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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
7.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
5.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
4.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
4.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
3.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSTA1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
262.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
1726.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1436.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
1315.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
1307.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1244.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
1213.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
1205.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
1204.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
1169.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
1157.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
1156.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
1131.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
1127.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1109.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
1094.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
1085.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
1072.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
1064.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
1001.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
984.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
966.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
950.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
943.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
931.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
927.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
920.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
915.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
903.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
890.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
874.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
849.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
840.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
839.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
838.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
832.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
786.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
758.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
752.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
736.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
723.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
719.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
711.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
708.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
690.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
689.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
687.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
678.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
661.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
653.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
646.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
641.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
637.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
635.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
630.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
625.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
606.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
604.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
594.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
594.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
587.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
585.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
580.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
578.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
575.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
571.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
567.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
566.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
564.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
564.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
556.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
555.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
543.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
538.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
531.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
530.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
528.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
527.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
524.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
522.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
516.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
512.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
509.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
496.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
495.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
494.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
492.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
485.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
479.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
474.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
474.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
471.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
461.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
460.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
458.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
455.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
455.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
454.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
453.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
453.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
450.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
441.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
426.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
424.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
422.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
420.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
420.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
418.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
418.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
417.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
414.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
413.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
407.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
404.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
404.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
402.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
402.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
398.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
397.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
395.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
388.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
388.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
382.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
382.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
382.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
380.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
377.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
376.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
372.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
371.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
367.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
367.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
367.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
366.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
363.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
363.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
358.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
355.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
352.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
346.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
346.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
345.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
344.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
341.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
338.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
334.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
330.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
327.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
325.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
323.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
321.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
320.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
320.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
318.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
318.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
316.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
316.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
315.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
315.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
314.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
314.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
308.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
306.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
303.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
303.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
302.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
300.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
299.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
298.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
298.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
296.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
296.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
294.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
293.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
292.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
290.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
290.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
290.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
290.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
285.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
283.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
280.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
279.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
277.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
277.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
275.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
275.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
273.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
270.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
266.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
264.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
260.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
259.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
258.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
255.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
254.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
253.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
251.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
246.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
245.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
243.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
238.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
238.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
236.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
236.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
235.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
235.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
233.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
232.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
230.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
228.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
223.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
220.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
220.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
217.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
217.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
216.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
213.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
213.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
211.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
210.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
208.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
207.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
207.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
206.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
205.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
203.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
202.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
201.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
199.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
199.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
197.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
197.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
196.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
194.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
193.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
192.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
191.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
190.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
190.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
190.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
189.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
187.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
185.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
185.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
185.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
184.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
184.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
184.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
183.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
182.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
181.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
181.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
179.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
179.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
179.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
178.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
178.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
178.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
176.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
176.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
174.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
173.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
173.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
170.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
169.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
167.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
165.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
164.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
163.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
162.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
162.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
161.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
161.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
160.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
160.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
158.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
158.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
157.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
156.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
156.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
156.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
152.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
149.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
146.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
145.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
142.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
142.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
140.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
140.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
139.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
138.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
138.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
136.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
136.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
135.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
134.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
133.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
132.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
132.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
131.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
130.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
128.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
128.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
125.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
125.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
124.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
124.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
124.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
124.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
123.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
122.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
121.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
120.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
120.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
120.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
119.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
118.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
116.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
115.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
115.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
115.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
114.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
112.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
112.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
110.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
110.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
107.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
106.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
105.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
105.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
104.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
104.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
103.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
102.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
102.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
101.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
101.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
100.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
100.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
98.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
97.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
96.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
96.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
95.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
95.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
92.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
90.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
90.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
89.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
88.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
83.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
83.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
82.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
81.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
78.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
78.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
78.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
76.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
76.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
75.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
74.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
74.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
74.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
74.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
73.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
72.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
72.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
71.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
71.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
70.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
70.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
69.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
68.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
67.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
64.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
63.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
63.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
61.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
61.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
61.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
60.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
60.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
59.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
58.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
58.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
57.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
57.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
57.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
55.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
55.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
54.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
54.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
54.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
54.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
51.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
50.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
49.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
48.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
47.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
46.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
46.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
44.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
43.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
43.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
43.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
42.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
42.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
40.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
39.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
39.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
39.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
37.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
37.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
36.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
36.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
34.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
34.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
34.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
33.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
33.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
32.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
31.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
29.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
28.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
28.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
27.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
26.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
26.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
25.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
24.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
23.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
23.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
23.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
22.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
22.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
22.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
21.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
21.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
20.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
19.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
17.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
14.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
13.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
8.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
7.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
6.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
6.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
6.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
5.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
4.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
3.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
3.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
3.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
2.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
2.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
2.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
2.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
2.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
2.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
1.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
1.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
1.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
1.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
0.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
0.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
0.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
0.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSTA1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
351.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
1713.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
1638.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
1540.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
1473.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
1326.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
1307.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
1165.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
1023.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
1016.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
918.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
888.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
879.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
846.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
800.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
745.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
654.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
645.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
606.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
567.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
551.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
537.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
536.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
483.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
480.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
463.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
463.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
461.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
453.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
449.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
428.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
423.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
421.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
412.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
398.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
378.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
369.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
361.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
333.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
307.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
299.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
292.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
285.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
272.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
261.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
258.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
243.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
238.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
226.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
222.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
213.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
194.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
174.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
171.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
167.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
160.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
150.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
140.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
139.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
138.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
136.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
129.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
120.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
119.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
118.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
117.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
117.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
105.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
95.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
93.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
93.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
88.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
86.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
83.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
82.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
79.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
72.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
72.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
67.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
66.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
62.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
62.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
46.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
45.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
45.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
40.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
38.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
33.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
28.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
28.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
24.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
10.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
9.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
5.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
2.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
0.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSTA1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
538.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
255.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
192.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
172.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
139.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
133.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
119.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
64.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
62.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
61.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
59.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
58.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
58.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
57.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
56.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
56.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
54.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
51.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
50.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
49.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
46.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
45.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
45.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
38.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
31.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
31.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
30.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
25.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
25.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
24.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
23.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
23.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
21.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
16.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
14.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
14.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
14.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
13.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
12.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
12.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
10.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
10.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
9.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
9.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
9.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
9.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
8.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
8.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
8.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
7.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
7.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
6.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
6.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
6.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
5.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
4.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
3.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
3.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
3.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
3.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
3.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
2.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
2.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
2.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
2.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
2.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
2.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
2.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
1.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
1.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
1.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
1.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
1.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
1.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
1.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
1.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
1.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
1.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
1.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
1.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
1.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
1.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
1.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
0.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
0.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
0.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
0.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
0.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
0.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
0.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
0.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
0.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
0.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
0.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
0.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
0.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
0.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
0.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
0.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
0.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
0.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
0.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
0.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
0.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
0.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
0.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
0.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
0.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
0.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
0.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
0.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
0.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
0.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
0.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
0.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
0.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
0.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
0.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
0.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
0.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
0.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
0.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
0.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
0.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
0.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
0.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
0.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
0.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
0.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
0.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
0.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
0.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
0.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
0.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
0.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
0.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
0.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
0.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
0.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
0.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088690003
Tumor
1.2
CPT0025110003
Tumor
1.2
CPT0092800003
Normal
1.1
CPT0010170001
Normal
1.0
CPT0026420001
Normal
1.0
CPT0088920001
Normal
1.0
CPT0012280003
Tumor
1.0
CPT0082010001
Normal
1.0
CPT0079480003
Tumor
1.0
CPT0025880003
Tumor
0.9
CPT0077140001
Normal
0.9
CPT0065450001
Normal
0.9
CPT0023360001
Normal
0.9
CPT0066430001
Normal
0.9
CPT0081620001
Normal
0.9
CPT0079270003
Tumor
0.8
CPT0078940001
Normal
0.8
CPT0012770003
Normal
0.8
CPT0071150004
Tumor
0.7
CPT0009080003
Normal
0.7
CPT0089480003
Normal
0.7
CPT0079000001
Normal
0.7
CPT0006730001
Normal
0.7
CPT0001540009
Tumor
0.7
CPT0077500001
Normal
0.7
CPT0087050003
Normal
0.7
CPT0025060001
Normal
0.7
CPT0078670001
Normal
0.7
CPT0012900004
Tumor
0.7
CPT0092740003
Normal
0.6
CPT0007470001
Normal
0.6
CPT0015730003
Tumor
0.6
CPT0007870001
Normal
0.6
CPT0025610001
Normal
0.6
CPT0078530001
Normal
0.6
CPT0020130001
Normal
0.6
CPT0012090003
Normal
0.6
CPT0000790001
Normal
0.5
CPT0075570001
Normal
0.5
CPT0078840001
Normal
0.5
CPT0025230003
Tumor
0.5
CPT0064400001
Normal
0.5
CPT0023710001
Normal
0.5
CPT0086970003
Normal
0.5
CPT0019990003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0000870016
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0069010001
Normal
0.4
CPT0001500009
Tumor
0.4
CPT0012290003
Normal
0.4
CPT0092310003
Normal
0.4
CPT0012570003
Normal
0.4
CPT0086890003
Normal
0.4
CPT0086370003
Normal
0.4
CPT0001350001
Normal
0.4
CPT0009020003
Normal
0.4
CPT0065810003
Tumor
0.3
CPT0088640003
Normal
0.3
CPT0088710001
Normal
0.3
CPT0063330001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0014350001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0000890001
Normal
0.3
CPT0006950001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0066520001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0009000003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0019160001
Normal
0.2
CPT0092290003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0020020001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0001510001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0012370003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0012080003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0025050003
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0078830003
Tumor
-0.4
CPT0000660001
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0086030003
Tumor
-0.4
CPT0088900003
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0017410003
Tumor
-0.5
CPT0015910003
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0001230001
Normal
-0.6
CPT0085670003
Tumor
-0.6
CPT0006530001
Normal
-0.6
CPT0019130003
Tumor
-0.6
CPT0088760003
Tumor
-0.6
CPT0077310003
Tumor
-0.6
CPT0000780007
Tumor
-0.7
CPT0066480003
Tumor
-0.7
CPT0092160003
Tumor
-0.7
CPT0001190001
Normal
-0.7
CPT0001270001
Normal
-0.7
CPT0078510003
Tumor
-0.7
CPT0069190001
Normal
-0.8
CPT0089460004
Tumor
-0.8
CPT0025170003
Tumor
-0.8
CPT0088630003
Tumor
-0.8
CPT0088500001
Normal
-0.8
CPT0079510001
Normal
-0.8
CPT0025350003
Tumor
-0.8
CPT0078930003
Tumor
-0.8
CPT0086870003
Tumor
-0.9
CPT0075170001
Normal
-0.9
CPT0010120001
Normal
-0.9
CPT0065750003
Tumor
-0.9
CPT0001260009
Tumor
-1.0
CPT0092730003
Tumor
-1.0
CPT0001180009
Tumor
-1.0
CPT0086950003
Tumor
-1.0
CPT0000640003
Tumor
-1.0
CPT0063630003
Tumor
-1.1
CPT0089020003
Tumor
-1.1
CPT0014450004
Tumor
-1.1
CPT0023690003
Tumor
-1.1
CPT0023350003
Tumor
-1.1
CPT0069160003
Tumor
-1.1
CPT0081880003
Tumor
-1.1
CPT0006440003
Tumor
-1.1
CPT0087040003
Tumor
-1.1
CPT0079300001
Normal
-1.2
CPT0076330003
Tumor
-1.2
CPT0010160003
Tumor
-1.2
CPT0026410003
Tumor
-1.3
CPT0077490003
Tumor
-1.3
CPT0014370004
Tumor
-1.3
CPT0075560003
Tumor
-1.3
CPT0069000003
Tumor
-1.3
CPT0079410003
Tumor
-1.3
CPT0025290003
Tumor
-1.4
CPT0006900003
Tumor
-1.5
CPT0025580004
Tumor
-1.5
CPT0077110003
Tumor
-1.5
CPT0065690003
Tumor
-1.5
CPT0002270011
Tumor
-1.5
CPT0012640003
Normal
-1.6
CPT0010110003
Tumor
-1.6
CPT0088970003
Tumor
-1.7
CPT0079380003
Tumor
-1.7
CPT0079180003
Tumor
-1.8
CPT0092190003
Normal
-1.8
CPT0084590001
Normal
-1.8
CPT0009060003
Tumor
-1.8
CPT0088550004
Tumor
-1.9
CPT0011410003
Tumor
-1.9
CPT0084560003
Tumor
-1.9
CPT0077320001
Normal
-1.9
CPT0078800003
Tumor
-1.9
CPT0012670003
Tumor
-1.9
CPT0001340003
Tumor
-1.9
CPT0012180003
Tumor
-2.0
CPT0017850003
Tumor
-2.0
CPT0078660003
Tumor
-2.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
