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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HMBS is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
46.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
34.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
32.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
29.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
28.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
27.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
25.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
25.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
25.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
25.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
24.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
24.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
24.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
24.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
22.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
22.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
22.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
21.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
20.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
20.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
19.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
19.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
19.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
18.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
18.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
18.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
17.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
16.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
16.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
16.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
15.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
15.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
15.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
15.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
14.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
13.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
13.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
13.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
13.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
13.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
11.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
10.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
4.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HMBS is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
35.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
33.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
32.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
30.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
29.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
26.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
26.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
25.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
24.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
24.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
23.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
22.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
21.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
21.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
19.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
19.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
19.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
19.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
18.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
18.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
18.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
18.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
18.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
18.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
18.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
17.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
16.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
15.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
15.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
15.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
15.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
15.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
14.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
14.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
14.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
14.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
14.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
14.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
13.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
13.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
13.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
13.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
13.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
12.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
12.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
12.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
12.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
12.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
12.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
11.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
11.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
11.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
11.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
11.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
11.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
11.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
11.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
10.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
10.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
10.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
10.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
10.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
10.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
10.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
10.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
10.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
10.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
10.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
10.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
10.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
9.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
9.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
9.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
9.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
9.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
9.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
9.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
9.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
9.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
9.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
9.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
9.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
9.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
9.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
9.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
9.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
9.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
9.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
9.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
9.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
9.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
9.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
9.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
8.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
8.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
8.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
8.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
8.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
8.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
8.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
8.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
8.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
8.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
8.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
8.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
8.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
8.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
8.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
8.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
8.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
8.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
8.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
8.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
8.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
8.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
8.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
8.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
8.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
8.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
8.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
8.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
8.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
8.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
8.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
8.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
8.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
7.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
7.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
7.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
7.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
7.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
7.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
7.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
7.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
7.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
7.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
7.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
7.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
7.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
7.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
7.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
7.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
7.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
7.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
7.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
7.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
7.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
7.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
7.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
7.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
7.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
7.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
7.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
7.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
7.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
7.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
7.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
7.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
7.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
7.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
6.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
6.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
6.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
6.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
6.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
6.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
6.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
6.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
6.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
6.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
6.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
6.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
6.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
6.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
6.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
6.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
6.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
6.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
6.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
6.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
6.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
6.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
6.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
6.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
6.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
6.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
6.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
6.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
6.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
6.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
6.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
6.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
6.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
6.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
6.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
6.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
6.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
6.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
6.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
6.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
6.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
6.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
6.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
6.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
6.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
6.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
6.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
6.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
6.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
6.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
6.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
6.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
6.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
6.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
6.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
5.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
5.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
5.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
5.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
5.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
5.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
5.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
5.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
5.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
5.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
5.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
5.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
5.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
5.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
5.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
5.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
5.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
5.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
5.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
5.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
5.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
5.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
5.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
5.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
5.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
5.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
5.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
5.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
5.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
5.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
5.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
5.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
5.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
5.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
5.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
5.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
5.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
5.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
5.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
5.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
4.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
4.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
4.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
4.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
4.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
4.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
4.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
4.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
4.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
4.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
4.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
4.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
4.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
4.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
4.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
4.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
4.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
4.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
4.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
4.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
4.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
4.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
4.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
4.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
4.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
4.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
3.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
3.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
3.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
3.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
3.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
3.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
3.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
3.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
3.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
3.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
3.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
3.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
3.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HMBS is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
15.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
14.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
12.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
12.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
12.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
12.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
12.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
11.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
11.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
11.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
10.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
10.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
10.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
9.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
9.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
9.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
9.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
9.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
8.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
8.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
8.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
8.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
8.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
8.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
8.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
8.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
7.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
7.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
7.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
7.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
7.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
7.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
7.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
7.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
7.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
6.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
6.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
6.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
6.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
6.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
6.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
6.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
6.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
6.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
6.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
6.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
6.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
6.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
5.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
5.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
5.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
5.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
5.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
5.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
5.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
5.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
5.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
5.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
5.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
5.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
5.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
5.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
5.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
5.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
4.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
4.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
4.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
4.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
4.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
4.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
4.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
4.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
4.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
4.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
3.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
3.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
3.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
3.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
3.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
3.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
2.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HMBS is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
49.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
44.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
40.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
39.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
38.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
35.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
34.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
32.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
31.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
31.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
30.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
30.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
30.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
29.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
29.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
29.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
29.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
29.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
28.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
27.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
27.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
26.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
26.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
26.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
25.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
25.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
25.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
25.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
24.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
24.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
24.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
24.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
23.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
23.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
23.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
23.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
23.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
23.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
22.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
22.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
22.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
22.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
22.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
22.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
22.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
22.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
22.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
22.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
22.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
22.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
22.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
21.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
21.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
21.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
21.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
21.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
21.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
21.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
21.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
21.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
21.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
20.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
20.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
20.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
20.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
20.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
20.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
20.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
20.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
19.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
19.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
19.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
19.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
19.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
19.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
19.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
19.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
19.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
19.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
19.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
19.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
19.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
18.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
18.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
18.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
18.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
18.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
18.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
18.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
18.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
18.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
18.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
18.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
17.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
17.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
17.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
17.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
17.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
17.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
17.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
17.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
17.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
17.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
17.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
17.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
17.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
17.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
16.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
16.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
16.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
16.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
15.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
15.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
15.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
15.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
15.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
14.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
14.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
14.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
14.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
14.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
14.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
14.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
14.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
14.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
14.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
13.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
13.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
13.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
13.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
13.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
13.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
12.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
12.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
12.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
11.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
11.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
11.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
11.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
10.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
10.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
10.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
9.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
7.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
6.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
6.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
6.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
6.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
5.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
1.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078510003
Tumor
2.0
CPT0092290003
Tumor
1.4
CPT0065750003
Tumor
1.4
CPT0025290003
Tumor
1.3
CPT0066470004
Tumor
1.3
CPT0007860003
Tumor
1.3
CPT0064370003
Tumor
1.1
CPT0092790003
Tumor
1.0
CPT0086030003
Tumor
0.9
CPT0078930003
Tumor
0.9
CPT0021240003
Tumor
0.9
CPT0089460004
Tumor
0.8
CPT0025170003
Tumor
0.8
CPT0015730003
Tumor
0.8
CPT0001500009
Tumor
0.8
CPT0012900004
Tumor
0.7
CPT0081880003
Tumor
0.7
CPT0023690003
Tumor
0.7
CPT0063320003
Tumor
0.7
CPT0020120003
Tumor
0.7
CPT0019990003
Tumor
0.7
CPT0014160003
Tumor
0.7
CPT0075560003
Tumor
0.6
CPT0078660003
Tumor
0.6
CPT0065690003
Tumor
0.6
CPT0006630003
Tumor
0.6
CPT0015910003
Tumor
0.6
CPT0012550003
Tumor
0.6
CPT0077310003
Tumor
0.5
CPT0011410003
Tumor
0.5
CPT0065810003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0065930003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0000780007
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0069160003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0088900003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0019130003
Tumor
0.2
CPT0019160001
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0086360003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0079510001
Normal
0.0
CPT0001340003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0079180003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0078530001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0063330001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0026410003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0066520001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0078840001
Normal
-0.3
CPT0006440003
Tumor
-0.3
CPT0006530001
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0086820003
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0011240003
Tumor
-0.3
CPT0065450001
Normal
-0.3
CPT0088970003
Tumor
-0.3
CPT0012090003
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0071150004
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0000640003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0085670003
Tumor
-0.4
CPT0000890001
Normal
-0.4
CPT0001540009
Tumor
-0.4
CPT0010110003
Tumor
-0.4
CPT0014130001
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0075170001
Normal
-0.4
CPT0079230003
Tumor
-0.4
CPT0079480003
Tumor
-0.4
CPT0025350003
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0017850003
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0001190001
Normal
-0.4
CPT0084560003
Tumor
-0.4
CPT0076330003
Tumor
-0.4
CPT0088550004
Tumor
-0.4
CPT0081600003
Tumor
-0.5
CPT0088480003
Tumor
-0.5
CPT0014370004
Tumor
-0.5
CPT0075720003
Tumor
-0.5
CPT0086870003
Tumor
-0.5
CPT0079270003
Tumor
-0.6
CPT0025110003
Tumor
-0.7
CPT0023350003
Tumor
-0.7
CPT0075130003
Tumor
-0.7
CPT0065430003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
