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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
49.4
nTPM
HPA Brain:
31.1
nTPM
GTEx:
49.4
nTPM
FANTOM5:
51.4
Scaled Tags Per Million
Pig:
23.9
nTPM
Mouse:
14.0
nTPM
Allen mouse:
1.4
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
31.1
Sample id
Sample description
nTPM
Amygdala nTPM: 29.0
2695
Female, age 67, right hemisphere
31.4
2814
Male, age 76, right hemisphere
30.7
2514
Male, age 75, right hemisphere
28.8
2517
Female, age 94, left hemisphere
28.1
1987
Female, age 91, left hemisphere
26.3
Basal amygdala nTPM: 29.4
2827
Female, age 67, right hemisphere
35.9
2609
Male, age 75, right hemisphere
29.8
2243
Female, age 91, right hemisphere
28.9
2685
Female, age 94, left hemisphere
28.0
1955
Male, age 76, both hemispheres
27.0
2110
Male, age 80, left hemisphere
26.9
Central amygdala nTPM: 30.6
2826
Female, age 94, left hemisphere
33.8
2515
Male, age 75, right hemisphere
31.7
1905
Male, age 76, both hemispheres
31.2
2701
Female, age 91, right hemisphere
29.4
2239
Male, age 80, left hemisphere
26.8
Corticomedial amygdala nTPM: 28.6
2535
Female, age 67, right hemisphere
31.8
2428
Male, age 75, right hemisphere
30.8
2240
Male, age 76, both hemispheres
28.5
2429
Female, age 94, left hemisphere
27.9
2829
Male, age 80, left hemisphere
26.6
2242
Female, age 91, right hemisphere
26.2
Lateral amygdala nTPM: 31.1
2830
Female, age 67, right hemisphere
40.3
2534
Female, age 94, left hemisphere
31.0
2516
Male, age 75, right hemisphere
30.7
2255
Female, age 91, right hemisphere
29.3
1883
Male, age 76, both hemispheres
28.4
2256
Male, age 80, left hemisphere
27.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
49.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 49.4
Samples: 152
Max nTPM: 128.4
Min nTPM: 12.5
Std nTPM: 12.5
Median nTPM: 48.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
128.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
81.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
78.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
74.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
69.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
69.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
67.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
67.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
67.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
67.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
66.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
65.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
65.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
64.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
64.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
64.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
63.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
63.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
62.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
62.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
62.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
61.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
60.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
60.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
60.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
60.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
59.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
59.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
58.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
57.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
57.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
57.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
57.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
56.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
56.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
56.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
56.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
56.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
55.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
55.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
55.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
55.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
55.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
54.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
54.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
54.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
53.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
53.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
53.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
53.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
53.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
53.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
53.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
52.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
52.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
52.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
52.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
52.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
51.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
51.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
51.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
51.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
50.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
50.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
49.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
49.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
49.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
49.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
49.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
49.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
49.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
48.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
48.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
48.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
48.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
48.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
48.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
47.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
47.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
47.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
46.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
46.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
46.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
46.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
46.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
46.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
46.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
46.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
45.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
45.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
45.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
45.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
45.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
45.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
45.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
44.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
44.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
44.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
44.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
44.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
44.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
44.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
43.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
43.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
43.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
43.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
43.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
43.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
43.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
43.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
43.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
42.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
42.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
42.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
42.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
41.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
41.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
41.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
40.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
40.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
40.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
40.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
40.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
40.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
39.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
39.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
39.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
38.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
37.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
37.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
37.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
37.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
36.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
36.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
36.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
35.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
35.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
35.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
35.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
35.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
35.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
34.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
34.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
32.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
32.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
31.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
31.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
30.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
29.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
29.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
28.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
12.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
14.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 14.0
Samples: 4
Max nTPM: 16.3
Min nTPM: 9.6
Sample A
Male
9.6
Sample B
Male
16.3
Sample C
Female
15.6
Sample D
Female
14.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
