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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM199 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
16.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
15.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
14.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
13.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
12.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
12.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
12.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
12.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
11.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
10.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
9.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
9.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
9.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
8.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
8.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
8.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
8.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
7.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
7.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
7.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
7.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
6.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
6.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
4.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM199 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
29.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
23.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
19.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
18.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
18.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
17.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
16.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
16.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
16.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
15.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
15.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
15.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
15.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
15.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
15.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
15.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
15.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
15.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
15.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
14.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
14.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
14.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
14.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
14.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
14.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
14.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
14.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
14.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
13.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
13.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
13.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
13.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
13.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
13.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
13.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
13.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
13.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
13.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
13.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
13.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
13.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
13.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
13.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
13.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
13.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
13.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
13.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
13.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
13.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
13.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
13.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
12.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
12.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
12.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
12.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
12.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
12.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
12.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
12.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
12.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
12.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
12.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
12.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
12.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
12.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
12.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
12.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
12.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
12.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
12.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
12.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
12.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
12.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
12.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
11.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
11.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
11.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
11.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
11.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
11.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
11.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
11.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
11.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
11.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
11.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
11.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
11.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
11.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
11.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
11.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
11.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
11.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
11.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
11.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
11.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
11.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
11.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
10.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
10.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
10.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
10.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
10.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
10.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
10.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
10.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
10.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
10.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
10.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
10.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
10.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
10.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
10.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
10.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
10.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
10.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
10.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
10.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
10.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
10.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
10.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
10.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
10.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
10.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
10.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
10.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
10.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
10.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
10.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
10.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
9.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
9.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
9.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
9.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
9.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
9.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
9.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
9.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
9.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
9.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
9.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
9.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
9.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
9.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
9.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
9.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
9.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
9.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
9.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
9.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
9.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
8.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
8.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
8.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
8.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
8.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
8.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
8.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
8.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
8.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
8.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
8.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
8.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
8.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
8.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
8.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
8.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
8.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
7.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
7.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
6.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
6.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
6.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
6.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
6.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
3.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM199 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
19.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
19.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
17.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
17.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
17.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
16.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
16.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
16.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
15.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
15.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
15.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
15.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
14.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
14.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
14.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
14.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
14.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
14.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
13.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
13.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
13.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
13.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
13.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
13.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
12.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
12.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
12.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
12.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
11.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
11.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
11.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
11.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
11.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
11.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
10.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
10.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
9.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
9.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
9.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
9.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
8.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
8.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
7.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM199 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
45.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
40.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
38.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
38.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
35.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
34.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
34.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
33.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
27.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
26.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
25.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
24.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
24.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
23.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
23.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
22.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
22.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
22.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
21.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
21.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
20.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
20.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
20.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
20.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
20.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
20.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
19.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
19.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
19.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
19.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
19.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
19.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
19.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
18.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
18.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
18.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
18.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
17.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
17.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
17.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
17.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
17.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
17.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
17.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
16.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
16.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
16.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
16.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
16.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
16.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
16.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
15.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
15.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
15.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
15.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
15.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
15.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
15.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
15.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
15.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
15.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
15.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
14.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
14.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
14.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
14.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
14.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
14.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
14.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
14.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
14.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
14.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
14.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
14.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
14.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
14.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
13.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
13.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
13.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
13.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
13.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
13.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
13.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
13.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
12.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
12.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
12.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
12.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
12.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
11.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
11.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
11.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
11.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
11.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
11.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
11.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
10.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
10.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
10.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
10.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
10.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
10.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
10.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
10.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
10.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
9.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
9.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
9.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
9.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
9.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
9.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
9.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
9.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
8.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
8.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
8.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
7.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
7.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
6.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
6.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
6.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
6.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
5.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
4.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
3.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
2.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
1.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
1.0
CPT0079270003
Tumor
0.9
CPT0001340003
Tumor
0.9
CPT0002270011
Tumor
0.9
CPT0023350003
Tumor
0.8
CPT0078800003
Tumor
0.7
CPT0025110003
Tumor
0.7
CPT0092740003
Normal
0.7
CPT0001180009
Tumor
0.6
CPT0001230001
Normal
0.6
CPT0001500009
Tumor
0.6
CPT0092310003
Normal
0.6
CPT0086950003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0086970003
Normal
0.5
CPT0079430001
Normal
0.5
CPT0088710001
Normal
0.5
CPT0092800003
Normal
0.5
CPT0089040001
Normal
0.5
CPT0079480003
Tumor
0.5
CPT0000790001
Normal
0.5
CPT0025580004
Tumor
0.5
CPT0089020003
Tumor
0.5
CPT0078990003
Tumor
0.4
CPT0010170001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0023360001
Normal
0.3
CPT0087050003
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0089480003
Normal
0.3
CPT0086370003
Normal
0.3
CPT0006530001
Normal
0.3
CPT0075130003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0086830003
Normal
0.3
CPT0025880003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0078840001
Normal
0.3
CPT0087040003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0065820001
Normal
0.3
CPT0065930003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0088780001
Normal
0.2
CPT0079230003
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0086360003
Tumor
0.2
CPT0077140001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0088500001
Normal
0.2
CPT0077110003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0086890003
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0076330003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0007470001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0012180003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0081880003
Tumor
-0.2
CPT0015730003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0013790003
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0026410003
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0088760003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0075560003
Tumor
-0.3
CPT0082010001
Normal
-0.4
CPT0069000003
Tumor
-0.4
CPT0069010001
Normal
-0.4
CPT0025290003
Tumor
-0.4
CPT0077490003
Tumor
-0.4
CPT0088900003
Tumor
-0.5
CPT0014160003
Tumor
-0.5
CPT0014470001
Normal
-0.5
CPT0085670003
Tumor
-0.5
CPT0012370003
Tumor
-0.5
CPT0066480003
Tumor
-0.5
CPT0092290003
Tumor
-0.6
CPT0024670003
Tumor
-0.6
CPT0012280003
Tumor
-0.6
CPT0025610001
Normal
-0.6
CPT0006900003
Tumor
-0.6
CPT0015910003
Tumor
-0.6
CPT0065690003
Tumor
-0.6
CPT0000780007
Tumor
-0.6
CPT0079180003
Tumor
-0.6
CPT0006630003
Tumor
-0.6
CPT0012550003
Tumor
-0.7
CPT0081990003
Tumor
-0.7
CPT0078510003
Tumor
-0.8
CPT0017850003
Tumor
-0.8
CPT0012290003
Normal
-0.8
CPT0012770003
Normal
-0.9
CPT0009000003
Tumor
-0.9
CPT0012090003
Normal
-0.9
CPT0069160003
Tumor
-1.0
CPT0012570003
Normal
-1.1
CPT0017450001
Normal
-1.3
CPT0012640003
Normal
-1.3
CPT0024680001
Normal
-1.3
CPT0009020003
Normal
-1.4
CPT0012080003
Tumor
-1.5
CPT0021240003
Tumor
-1.5
CPT0009060003
Tumor
-1.6
CPT0018250001
Normal
-1.7
CPT0009080003
Normal
-1.7
CPT0012670003
Tumor
-1.8
CPT0011240003
Tumor
-1.9
CPT0012920003
Normal
-1.9
CPT0012900004
Tumor
-2.1
CPT0017410003
Tumor
-2.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
