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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRKDC is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
47.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
41.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
40.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
31.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
28.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
24.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
22.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
19.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
19.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
17.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
16.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
15.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
15.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
14.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
13.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
11.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
10.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
10.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
8.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
7.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
5.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
5.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
4.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
3.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRKDC is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
84.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
73.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
38.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
35.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
33.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
32.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
32.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
28.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
28.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
27.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
24.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
23.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
22.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
22.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
22.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
22.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
21.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
21.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
21.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
20.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
20.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
20.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
20.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
20.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
19.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
19.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
19.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
19.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
19.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
19.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
19.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
19.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
18.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
18.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
18.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
18.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
18.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
17.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
17.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
17.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
17.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
16.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
16.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
16.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
16.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
16.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
16.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
16.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
16.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
16.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
16.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
15.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
15.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
15.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
15.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
15.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
15.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
15.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
15.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
15.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
15.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
15.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
15.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
14.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
14.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
14.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
14.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
14.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
14.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
14.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
14.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
14.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
14.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
14.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
14.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
14.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
14.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
13.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
13.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
13.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
13.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
13.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
13.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
13.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
13.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
13.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
13.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
13.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
13.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
13.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
13.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
13.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
13.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
13.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
12.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
12.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
12.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
12.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
12.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
12.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
12.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
12.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
12.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
12.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
11.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
11.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
11.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
11.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
11.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
11.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
11.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
11.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
11.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
11.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
11.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
11.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
11.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
11.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
11.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
11.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
11.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
11.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
11.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
11.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
11.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
11.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
11.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
10.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
10.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
10.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
10.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
10.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
10.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
10.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
10.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
10.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
10.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
10.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
10.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
10.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
10.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
9.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
9.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
9.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
9.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
9.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
9.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
9.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
9.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
9.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
8.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
8.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
8.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
8.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
8.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
8.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
8.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
8.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
8.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
8.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
8.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
8.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
8.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
8.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
8.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
8.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
7.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
7.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
7.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
7.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
7.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
7.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
7.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
7.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
7.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
6.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
6.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
6.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
6.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
6.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
6.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
6.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
6.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
6.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
6.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
5.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
5.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
5.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
5.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
5.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
5.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
5.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
5.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
5.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
4.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
4.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
4.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
4.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
4.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
4.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
4.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
3.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
3.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
3.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
3.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
3.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
3.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
3.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
3.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
3.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
3.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
3.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
3.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
2.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
2.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
2.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
2.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
2.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
1.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
1.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRKDC is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
42.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
23.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
18.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
17.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
17.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
16.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
16.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
16.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
16.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
16.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
15.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
15.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
15.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
15.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
15.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
15.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
14.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
14.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
14.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
14.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
13.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
13.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
13.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
13.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
12.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
12.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
12.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
12.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
11.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
11.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
11.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
11.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
11.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
11.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
11.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
11.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
10.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
10.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
10.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
10.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
10.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
10.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
10.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
9.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
9.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
9.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
9.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
9.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
9.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
9.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
9.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
8.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
8.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
8.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
7.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
7.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
6.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
6.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
6.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
6.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
6.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRKDC is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
69.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
61.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
57.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
50.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
50.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
47.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
44.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
38.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
38.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
37.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
35.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
34.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
32.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
31.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
31.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
30.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
30.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
28.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
27.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
26.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
26.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
26.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
25.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
24.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
24.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
24.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
24.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
24.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
24.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
23.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
22.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
21.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
21.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
21.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
20.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
20.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
20.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
20.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
19.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
19.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
19.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
19.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
19.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
19.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
19.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
19.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
19.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
18.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
18.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
18.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
18.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
17.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
17.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
17.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
17.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
17.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
16.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
16.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
16.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
16.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
16.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
16.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
15.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
15.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
15.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
15.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
15.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
15.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
15.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
15.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
14.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
14.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
13.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
13.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
13.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
13.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
13.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
12.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
12.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
12.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
12.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
12.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
12.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
11.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
11.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
11.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
11.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
11.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
11.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
11.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
10.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
10.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
10.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
10.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
9.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
9.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
9.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
9.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
9.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
9.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
9.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
9.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
9.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
9.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
9.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
9.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
9.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
8.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
8.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
8.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
8.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
7.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
7.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
7.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
7.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
7.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
7.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
7.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
7.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
6.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
6.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
6.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
6.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
6.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
6.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
6.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
5.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
5.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
4.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
4.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
3.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
2.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.9
CPT0001180009
Tumor
0.8
CPT0017850003
Tumor
0.7
CPT0012180003
Tumor
0.6
CPT0014450004
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0077320001
Normal
0.4
CPT0075130003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0088970003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0001260009
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0025230003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0023350003
Tumor
0.3
CPT0001230001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0001270001
Normal
0.2
CPT0012670003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0088630003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0086870003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0001540009
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0079180003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0088500001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0025350003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0064400001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0012920003
Normal
0.0
CPT0009080003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0078670001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0065450001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0081880003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0000780007
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0015730003
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0076330003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0011240003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0066480003
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0065930003
Tumor
-0.3
CPT0012900004
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0063320003
Tumor
-0.4
CPT0017410003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
