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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
61.1
nTPM
GTEx:
61.1
nTPM
FANTOM5:
416.6
Scaled Tags Per Million
Pig:
174.4
nTPM
Mouse:
68.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
61.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 61.1
Samples: 105
Max nTPM: 127.7
Min nTPM: 12.0
Std nTPM: 30.4
Median nTPM:
352_1
62 years, male
127.7
319_1
81 years, male
127.3
354_1
81 years, female
124.4
377_1
82 years, female
119.1
356_1
87 years, female
115.3
163_1
78 years, male
112.5
177_1
74 years, male
112.4
386_1
76 years, male
112.3
351_1
91 years, male
110.7
218_1
71 years, female
110.6
452_1
88 years, female
107.1
243_1
75 years, male
102.5
376_1
75 years, female
101.0
350_1
84 years, female
100.5
353_1
82 years, female
98.6
394_1
75 years, female
97.0
295_1
61 years, female
94.6
349_1
83 years, male
94.5
355_1
70 years, female
91.7
379_1
60 years, male
91.3
447_1
81 years, male
90.1
506_1
65 years, male
90.0
316_1
62 years, male
89.4
172_1
72 years, female
86.8
322_1
76 years, male
86.7
480_1
63 years, male
86.6
292_1
71 years, male
84.1
320_1
89 years, female
84.0
286_1
68 years, female
81.4
384_1
83 years, male
78.4
321_1
62 years, female
77.6
318_1
68 years, male
77.5
406_1
79 years, male
76.5
375_1
74 years, female
76.4
251_1
78 years, male
76.3
503_1
68 years, male
74.6
389_1
86 years, female
72.6
425_1
59 years, female
71.9
396_1
62 years, male
71.5
189_1
76 years, male
68.7
237_1
82 years, male
68.5
404_1
82 years, female
68.1
264_1
73 years, female
67.9
293_1
68 years, female
67.6
335_1
73 years, female
66.9
348_1
84 years, male
65.6
517_1
88 years, male
64.6
173_1
67 years, male
64.5
405_1
91 years, male
64.5
6_1
73 years, female
64.0
468_1
89 years, male
59.4
229_1
69 years, female
58.7
246_1
77 years, male
58.1
291_1
76 years, male
57.0
317_1
60 years, male
57.0
347_1
72 years, male
56.6
526_1
61 years, male
55.5
4_1
88 years, female
53.9
2_1
77 years, female
53.4
265_1
87 years, male
53.4
17_1
71 years, male
49.5
99_1
64 years, male
49.2
266_1
85 years, male
48.4
254_1
77 years, female
47.9
518_1
75 years, female
45.6
35_1
74 years, female
45.3
217_1
76 years, male
45.2
311_1
78 years, male
42.9
115_1
83 years, male
42.7
153_1
70 years, female
41.7
18_1
88 years, male
40.2
145_1
84 years, male
40.1
288_1
66 years, female
39.9
120_1
70 years, female
38.9
324_1
76 years, male
38.6
9_1
66 years, female
37.9
314_1
67 years, male
36.0
315_1
62 years, female
35.9
137_1
83 years, male
35.7
109_1
81 years, female
34.7
41_1
94 years, female
33.8
499_1
55 years, female
33.1
414_1
84 years, female
33.0
126_1
63 years, male
32.7
313_1
79 years, female
32.6
142_1
61 years, female
30.2
139_1
64 years, female
28.0
81_1
67 years, male
27.8
415_1
77 years, female
26.8
162_1
79 years, female
26.6
307_1
66 years, female
26.2
42_1
85 years, male
24.5
43_1
64 years, female
24.4
117_1
61 years, male
24.1
466_1
57 years, female
23.3
413_1
59 years, female
22.9
32_1
67 years, male
22.6
119_1
70 years, female
20.6
501_1
88 years, male
20.4
490_1
67 years, female
18.4
495_1
57 years, female
18.0
89_1
63 years, male
14.2
149_1
88 years, male
13.6
308_1
70 years, female
13.2
491_1
89 years, female
12.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
