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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSTA1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
608.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
4132.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
3747.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
3576.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3535.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
2951.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2706.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
2601.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
2355.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
2327.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2300.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2288.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
2220.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
2173.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2085.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
2065.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1972.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1941.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1887.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
1859.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1833.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
1831.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
1829.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1827.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1776.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
1765.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1755.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1750.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1690.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1672.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1669.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1640.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1618.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1578.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1521.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1462.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1428.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
1396.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1391.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1338.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1336.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1259.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1258.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
1243.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1219.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
1214.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1210.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
1197.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1193.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1193.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
1179.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1167.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1164.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1138.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1133.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
1124.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1123.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1121.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1119.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1115.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1115.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1108.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1106.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1102.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1097.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1091.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1086.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1082.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1065.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1052.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
1049.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1034.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1020.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1009.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
977.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
937.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
931.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
931.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
931.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
928.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
928.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
926.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
923.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
921.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
913.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
911.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
902.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
901.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
900.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
894.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
894.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
876.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
857.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
855.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
842.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
839.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
837.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
822.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
817.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
810.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
804.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
800.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
796.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
786.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
785.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
780.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
774.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
773.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
773.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
735.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
733.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
729.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
724.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
721.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
719.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
718.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
718.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
716.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
714.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
708.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
700.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
696.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
686.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
680.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
676.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
676.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
672.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
662.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
659.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
656.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
656.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
646.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
645.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
638.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
630.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
628.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
618.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
616.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
615.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
615.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
609.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
606.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
595.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
590.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
585.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
583.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
582.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
573.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
571.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
567.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
565.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
556.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
547.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
546.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
545.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
540.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
530.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
519.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
517.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
512.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
511.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
500.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
497.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
484.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
483.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
480.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
473.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
468.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
463.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
455.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
452.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
451.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
449.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
441.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
425.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
420.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
419.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
419.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
416.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
414.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
414.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
405.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
402.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
399.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
397.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
395.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
389.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
383.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
380.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
356.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
356.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
355.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
352.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
350.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
348.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
342.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
341.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
338.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
338.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
335.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
333.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
333.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
331.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
317.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
313.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
309.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
308.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
302.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
300.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
298.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
295.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
293.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
293.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
292.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
291.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
289.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
288.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
276.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
276.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
275.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
269.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
269.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
267.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
261.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
258.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
255.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
252.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
252.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
251.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
251.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
248.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
247.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
244.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
241.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
237.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
236.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
234.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
234.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
234.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
227.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
221.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
220.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
218.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
212.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
208.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
204.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
202.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
202.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
193.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
188.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
187.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
185.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
182.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
182.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
181.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
180.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
173.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
173.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
170.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
169.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
167.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
165.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
157.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
153.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
152.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
151.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
150.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
148.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
148.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
146.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
145.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
143.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
140.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
138.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
131.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
130.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
129.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
120.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
119.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
118.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
112.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
105.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
105.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
99.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
99.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
98.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
98.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
97.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
97.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
96.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
94.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
91.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
90.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
88.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
86.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
85.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
78.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
78.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
77.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
74.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
71.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
66.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
59.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
58.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
56.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
54.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
51.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
50.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
48.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
45.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
44.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
44.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
42.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
40.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
39.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
35.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
28.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
27.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
23.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
22.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
21.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
21.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
19.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
19.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
18.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
17.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
16.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
15.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
15.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
14.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
12.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
11.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
10.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
8.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
5.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
5.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
4.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
3.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
2.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
1.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
0.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
0.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
0.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
0.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
0.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
0.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSTA1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
653.3
Number of samples
231
Samples
Sample
Description
TPM
DO48759
0 years, male, NA, stage:3, alive, 720 days
5701.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
3141.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
3068.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
2671.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
2405.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
2238.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
2124.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
2018.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1781.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
1775.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
1723.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
1708.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
1655.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1635.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
1626.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
1571.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
1565.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
1511.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
1506.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
1501.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
1494.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
1396.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
1392.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
1370.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
1341.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
1300.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
1286.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
1276.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
1262.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
1247.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
1239.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
1193.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1176.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
1174.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
1164.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
1159.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1158.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
1155.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1155.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1150.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
1127.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
1109.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1099.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
1057.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
1051.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
1046.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1041.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
1009.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1008.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
1000.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
987.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
987.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
973.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
967.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
956.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
954.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
954.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
952.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
942.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
925.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
918.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
909.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
907.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
899.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
888.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
862.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
860.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
850.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
828.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
828.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
826.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
826.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
825.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
823.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
817.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
815.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
803.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
803.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
794.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
761.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
760.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
752.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
730.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
724.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
719.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
717.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
705.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
688.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
682.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
678.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
671.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
667.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
665.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
657.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
625.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
621.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
619.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
609.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
581.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
571.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
562.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
560.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
557.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
556.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
553.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
553.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
550.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
548.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
539.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
535.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
531.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
524.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
523.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
518.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
511.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
505.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
504.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
500.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
498.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
494.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
494.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
477.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
476.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
471.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
462.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
462.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
452.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
451.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
448.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
448.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
440.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
439.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
426.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
424.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
423.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
405.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
403.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
393.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
391.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
377.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
372.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
358.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
350.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
346.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
334.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
334.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
329.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
327.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
326.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
321.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
319.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
308.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
304.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
291.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
283.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
281.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
269.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
263.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
261.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
256.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
255.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
251.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
248.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
247.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
246.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
245.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
219.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
210.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
203.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
202.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
201.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
197.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
195.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
185.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
178.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
176.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
176.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
166.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
160.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
159.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
153.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
149.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
144.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
124.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
124.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
120.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
118.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
115.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
114.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
113.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
113.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
98.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
92.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
89.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
85.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
85.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
81.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
81.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
80.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
80.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
64.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
60.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
54.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
48.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
45.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
36.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
34.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
24.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
16.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
14.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
13.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
13.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
13.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
9.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
8.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
7.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
6.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
5.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
4.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
3.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
3.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
2.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
1.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
1.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
1.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
1.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
0.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
698
Normal
1.2
428
Normal
1.1
482
Normal
1.1
342
Normal
1.1
222
Normal
1.1
196
Normal
1.0
436
Normal
1.0
964
Normal
1.0
111
Normal
1.0
426
Normal
1.0
824
Normal
1.0
818
Normal
1.0
1046
Normal
1.0
723
Tumor
1.0
1026
Normal
0.9
912
Normal
0.9
162
Normal
0.9
744
Normal
0.8
258
Normal
0.8
358
Normal
0.8
416
Normal
0.8
415
Tumor
0.8
432
Normal
0.8
481
Tumor
0.8
298
Normal
0.8
366
Normal
0.8
882
Normal
0.8
858
Normal
0.8
128
Normal
0.8
314
Normal
0.8
388
Normal
0.8
926
Normal
0.8
742
Normal
0.8
472
Normal
0.8
394
Normal
0.8
618
Normal
0.8
353
Tumor
0.8
648
Normal
0.8
714
Normal
0.7
186
Normal
0.7
982
Normal
0.7
414
Normal
0.7
424
Normal
0.7
464
Normal
0.7
862
Normal
0.7
114
Normal
0.7
422
Normal
0.7
132
Normal
0.7
146
Normal
0.7
364
Normal
0.7
172
Normal
0.7
396
Normal
0.7
663
Tumor
0.7
456
Normal
0.7
924
Normal
0.7
756
Normal
0.7
278
Normal
0.7
1045
Tumor
0.7
354
Normal
0.7
616
Normal
0.6
462
Normal
0.6
332
Normal
0.6
666
Normal
0.6
534
Normal
0.6
136
Normal
0.6
488
Normal
0.6
568
Normal
0.6
664
Normal
0.6
376
Normal
0.6
938
Normal
0.6
786
Normal
0.6
738
Normal
0.6
272
Normal
0.6
412
Normal
0.6
1042
Normal
0.6
232
Normal
0.6
746
Normal
0.6
914
Normal
0.6
484
Normal
0.6
615
Tumor
0.5
218
Normal
0.5
864
Normal
0.5
212
Normal
0.5
356
Normal
0.5
214
Normal
0.5
1016
Normal
0.5
446
Normal
0.5
518
Normal
0.5
228
Normal
0.5
148
Normal
0.5
448
Normal
0.5
662
Normal
0.5
1044
Normal
0.4
866
Normal
0.4
1022
Normal
0.4
878
Normal
0.4
362
Normal
0.4
514
Normal
0.4
628
Normal
0.4
564
Normal
0.4
138
Normal
0.4
695
Tumor
0.4
546
Normal
0.4
728
Normal
0.4
433
Tumor
0.4
966
Normal
0.4
956
Normal
0.4
466
Normal
0.4
944
Normal
0.4
142
Normal
0.4
1032
Normal
0.4
636
Normal
0.4
722
Normal
0.4
696
Normal
0.4
286
Normal
0.3
267
Tumor
0.3
976
Normal
0.3
262
Normal
0.3
352
Normal
0.3
922
Normal
0.3
474
Normal
0.3
312
Normal
0.3
126
Normal
0.3
452
Normal
0.3
642
Normal
0.3
572
Normal
0.3
386
Normal
0.3
868
Normal
0.2
816
Normal
0.2
344
Normal
0.2
716
Normal
0.2
516
Normal
0.2
526
Normal
0.2
1014
Normal
0.2
884
Normal
0.2
686
Normal
0.2
528
Normal
0.2
958
Normal
0.2
617
Tumor
0.2
968
Normal
0.2
384
Normal
0.2
874
Normal
0.2
328
Normal
0.2
954
Normal
0.1
368
Normal
0.1
978
Normal
0.1
778
Normal
0.1
494
Normal
0.1
918
Normal
0.1
574
Normal
0.1
468
Normal
0.1
955
Tumor
0.1
434
Normal
0.1
571
Tumor
0.1
161
Tumor
0.0
745
Tumor
0.0
463
Tumor
0.0
423
Tumor
0.0
188
Normal
0.0
363
Tumor
0.0
852
Normal
0.0
113
Tumor
0.0
647
Tumor
0.0
558
Normal
-0.1
112
Tumor
-0.1
672
Normal
-0.1
984
Normal
-0.1
952
Normal
-0.1
227
Tumor
-0.1
477
Tumor
-0.1
284
Normal
-0.1
221
Tumor
-0.1
923
Tumor
-0.1
554
Normal
-0.1
392
Normal
-0.2
261
Tumor
-0.2
785
Tumor
-0.2
478
Normal
-0.2
125
Tumor
-0.2
431
Tumor
-0.2
515
Tumor
-0.2
224
Normal
-0.2
141
Tumor
-0.2
444
Normal
-0.3
192
Normal
-0.3
916
Normal
-0.3
145
Tumor
-0.3
627
Tumor
-0.3
867
Tumor
-0.3
777
Tumor
-0.3
1028
Normal
-0.3
435
Tumor
-0.4
217
Tumor
-0.4
741
Tumor
-0.4
411
Tumor
-0.4
487
Tumor
-0.4
341
Tumor
-0.4
268
Normal
-0.4
137
Tumor
-0.4
863
Tumor
-0.4
977
Tumor
-0.4
538
Normal
-0.4
857
Tumor
-0.5
981
Tumor
-0.5
498
Normal
-0.5
421
Tumor
-0.5
873
Tumor
-0.5
123
Tumor
-0.5
913
Tumor
-0.6
443
Tumor
-0.6
911
Tumor
-0.6
1043
Tumor
-0.6
493
Tumor
-0.6
465
Tumor
-0.6
1041
Tumor
-0.6
427
Tumor
-0.6
517
Tumor
-0.7
355
Tumor
-0.7
124
Normal
-0.7
865
Tumor
-0.7
563
Tumor
-0.8
191
Tumor
-0.8
1013
Tumor
-0.8
257
Tumor
-0.8
357
Tumor
-0.8
524
Normal
-0.8
327
Tumor
-0.8
492
Normal
-0.8
365
Tumor
-0.9
713
Tumor
-0.9
127
Tumor
-0.9
727
Tumor
-0.9
861
Tumor
-0.9
361
Tumor
-0.9
553
Tumor
-1.0
721
Tumor
-1.0
187
Tumor
-1.0
213
Tumor
-1.0
525
Tumor
-1.0
313
Tumor
-1.0
1027
Tumor
-1.0
963
Tumor
-1.0
375
Tumor
-1.0
223
Tumor
-1.1
755
Tumor
-1.1
135
Tumor
-1.1
665
Tumor
-1.1
185
Tumor
-1.1
957
Tumor
-1.1
537
Tumor
-1.1
925
Tumor
-1.1
445
Tumor
-1.2
877
Tumor
-1.2
473
Tumor
-1.2
823
Tumor
-1.2
883
Tumor
-1.2
471
Tumor
-1.2
953
Tumor
-1.2
391
Tumor
-1.2
917
Tumor
-1.3
814
Normal
-1.3
461
Tumor
-1.3
921
Tumor
-1.3
277
Tumor
-1.3
513
Tumor
-1.3
533
Tumor
-1.3
447
Tumor
-1.4
536
Normal
-1.4
413
Tumor
-1.4
383
Tumor
-1.4
367
Tumor
-1.4
387
Tumor
-1.4
171
Tumor
-1.4
641
Tumor
-1.4
455
Tumor
-1.5
195
Tumor
-1.5
915
Tumor
-1.5
567
Tumor
-1.5
851
Tumor
-1.6
483
Tumor
-1.6
297
Tumor
-1.6
147
Tumor
-1.6
975
Tumor
-1.7
497
Tumor
-1.7
425
Tumor
-1.7
943
Tumor
-1.7
1025
Tumor
-1.7
881
Tumor
-1.8
1015
Tumor
-1.8
311
Tumor
-1.8
737
Tumor
-1.8
671
Tumor
-1.8
231
Tumor
-1.8
1031
Tumor
-1.9
715
Tumor
-1.9
573
Tumor
-1.9
813
Tumor
-1.9
965
Tumor
-1.9
491
Tumor
-1.9
1021
Tumor
-1.9
343
Tumor
-1.9
393
Tumor
-2.0
351
Tumor
-2.0
285
Tumor
-2.0
527
Tumor
-2.1
635
Tumor
-2.1
817
Tumor
-2.1
467
Tumor
-2.1
331
Tumor
-2.1
451
Tumor
-2.1
697
Tumor
-2.1
283
Tumor
-2.2
271
Tumor
-2.2
815
Tumor
-2.2
951
Tumor
-2.2
937
Tumor
-2.2
983
Tumor
-2.2
395
Tumor
-2.2
131
Tumor
-2.3
661
Tumor
-2.3
967
Tumor
-2.4
535
Tumor
-2.4
557
Tumor
-2.4
545
Tumor
-2.4
724
Normal
-2.4
211
Tumor
-2.5
685
Tumor
-2.5
523
Tumor
-2.5
385
Tumor
-2.7
743
Tumor
-2.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.