HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:28.2 nTPM
HPA Brain:116.3 nTPM
GTEx:28.2 nTPM
FANTOM5:83.3 Scaled Tags Per Million
Pig:105.5 nTPM
Mouse:75.0 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026638Antibody CAB004595
Glial cells MediumHigh
Neuronal cells Medium-





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 116.3
Sample id Sample description nTPM
Hippocampus
nTPM: 111.7
1911 Female, age 85, right hemisphere 116.8
2148 Female, age 91, left hemisphere 111.5
1898 Male, age 80, left hemisphere 111.2
1855 Male, age 76, left hemisphere 111.1
2621 Female, age 67, right hemisphere 109.9
2529 Female, age 94, left hemisphere 109.8
Dentate gyrus
nTPM: 109.1
1927 Female, age 91, both hemispheres 117.8
2246 Female, age 85, both hemispheres 113.6
2528 Male, age 74, both hemispheres 110.2
2531 Female, age 67, both hemispheres 107.9
2010 Male, age 76, both hemispheres 107.4
2530 Female, age 94, left hemisphere 97.8
Entorhinal gyrus
nTPM: 107.0
2117 Female, age 91, right hemisphere 112.2
1938 Female, age 85, left hemisphere 110.5
2764 Male, age 80, right hemisphere 107.8
2686 Male, age 75, right hemisphere 106.2
1787 Male, age 76, left hemisphere 104.2
2613 Female, age 94, left hemisphere 101.0
Hippocampus, CA1
nTPM: 116.3
2749 Male, age 80, left hemisphere 132.9
1873 Female, age 85, both hemispheres 121.9
2045 Male, age 76, both hemispheres 110.8
2527 Male, age 74, both hemispheres 108.1
2082 Female, age 91, right hemisphere 107.9
Hippocampus, CA2
nTPM: 110.2
1892 Male, age 76, both hemispheres 119.1
1963 Male, age 80, left hemisphere 116.8
2113 Female, age 91, right hemisphere 112.6
2249 Male, age 74, both hemispheres 108.6
1940 Female, age 85, left hemisphere 105.4
2437 Female, age 94, left hemisphere 98.5
Hippocampus, CA3
nTPM: 114.8
2137 Male, age 80, left hemisphere 127.3
2436 Male, age 74, both hemispheres 121.3
1891 Female, age 85, both hemispheres 113.7
1867 Male, age 76, both hemispheres 113.6
2620 Female, age 94, left hemisphere 111.3
2861 Female, age 67, both hemispheres 101.6
Parahippocampal cortex
nTPM: 107.3
2693 Female, age 94, both hemispheres 116.4
1933 Female, age 85, both hemispheres 115.2
1850 Male, age 80, both hemispheres 111.0
2250 Female, age 67, right hemisphere 109.0
1990 Female, age 91, right hemisphere 108.5
2692 Male, age 74, both hemispheres 105.3
2018 Male, age 76, both hemispheres 105.2
2245 Female, age 91, both hemispheres 102.6
2532 Female, age 72, left hemisphere 100.8
2622 Female, age 67, right hemisphere 99.3
Perirhinal gyrus
nTPM: 110.2
1847 Female, age 91, left hemisphere 114.0
1841 Female, age 85, right hemisphere 111.7
1794 Male, age 80, right hemisphere 109.7
2521 Female, age 94, right hemisphere 109.2
2848 Male, age 76, right hemisphere 106.2
Subiculum
nTPM: 110.8
2729 Female, age 91, right hemisphere 116.1
1977 Female, age 85, both hemispheres 114.5
1901 Male, age 80, both hemispheres 113.9
2619 Male, age 74, both hemispheres 111.0
2438 Female, age 94, left hemisphere 104.9
2042 Male, age 76, both hemispheres 104.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 28.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.2
Samples: 197

Max nTPM: 51.5
Min nTPM: 9.4
Std nTPM: 7.9
Median nTPM: 27.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 51.5
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 49.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 47.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 46.0
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 45.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 43.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 42.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 41.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 40.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 40.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 40.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 83.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.3
FF:10153-102I9 76 years, female 102.3
FF:10169-103B7 60 years, female 64.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 105.5
Pig sample Sample description nTPM
Subiculum
nTPM: 96.6
Samples: 4

Max nTPM: 110.8
Min nTPM: 89.4
Sample A Female 110.8
Sample B Female 94.6
Sample C Male 89.4
Sample D Male 91.4
Dorsal hippocampus
nTPM: 105.6
Samples: 4

Max nTPM: 115.6
Min nTPM: 99.7
Sample A Female 115.6
Sample B Female 101.3
Sample C Male 105.6
Sample D Male 99.7
Entorhinal cortex
nTPM: 99.3
Samples: 4

Max nTPM: 105.4
Min nTPM: 88.9
Sample A Female 104.6
Sample B Female 105.4
Sample C Male 98.3
Sample D Male 88.9
Ventral hippocampus
nTPM: 97.1
Samples: 4

Max nTPM: 106.8
Min nTPM: 90.3
Sample A Female 95.1
Sample B Female 90.3
Sample C Male 96.1
Sample D Male 106.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 75.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.1
Samples: 4

Max nTPM: 77.4
Min nTPM: 68.4
Sample A Male 69.9
Sample B Male 68.4
Sample C Female 72.6
Sample D Female 77.4
Hippocampal formation
nTPM: 75.0
Samples: 4

Max nTPM: 79.8
Min nTPM: 65.9
Sample A Male 65.9
Sample B Male 79.8
Sample C Female 76.9
Sample D Female 77.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
2277 Antisense, RP_Baylor_102834, Mouse strain C57BL/6J (56 days, male) 6.8
2278 Antisense, RP_Baylor_102834, Mouse strain C57BL/6J (56 days, male) 6.8

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