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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNPY2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
166.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
154.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
139.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
120.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
114.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
110.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
108.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
102.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
100.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
96.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
92.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
90.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
81.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
80.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
69.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
67.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
58.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
56.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
55.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
53.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
41.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
41.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
41.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
40.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
40.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
38.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
36.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
32.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
32.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
28.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
28.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
28.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
27.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
27.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
27.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
26.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
26.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
26.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
26.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
26.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
25.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
24.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
24.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
23.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
23.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
23.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
22.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
22.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
22.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
21.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
20.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
19.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
18.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
17.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
16.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
15.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
13.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
13.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNPY2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
114.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
110.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
89.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
79.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
79.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
75.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
75.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
72.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
71.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
63.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
63.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
63.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
63.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
63.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
62.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
62.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
61.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
61.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
61.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
60.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
60.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
59.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
59.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
59.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
58.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
58.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
58.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
58.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
57.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
57.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
57.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
57.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
56.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
56.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
56.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
55.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
55.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
55.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
55.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
55.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
55.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
54.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
54.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
54.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
54.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
54.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
54.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
54.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
54.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
54.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
53.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
53.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
53.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
53.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
53.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
53.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
53.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
53.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
52.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
52.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
52.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
52.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
52.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
52.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
51.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
51.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
51.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
51.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
51.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
51.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
51.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
51.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
51.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
51.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
51.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
50.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
50.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
50.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
50.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
50.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
50.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
50.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
50.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
50.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
50.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
50.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
49.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
49.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
49.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
49.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
49.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
49.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
49.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
49.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
49.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
49.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
48.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
48.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
48.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
48.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
48.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
48.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
48.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
48.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
48.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
48.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
48.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
48.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
48.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
48.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
48.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
47.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
47.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
47.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
47.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
47.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
47.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
47.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
47.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
46.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
46.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
46.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
46.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
46.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
46.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
46.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
46.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
46.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
46.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
46.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
46.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
46.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
46.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
46.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
46.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
46.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
46.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
45.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
45.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
45.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
45.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
45.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
45.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
45.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
44.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
44.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
44.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
44.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
44.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
44.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
44.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
44.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
44.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
44.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
44.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
44.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
44.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
44.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
44.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
44.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
44.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
43.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
43.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
43.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
43.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
43.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
43.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
43.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
43.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
43.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
43.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
43.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
43.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
43.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
43.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
43.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
42.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
42.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
42.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
42.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
42.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
42.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
42.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
42.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
42.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
42.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
42.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
42.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
42.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
42.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
42.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
42.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
42.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
42.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
42.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
42.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
42.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
42.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
42.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
42.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
42.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
42.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
42.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
42.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
42.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
42.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
42.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
42.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
42.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
41.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
41.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
41.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
41.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
41.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
41.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
41.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
41.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
41.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
41.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
41.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
41.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
41.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
41.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
41.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
40.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
40.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
40.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
40.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
40.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
40.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
40.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
40.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
40.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
40.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
40.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
40.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
40.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
40.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
40.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
40.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
40.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
40.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
40.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
40.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
40.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
40.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
40.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
40.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
40.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
39.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
39.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
39.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
39.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
39.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
39.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
39.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
39.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
39.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
39.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
39.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
39.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
39.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
39.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
39.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
39.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
39.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
39.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
39.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
39.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
39.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
39.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
38.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
38.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
38.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
38.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
38.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
38.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
38.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
38.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
38.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
38.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
38.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
38.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
38.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
38.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
38.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
37.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
37.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
37.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
37.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
37.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
37.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
37.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
37.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
37.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
37.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
37.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
37.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
37.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
37.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
37.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
37.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
37.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
37.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
37.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
37.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
37.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
36.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
36.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
36.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
36.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
36.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
36.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
36.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
36.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
36.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
36.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
36.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
35.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
35.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
35.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
35.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
35.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
35.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
35.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
35.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
34.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
34.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
34.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
34.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
34.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
34.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
34.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
34.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
34.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
34.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
34.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
34.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
34.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
34.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
34.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
34.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
34.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
33.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
33.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
33.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
33.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
33.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
33.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
33.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
33.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
33.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
33.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
33.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
33.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
32.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
32.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
32.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
32.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
32.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
32.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
32.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
32.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
32.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
32.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
32.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
32.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
32.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
32.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
32.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
31.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
31.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
31.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
31.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
31.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
31.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
31.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
31.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
31.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
31.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
31.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
30.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
30.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
30.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
30.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
30.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
30.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
30.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
29.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
29.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
29.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
29.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
29.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
29.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
29.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
29.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
29.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
29.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
29.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
29.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
28.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
28.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
28.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
28.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
28.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
28.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
28.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
28.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
28.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
28.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
28.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
28.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
28.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
28.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
28.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
28.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
28.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
27.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
27.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
27.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
27.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
27.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
27.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
27.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
27.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
26.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
26.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
26.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
26.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
26.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
26.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
26.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
26.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
26.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
26.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
26.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
26.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
25.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
25.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
25.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
25.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
25.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
25.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
25.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
25.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
25.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
25.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
24.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
23.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
23.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
23.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
23.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
23.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
23.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
23.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
22.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
22.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
22.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
21.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
21.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
21.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
21.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
20.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
20.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
20.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
20.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
20.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
20.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
20.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
20.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
20.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
19.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
19.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
19.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
18.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
18.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
18.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
18.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
17.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
17.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
16.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
16.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
16.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
16.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
15.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
13.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
9.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNPY2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
133.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
79.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
73.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
71.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
70.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
67.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
67.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
66.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
65.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
63.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
62.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
61.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
59.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
58.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
56.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
55.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
55.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
54.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
54.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
52.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
52.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
51.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
51.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
50.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
49.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
49.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
49.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
48.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
48.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
48.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
48.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
48.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
48.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
47.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
47.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
47.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
47.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
46.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
46.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
46.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
46.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
46.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
45.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
45.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
45.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
44.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
44.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
44.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
44.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
43.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
43.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
42.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
42.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
42.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
42.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
42.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
42.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
41.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
40.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
40.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
39.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
38.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
38.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
37.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
37.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
36.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
36.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
36.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
36.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
36.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
36.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
36.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
36.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
35.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
35.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
35.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
34.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
33.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
33.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
33.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
33.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
33.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
33.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
31.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
31.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
31.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
30.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
28.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
28.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
27.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
27.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
24.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
22.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNPY2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
234.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
212.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
194.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
177.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
176.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
170.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
169.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
156.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
152.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
151.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
136.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
123.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
122.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
120.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
114.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
113.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
112.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
111.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
111.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
110.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
110.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
110.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
109.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
107.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
106.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
106.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
103.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
102.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
101.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
101.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
99.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
98.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
98.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
98.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
97.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
86.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
84.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
82.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
80.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
80.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
77.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
77.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
75.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
75.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
74.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
73.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
73.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
72.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
72.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
71.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
70.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
68.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
67.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
67.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
66.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
65.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
63.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
63.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
63.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
62.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
61.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
61.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
60.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
60.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
60.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
60.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
59.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
59.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
59.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
58.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
58.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
57.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
56.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
56.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
56.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
56.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
56.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
56.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
55.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
55.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
54.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
54.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
54.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
54.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
54.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
53.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
53.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
53.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
52.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
52.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
52.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
52.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
52.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
51.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
51.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
51.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
51.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
51.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
50.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
50.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
50.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
50.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
50.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
49.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
49.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
49.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
49.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
48.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
48.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
48.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
48.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
48.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
47.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
47.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
47.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
47.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
47.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
47.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
46.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
46.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
46.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
46.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
46.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
46.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
45.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
45.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
45.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
45.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
44.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
44.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
43.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
42.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
42.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
42.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
42.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
42.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
41.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
41.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
41.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
41.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
41.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
41.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
41.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
40.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
40.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
40.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
40.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
40.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
40.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
40.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
40.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
39.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
39.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
39.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
39.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
39.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
38.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
38.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
38.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
38.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
38.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
38.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
37.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
37.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
37.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
36.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
36.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
36.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
36.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
36.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
36.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
35.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
35.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
35.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
35.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
35.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
34.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
34.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
34.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
34.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
33.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
33.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
33.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
33.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
33.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
33.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
33.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
33.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
33.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
33.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
33.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
32.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
32.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
32.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
32.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
32.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
32.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
32.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
32.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
32.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
32.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
31.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
31.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
31.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
31.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
31.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
31.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
31.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
30.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
30.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
30.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
30.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
30.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
30.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
30.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
30.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
30.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
30.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
30.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
30.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
30.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
30.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
29.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
29.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
29.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
29.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
29.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
29.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
28.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
27.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
26.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
26.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
25.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
25.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
25.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
25.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
24.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
24.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
24.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
24.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
24.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
24.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
24.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
24.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
24.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
24.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
22.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
22.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
21.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
20.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
20.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
20.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
19.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
19.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
19.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
18.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
18.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
17.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
16.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
11.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
8.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025110003
Tumor
1.4
CPT0002350011
Tumor
1.4
CPT0012180003
Tumor
1.3
CPT0012550003
Tumor
1.0
CPT0079270003
Tumor
0.9
CPT0001340003
Tumor
0.9
CPT0086950003
Tumor
0.8
CPT0023350003
Tumor
0.8
CPT0088550004
Tumor
0.8
CPT0086820003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0084560003
Tumor
0.6
CPT0079410003
Tumor
0.6
CPT0010160003
Tumor
0.5
CPT0011410003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0078830003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0012770003
Normal
0.3
CPT0012900004
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0024670003
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0001260009
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0014350001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0006530001
Normal
0.2
CPT0088900003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0078840001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0012290003
Normal
0.1
CPT0023710001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0009020003
Normal
0.1
CPT0010120001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0088920001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0086830003
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0077320001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0066480003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0065930003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0065810003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0025170003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0002270011
Tumor
-0.3
CPT0088480003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0020120003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0025230003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0078930003
Tumor
-0.5
CPT0014160003
Tumor
-0.5
CPT0078660003
Tumor
-0.5
CPT0019990003
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0065750003
Tumor
-0.6
CPT0006630003
Tumor
-0.7
CPT0079180003
Tumor
-0.7
CPT0088970003
Tumor
-0.8
CPT0021240003
Tumor
-0.9
CPT0086030003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
