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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
13.4
nTPM
GTEx:
13.4
nTPM
FANTOM5:
30.2
Scaled Tags Per Million
Pig:
19.5
nTPM
Mouse:
36.9
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
13.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 13.4
Samples: 105
Max nTPM: 27.2
Min nTPM: 9.4
Std nTPM: 2.4
Median nTPM:
308_1
70 years, female
27.2
347_1
72 years, male
18.5
466_1
57 years, female
18.3
89_1
63 years, male
18.1
41_1
94 years, female
17.2
490_1
67 years, female
17.0
495_1
57 years, female
17.0
99_1
64 years, male
16.8
117_1
61 years, male
16.8
42_1
85 years, male
16.7
120_1
70 years, female
16.7
315_1
62 years, female
16.3
414_1
84 years, female
16.1
254_1
77 years, female
15.9
317_1
60 years, male
15.8
246_1
77 years, male
15.5
307_1
66 years, female
15.4
499_1
55 years, female
15.4
119_1
70 years, female
15.2
9_1
66 years, female
15.0
149_1
88 years, male
15.0
162_1
79 years, female
14.9
404_1
82 years, female
14.9
405_1
91 years, male
14.9
35_1
74 years, female
14.8
115_1
83 years, male
14.8
18_1
88 years, male
14.7
413_1
59 years, female
14.7
447_1
81 years, male
14.6
189_1
76 years, male
14.5
526_1
61 years, male
14.5
243_1
75 years, male
14.4
384_1
83 years, male
14.2
32_1
67 years, male
14.1
137_1
83 years, male
14.1
355_1
70 years, female
14.1
491_1
89 years, female
14.0
139_1
64 years, female
13.9
375_1
74 years, female
13.9
468_1
89 years, male
13.9
126_1
63 years, male
13.7
251_1
78 years, male
13.7
415_1
77 years, female
13.7
43_1
64 years, female
13.6
265_1
87 years, male
13.6
311_1
78 years, male
13.6
425_1
59 years, female
13.6
313_1
79 years, female
13.5
266_1
85 years, male
13.4
406_1
79 years, male
13.4
153_1
70 years, female
13.3
237_1
82 years, male
13.3
319_1
81 years, male
13.3
324_1
76 years, male
13.3
377_1
82 years, female
13.1
389_1
86 years, female
13.1
350_1
84 years, female
13.0
292_1
71 years, male
12.9
2_1
77 years, female
12.8
172_1
72 years, female
12.8
173_1
67 years, male
12.8
109_1
81 years, female
12.7
480_1
63 years, male
12.7
501_1
88 years, male
12.7
142_1
61 years, female
12.6
349_1
83 years, male
12.6
318_1
68 years, male
12.3
394_1
75 years, female
12.3
352_1
62 years, male
12.2
396_1
62 years, male
12.1
6_1
73 years, female
12.0
218_1
71 years, female
12.0
291_1
76 years, male
12.0
356_1
87 years, female
12.0
145_1
84 years, male
11.9
351_1
91 years, male
11.9
386_1
76 years, male
11.8
293_1
68 years, female
11.7
286_1
68 years, female
11.5
517_1
88 years, male
11.5
4_1
88 years, female
11.4
264_1
73 years, female
11.4
314_1
67 years, male
11.3
321_1
62 years, female
11.3
518_1
75 years, female
11.3
17_1
71 years, male
11.2
295_1
61 years, female
11.2
335_1
73 years, female
11.2
379_1
60 years, male
11.2
452_1
88 years, female
11.2
503_1
68 years, male
11.2
229_1
69 years, female
11.0
217_1
76 years, male
10.9
81_1
67 years, male
10.8
354_1
81 years, female
10.8
320_1
89 years, female
10.7
322_1
76 years, male
10.7
177_1
74 years, male
10.6
353_1
82 years, female
10.6
163_1
78 years, male
10.5
506_1
65 years, male
10.5
376_1
75 years, female
10.4
348_1
84 years, male
10.1
316_1
62 years, male
9.8
288_1
66 years, female
9.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
