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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENOP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
357.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
6006.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
1035.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
918.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
752.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
696.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
579.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
569.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
551.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
538.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
536.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
517.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
508.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
492.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
481.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
406.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
394.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
370.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
345.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
344.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
342.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
338.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
329.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
308.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
264.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
243.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
237.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
233.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
226.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
222.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
211.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
208.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
206.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
197.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
182.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
179.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
171.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
164.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
160.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
159.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
145.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
142.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
142.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
131.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
131.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
128.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
126.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
125.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
120.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
114.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
105.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
102.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
92.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
87.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
73.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
66.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
65.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
50.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
47.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
45.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
44.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
42.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
39.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
36.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENOP is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
356.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1319.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
981.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
979.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
968.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
950.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
944.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
939.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
919.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
910.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
881.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
879.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
879.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
869.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
860.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
859.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
847.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
843.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
842.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
830.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
829.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
828.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
827.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
825.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
822.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
805.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
792.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
777.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
775.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
767.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
766.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
754.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
754.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
743.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
729.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
727.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
717.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
713.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
701.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
687.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
682.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
681.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
675.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
674.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
671.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
662.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
661.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
657.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
649.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
636.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
634.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
630.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
629.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
629.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
629.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
626.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
622.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
619.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
615.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
614.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
610.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
606.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
605.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
605.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
603.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
602.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
601.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
599.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
596.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
594.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
589.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
583.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
582.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
582.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
581.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
580.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
579.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
578.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
576.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
575.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
571.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
569.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
567.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
565.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
564.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
562.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
561.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
558.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
558.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
555.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
549.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
548.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
548.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
541.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
540.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
539.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
539.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
538.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
536.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
535.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
532.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
532.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
531.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
530.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
529.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
527.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
526.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
526.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
518.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
517.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
517.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
514.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
514.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
513.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
511.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
510.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
507.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
506.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
503.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
503.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
502.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
502.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
499.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
497.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
497.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
494.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
494.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
493.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
493.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
489.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
486.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
485.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
484.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
483.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
482.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
480.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
479.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
478.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
478.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
476.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
474.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
471.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
471.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
468.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
468.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
467.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
467.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
462.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
461.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
461.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
459.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
458.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
456.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
455.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
455.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
451.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
450.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
447.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
446.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
445.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
444.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
444.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
442.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
441.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
440.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
436.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
436.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
432.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
430.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
430.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
429.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
426.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
424.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
422.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
422.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
421.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
421.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
420.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
417.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
416.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
415.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
414.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
414.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
414.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
411.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
411.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
410.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
409.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
408.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
408.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
408.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
408.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
407.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
406.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
406.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
405.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
404.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
403.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
403.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
403.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
402.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
400.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
400.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
398.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
396.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
395.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
394.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
394.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
393.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
391.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
391.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
391.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
390.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
390.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
388.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
387.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
386.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
386.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
385.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
382.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
380.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
380.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
380.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
376.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
375.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
373.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
371.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
370.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
369.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
368.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
368.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
368.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
367.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
365.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
364.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
362.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
361.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
360.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
360.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
359.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
359.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
357.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
357.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
351.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
350.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
350.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
348.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
345.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
345.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
344.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
343.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
340.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
340.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
336.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
336.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
335.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
335.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
335.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
334.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
329.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
329.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
328.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
326.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
324.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
324.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
323.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
323.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
323.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
322.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
321.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
320.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
319.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
318.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
317.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
316.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
316.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
316.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
314.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
313.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
311.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
310.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
310.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
309.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
308.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
307.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
302.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
302.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
302.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
300.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
299.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
298.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
296.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
296.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
294.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
292.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
292.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
292.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
292.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
291.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
291.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
291.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
285.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
283.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
283.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
281.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
278.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
276.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
275.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
274.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
274.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
273.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
273.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
272.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
272.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
272.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
271.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
269.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
268.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
267.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
263.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
261.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
259.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
257.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
257.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
255.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
254.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
254.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
251.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
251.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
246.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
246.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
246.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
246.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
245.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
244.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
243.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
242.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
242.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
240.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
240.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
237.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
237.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
237.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
235.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
232.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
231.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
231.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
231.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
229.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
228.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
228.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
227.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
226.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
222.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
221.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
221.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
218.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
218.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
217.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
217.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
217.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
216.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
216.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
215.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
215.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
215.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
214.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
211.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
210.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
210.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
208.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
207.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
207.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
205.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
201.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
200.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
199.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
197.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
196.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
195.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
194.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
193.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
192.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
191.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
191.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
189.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
189.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
189.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
188.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
188.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
186.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
185.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
184.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
184.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
181.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
181.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
181.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
180.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
179.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
179.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
177.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
176.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
173.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
172.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
170.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
168.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
168.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
168.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
168.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
167.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
166.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
165.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
164.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
163.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
163.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
162.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
159.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
157.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
155.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
153.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
153.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
152.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
152.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
150.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
150.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
150.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
148.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
148.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
147.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
146.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
146.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
146.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
145.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
144.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
144.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
142.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
140.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
139.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
139.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
138.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
138.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
137.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
136.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
136.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
135.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
135.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
132.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
131.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
130.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
128.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
127.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
127.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
126.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
125.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
124.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
124.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
123.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
121.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
121.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
120.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
119.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
119.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
119.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
119.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
118.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
116.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
114.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
114.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
113.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
112.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
111.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
111.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
111.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
109.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
108.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
104.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
102.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
102.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
101.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
97.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
97.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
93.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
92.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
86.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
85.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
85.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
80.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
76.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
73.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
72.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
72.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
71.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
70.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
69.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
68.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
67.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
64.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
63.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
62.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
62.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
61.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
61.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
59.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
59.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
58.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
58.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
57.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
43.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
42.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
38.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
36.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
34.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
32.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
22.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
22.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
21.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
20.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
9.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENOP is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
490.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
2882.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
1573.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
1251.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
1008.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
996.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
961.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
848.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
841.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
798.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
797.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
793.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
772.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
744.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
736.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
723.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
711.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
693.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
690.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
690.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
687.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
671.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
669.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
665.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
636.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
627.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
627.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
625.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
623.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
619.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
612.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
608.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
605.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
585.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
575.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
572.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
568.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
568.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
555.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
548.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
538.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
537.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
536.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
536.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
535.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
528.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
524.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
516.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
513.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
493.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
488.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
473.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
442.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
439.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
437.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
428.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
418.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
414.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
376.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
371.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
371.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
353.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
353.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
352.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
352.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
342.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
334.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
331.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
327.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
325.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
322.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
319.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
300.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
269.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
269.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
255.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
248.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
240.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
230.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
226.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
217.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
214.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
202.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
199.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
193.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
186.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
182.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
156.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
133.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
125.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
120.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
107.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
107.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
94.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
91.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
86.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
78.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
60.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
40.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
26.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENOP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
108.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
845.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
801.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
620.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
485.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
459.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
412.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
397.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
390.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
302.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
298.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
297.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
296.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
294.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
290.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
289.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
271.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
270.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
269.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
255.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
253.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
252.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
247.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
240.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
239.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
235.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
235.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
230.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
228.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
216.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
211.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
208.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
207.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
202.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
200.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
194.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
194.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
193.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
190.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
190.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
187.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
186.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
182.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
181.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
181.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
179.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
176.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
175.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
174.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
170.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
168.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
168.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
167.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
166.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
166.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
165.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
165.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
165.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
162.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
160.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
160.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
157.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
156.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
155.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
155.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
155.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
152.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
152.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
149.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
148.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
148.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
148.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
143.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
143.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
142.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
141.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
141.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
140.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
138.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
137.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
137.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
130.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
129.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
129.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
128.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
128.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
127.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
127.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
125.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
122.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
119.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
118.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
118.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
118.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
118.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
115.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
113.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
113.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
113.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
112.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
112.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
110.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
109.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
108.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
105.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
105.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
105.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
105.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
102.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
102.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
101.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
100.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
100.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
98.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
95.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
95.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
95.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
94.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
94.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
93.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
93.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
93.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
91.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
91.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
90.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
90.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
90.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
87.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
86.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
85.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
85.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
84.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
83.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
83.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
80.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
80.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
80.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
79.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
79.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
78.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
78.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
78.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
78.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
78.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
77.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
76.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
76.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
74.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
73.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
73.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
73.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
72.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
72.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
71.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
70.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
70.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
69.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
68.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
67.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
67.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
67.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
67.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
66.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
66.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
66.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
65.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
64.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
64.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
64.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
63.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
63.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
63.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
62.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
61.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
61.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
59.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
59.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
59.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
59.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
59.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
58.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
58.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
58.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
57.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
56.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
55.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
55.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
54.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
54.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
54.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
54.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
53.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
53.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
53.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
52.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
52.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
51.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
51.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
51.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
51.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
51.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
51.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
51.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
50.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
49.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
48.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
47.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
46.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
46.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
45.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
45.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
44.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
44.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
44.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
43.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
42.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
42.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
41.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
41.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
41.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
40.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
39.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
39.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
38.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
37.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
37.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
37.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
36.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
36.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
35.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
34.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
33.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
33.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
32.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
31.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
30.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
30.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
30.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
29.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
28.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
27.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
27.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
26.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
26.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
25.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
25.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
25.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
24.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
23.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
23.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
23.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
22.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
22.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
22.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
22.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
20.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
20.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
20.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
19.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
18.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
18.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
16.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
15.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
12.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
9.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
8.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
1.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0015910003
Tumor
1.4
CPT0063630003
Tumor
1.4
CPT0065930003
Tumor
1.2
CPT0000640003
Tumor
1.2
CPT0063320003
Tumor
1.2
CPT0010120001
Normal
1.1
CPT0066480003
Tumor
1.1
CPT0079300001
Normal
1.0
CPT0079510001
Normal
1.0
CPT0000780007
Tumor
0.8
CPT0081990003
Tumor
0.8
CPT0002370001
Normal
0.8
CPT0076330003
Tumor
0.8
CPT0086970003
Normal
0.7
CPT0026420001
Normal
0.7
CPT0007470001
Normal
0.7
CPT0087050003
Normal
0.7
CPT0064370003
Tumor
0.7
CPT0011240003
Tumor
0.7
CPT0014470001
Normal
0.7
CPT0009020003
Normal
0.7
CPT0002350011
Tumor
0.6
CPT0089480003
Normal
0.6
CPT0018250001
Normal
0.6
CPT0087040003
Tumor
0.6
CPT0077310003
Tumor
0.5
CPT0001220008
Tumor
0.5
CPT0025350003
Tumor
0.5
CPT0019160001
Normal
0.5
CPT0025110003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0086890003
Normal
0.5
CPT0012920003
Normal
0.5
CPT0069010001
Normal
0.5
CPT0065870003
Tumor
0.5
CPT0092190003
Normal
0.5
CPT0063330001
Normal
0.5
CPT0020130001
Normal
0.4
CPT0065820001
Normal
0.4
CPT0089020003
Tumor
0.4
CPT0001550001
Normal
0.4
CPT0066520001
Normal
0.4
CPT0088900003
Tumor
0.4
CPT0075170001
Normal
0.4
CPT0065690003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0081620001
Normal
0.4
CPT0084590001
Normal
0.4
CPT0092310003
Normal
0.4
CPT0064400001
Normal
0.4
CPT0006900003
Tumor
0.4
CPT0019130003
Tumor
0.3
CPT0013790003
Normal
0.3
CPT0069000003
Tumor
0.3
CPT0000790001
Normal
0.3
CPT0084560003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0025920001
Normal
0.3
CPT0006730001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0076350001
Normal
0.3
CPT0079380003
Tumor
0.3
CPT0025060001
Normal
0.3
CPT0065450001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0007870001
Normal
0.3
CPT0086830003
Normal
0.2
CPT0082010001
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0014350001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0077320001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0078840001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0001510001
Normal
0.2
CPT0089040001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0025170003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0025610001
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0010110003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0088480003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0009000003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0088710001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0065430003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0006530001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0066470004
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0079430001
Normal
-0.4
CPT0065810003
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0069160003
Tumor
-0.4
CPT0079480003
Tumor
-0.4
CPT0075560003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0081880003
Tumor
-0.5
CPT0006630003
Tumor
-0.5
CPT0088550004
Tumor
-0.5
CPT0001260009
Tumor
-0.6
CPT0025290003
Tumor
-0.6
CPT0025580004
Tumor
-0.6
CPT0020120003
Tumor
-0.6
CPT0075130003
Tumor
-0.6
CPT0025880003
Tumor
-0.6
CPT0002270011
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0078930003
Tumor
-0.6
CPT0014450004
Tumor
-0.6
CPT0089460004
Tumor
-0.7
CPT0001500009
Tumor
-0.7
CPT0079180003
Tumor
-0.7
CPT0086950003
Tumor
-0.7
CPT0088690003
Tumor
-0.7
CPT0012080003
Tumor
-0.7
CPT0078660003
Tumor
-0.7
CPT0079410003
Tumor
-0.8
CPT0023350003
Tumor
-0.8
CPT0086360003
Tumor
-0.8
CPT0025050003
Tumor
-0.8
CPT0012370003
Tumor
-0.9
CPT0086820003
Tumor
-0.9
CPT0009060003
Tumor
-0.9
CPT0078990003
Tumor
-0.9
CPT0001340003
Tumor
-0.9
CPT0026410003
Tumor
-1.0
CPT0001180009
Tumor
-1.0
CPT0012670003
Tumor
-1.1
CPT0012280003
Tumor
-1.1
CPT0079270003
Tumor
-1.2
CPT0001540009
Tumor
-1.2
CPT0077110003
Tumor
-1.2
CPT0024670003
Tumor
-1.2
CPT0088970003
Tumor
-1.4
CPT0015730003
Tumor
-1.5
CPT0012180003
Tumor
-1.9
CPT0078800003
Tumor
-2.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.