HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:42.8 nTPM
HPA Brain:28.7 nTPM
GTEx:42.8 nTPM
FANTOM5:41.7 Scaled Tags Per Million
Pig:25.7 nTPM
Mouse:11.3 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 28.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.8
2148 Female, age 91, left hemisphere 28.7
2529 Female, age 94, left hemisphere 28.1
1898 Male, age 80, left hemisphere 27.8
2621 Female, age 67, right hemisphere 26.4
1855 Male, age 76, left hemisphere 25.1
1911 Female, age 85, right hemisphere 24.4
Dentate gyrus
nTPM: 27.9
1927 Female, age 91, both hemispheres 30.5
2530 Female, age 94, left hemisphere 29.6
2531 Female, age 67, both hemispheres 29.1
2246 Female, age 85, both hemispheres 27.0
2528 Male, age 74, both hemispheres 26.0
2010 Male, age 76, both hemispheres 25.4
Entorhinal gyrus
nTPM: 28.7
2764 Male, age 80, right hemisphere 31.3
2686 Male, age 75, right hemisphere 30.7
1787 Male, age 76, left hemisphere 28.2
2613 Female, age 94, left hemisphere 28.2
2117 Female, age 91, right hemisphere 27.7
1938 Female, age 85, left hemisphere 26.3
Hippocampus, CA1
nTPM: 26.6
2749 Male, age 80, left hemisphere 33.4
1873 Female, age 85, both hemispheres 26.9
2082 Female, age 91, right hemisphere 25.5
2527 Male, age 74, both hemispheres 24.0
2045 Male, age 76, both hemispheres 23.4
Hippocampus, CA2
nTPM: 27.0
1963 Male, age 80, left hemisphere 32.1
1892 Male, age 76, both hemispheres 28.1
2113 Female, age 91, right hemisphere 26.6
2437 Female, age 94, left hemisphere 26.0
1940 Female, age 85, left hemisphere 25.8
2249 Male, age 74, both hemispheres 23.6
Hippocampus, CA3
nTPM: 27.6
2620 Female, age 94, left hemisphere 31.2
2861 Female, age 67, both hemispheres 30.3
2137 Male, age 80, left hemisphere 28.6
1867 Male, age 76, both hemispheres 26.1
1891 Female, age 85, both hemispheres 25.8
2436 Male, age 74, both hemispheres 23.8
Parahippocampal cortex
nTPM: 27.4
2622 Female, age 67, right hemisphere 30.6
1850 Male, age 80, both hemispheres 30.0
2692 Male, age 74, both hemispheres 29.2
1990 Female, age 91, right hemisphere 27.8
2245 Female, age 91, both hemispheres 27.6
2693 Female, age 94, both hemispheres 26.4
1933 Female, age 85, both hemispheres 26.1
2250 Female, age 67, right hemisphere 26.0
2532 Female, age 72, left hemisphere 25.8
2018 Male, age 76, both hemispheres 24.7
Perirhinal gyrus
nTPM: 28.2
1794 Male, age 80, right hemisphere 30.1
2848 Male, age 76, right hemisphere 28.5
1841 Female, age 85, right hemisphere 27.9
1847 Female, age 91, left hemisphere 27.5
2521 Female, age 94, right hemisphere 27.0
Subiculum
nTPM: 25.4
2438 Female, age 94, left hemisphere 29.2
2729 Female, age 91, right hemisphere 27.3
1977 Female, age 85, both hemispheres 27.1
1901 Male, age 80, both hemispheres 24.4
2619 Male, age 74, both hemispheres 23.3
2042 Male, age 76, both hemispheres 21.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 42.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.8
Samples: 197

Max nTPM: 87.8
Min nTPM: 15.1
Std nTPM: 9.6
Median nTPM: 41.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 87.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 76.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 66.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 64.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 64.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 63.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 63.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 62.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 61.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 60.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 59.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 41.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.7
FF:10169-103B7 60 years, female 46.7
FF:10153-102I9 76 years, female 36.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 25.7
Pig sample Sample description nTPM
Subiculum
nTPM: 24.9
Samples: 4

Max nTPM: 27.5
Min nTPM: 22.8
Sample A Female 27.5
Sample B Female 23.9
Sample C Male 25.2
Sample D Male 22.8
Dorsal hippocampus
nTPM: 25.4
Samples: 4

Max nTPM: 27.5
Min nTPM: 22.5
Sample A Female 27.5
Sample B Female 27.4
Sample C Male 24.1
Sample D Male 22.5
Entorhinal cortex
nTPM: 25.8
Samples: 4

Max nTPM: 27.7
Min nTPM: 22.8
Sample A Female 27.7
Sample B Female 25.9
Sample C Male 26.6
Sample D Male 22.8
Ventral hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 30.5
Min nTPM: 21.7
Sample A Female 25.4
Sample B Female 21.7
Sample C Male 30.5
Sample D Male 24.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 11.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 14.8
Min nTPM: 9.4
Sample A Male 9.4
Sample B Male 9.6
Sample C Female 14.8
Sample D Female 11.3
Hippocampal formation
nTPM: 10.8
Samples: 4

Max nTPM: 13.0
Min nTPM: 8.6
Sample A Male 11.1
Sample B Male 13.0
Sample C Female 8.6
Sample D Female 10.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
70303803 Antisense, RP_050609_02_E09, Mouse strain C57BL/6J (56 days, male) 2.0

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