101.0
2794 Female, age 91, left hemisphere 100.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 107.2
2118 Male, age 80, both hemispheres 114.4
2180 Male, age 61, both hemispheres 109.7
1986 Male, age 76, both hemispheres 108.0
2302 Female, age 91, both hemispheres 102.8
2741 Female, age 85, both hemispheres 101.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 106.8
2840 Female, age 85, both hemispheres 114.1
2456 Female, age 91, both hemispheres 109.5
1959 Male, age 76, both hemispheres 107.7
2359 Male, age 61, both hemispheres 106.1
2161 Male, age 80, both hemispheres 102.1
2449 Male, age 74, both hemispheres 101.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 92.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 92.4
FF:10165-103B3 76 years, female 99.4
FF:10182-103D2 60 years, female 85.3
Medulla oblongata
Scaled Tags Per Million: 86.1
FF:10155-103A2 76 years, female 106.2
FF:10038-101F2 18-64 years, mixed 76.8
FF:10174-103C3 60 years, female 75.4
Pons
Scaled Tags Per Million: 81.7
FF:10033-101E6 18-54 years, mixed 81.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 103.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 103.5
Samples: 4

Max nTPM: 112.6
Min nTPM: 91.5
Sample A Female 112.6
Sample B Female 91.5
Sample C Male 97.4
Sample D Male 112.4
Pons
nTPM: 99.9
Samples: 4

Max nTPM: 123.7
Min nTPM: 85.6
Sample A Female 123.7
Sample B Female 85.6
Sample C Male 92.6
Sample D Male 97.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 54.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 54.0
Samples: 4

Max nTPM: 55.9
Min nTPM: 50.6
Sample A Male 53.8
Sample B Male 55.7
Sample C Female 50.6
Sample D Female 55.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.4
2277 Antisense, RP_Baylor_102834, Mouse strain C57BL/6J (56 days, male) 3.4
2278 Antisense, RP_Baylor_102834, Mouse strain C57BL/6J (56 days, male) 3.4
Pons
Expression energy: 3.5
2278 Antisense, RP_Baylor_102834, Mouse strain C57BL/6J (56 days, male) 3.5
2277 Antisense, RP_Baylor_102834, Mouse strain C57BL/6J (56 days, male) 2.5

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