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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ATP5MF is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
976.6
Number of samples
349
Samples
Sample
Description
TPM
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
3466.3
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
2593.6
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
2530.2
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
2530.1
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
2462.2
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
2435.9
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
2366.7
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
2351.4
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
2281.2
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
2224.3
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
2166.1
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
2152.6
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
2056.6
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
2035.7
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
1921.6
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
1907.7
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
1883.4
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1858.7
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
1833.6
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
1756.7
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1744.3
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
1736.4
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
1712.1
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1696.6
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1690.2
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
1676.9
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
1664.1
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
1657.7
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1651.6
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
1609.0
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
1603.1
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
1595.3
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
1594.1
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
1575.9
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
1562.4
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1561.6
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
1543.9
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
1533.5
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
1530.6
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1511.4
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
1496.2
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1492.5
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
1489.8
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
1488.6
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
1471.2
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
1458.7
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1442.0
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
1421.9
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
1421.1
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
1418.7
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1417.2
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1404.0
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
1390.0
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1389.1
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1372.5
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
1372.5
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
1367.9
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
1364.7
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
1363.2
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
1362.0
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
1353.1
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
1341.2
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
1340.4
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1334.1
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
1332.5
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1312.2
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1290.5
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
1273.8
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1270.2
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
1267.0
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
1265.2
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
1264.7
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
1258.9
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1258.8
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
1251.9
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
1248.9
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
1248.6
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
1239.4
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1237.8
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1233.6
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
1233.3
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
1226.9
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1194.6
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1192.4
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
1190.2
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
1189.2
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
1183.3
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
1177.1
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1165.4
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
1164.6
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1164.4
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
1161.3
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
1159.3
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1148.0
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
1147.0
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
1144.0
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1141.6
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
1138.9
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
1138.3
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
1131.4
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
1130.5
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
1117.8
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
1109.2
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
1107.5
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
1105.2
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
1103.2
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
1099.7
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
1098.2
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
1094.1
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
1092.0
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1091.0
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
1090.7
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1088.0
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
1083.6
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1079.9
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
1070.3
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
1068.4
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
1062.1
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
1053.9
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
1052.5
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1049.7
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
1049.6
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
1041.7
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
1041.1
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
1041.0
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
1029.8
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1028.5
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
1025.6
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1024.7
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
1024.6
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
1024.5
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
1019.9
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
1017.8
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
1015.9
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
1015.3
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
1014.7
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1013.3
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
1007.6
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
1006.8
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
1004.6
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
1004.1
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
999.5
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
990.2
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
989.3
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
988.4
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
983.0
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
977.8
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
976.9
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
971.2
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
971.1
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
970.9
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
969.5
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
963.0
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
958.7
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
951.5
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
951.0
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
949.9
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
948.0
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
938.3
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
927.5
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
924.9
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
919.3
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
919.1
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
909.7
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
905.5
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
903.3
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
901.3
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
897.3
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
895.5
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
893.4
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
890.7
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
888.3
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
880.3
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
879.2
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
874.3
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
872.2
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
871.3
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
866.3
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
865.9
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
863.5
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
862.4
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
862.1
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
862.0
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
853.5
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
849.4
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
848.2
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
842.2
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
842.2
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
842.1
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
839.6
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
839.4
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
839.2
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
837.8
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
836.8
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
836.6
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
836.2
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
836.2
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
835.7
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
835.7
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
833.6
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
831.5
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
821.7
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
814.5
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
813.4
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
809.8
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
809.7
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
809.6
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
809.2
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
808.9
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
808.7
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
805.8
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
799.9
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
799.0
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
797.3
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
797.3
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
776.3
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
771.4
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
752.6
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
751.4
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
751.0
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
749.6
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
743.6
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
743.0
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
742.2
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
737.3
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
736.8
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
735.9
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
734.4
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
732.7
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
725.2
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
722.3
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
722.1
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
721.3
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
719.0
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
719.0
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
715.8
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
715.7
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
713.9
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
713.3
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
709.6
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
707.6
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
707.0
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
705.3
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
705.1
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
703.6
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
702.8
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
701.1
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
697.4
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
692.9
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
692.5
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
691.4
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
686.5
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
685.3
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
674.9
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
672.0
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
671.6
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
671.0
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
669.2
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
668.7
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
666.6
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
665.2
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
659.2
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
658.3
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
657.9
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
654.8
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
651.8
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
649.5
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
639.9
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
633.8
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
624.5
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
624.4
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
624.3
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
623.4
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
615.8
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
608.2
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
604.4
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
602.3
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
601.0
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
599.9
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
592.9
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
590.7
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
589.3
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
588.3
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
586.0
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
583.1
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
583.1
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
581.3
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
580.0
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
575.0
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
574.5
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
573.7
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
567.9
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
567.3
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
565.8
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
556.4
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
555.8
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
551.8
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
546.0
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
544.6
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
543.6
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
543.4
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
542.0
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
531.2
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
527.7
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
524.4
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
521.1
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
518.0
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
515.0
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
514.4
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
513.5
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
513.2
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
507.2
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
503.7
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
503.4
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
500.3
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
498.2
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
494.9
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
493.8
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
492.8
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
491.8
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
490.6
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
484.3
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
482.8
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
480.5
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
479.3
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
475.9
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
466.2
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
454.3
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
453.9
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
440.5
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
439.5
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
438.6
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
436.0
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
424.3
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
396.5
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
390.1
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
376.7
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
372.2
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
364.3
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
361.8
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
359.1
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
334.6
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
334.2
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
308.1
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
278.7
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
273.5
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
273.2
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
259.7
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ATP5MF is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
519.7
Number of samples
81
Samples
Sample
Description
TPM
DO46333
0 years, female, NA, stage:III, dead, 359 days
1981.1
DO46576
0 years, female, NA, stage:III, alive, 133 days
1302.2
DO46390
0 years, female, NA, stage:III, dead, 374 days
1200.3
DO46581
0 years, female, NA, stage:III, dead, 408 days
1060.4
DO46538
0 years, female, NA, stage:III, dead, 1527 days
1025.2
DO46342
0 years, female, NA, stage:III, dead, 1398 days
927.6
DO46372
0 years, female, NA, stage:III, dead, 1326 days
919.9
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
884.2
DO46368
0 years, female, NA, stage:III, dead, 2879 days
796.3
DO46329
0 years, female, NA, stage:III, dead, 1699 days
758.3
DO46586
0 years, female, NA, stage:III, dead, 1019 days
724.0
DO46350
0 years, female, NA, stage:III, dead, 886 days
718.1
DO46331
0 years, female, NA, stage:III, dead, 612 days
677.1
DO46376
0 years, female, NA, stage:III, dead, 1430 days
667.5
DO46551
0 years, female, NA, stage:III, dead, 1055 days
646.7
DO46463
0 years, female, NA, stage:III, dead, 2451 days
638.5
DO46591
0 years, female, NA, stage:III, dead, 195 days
629.4
DO46382
0 years, female, NA, stage:IV, dead, 311 days
626.7
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
620.8
DO46404
0 years, female, NA, stage:III, dead, 690 days
617.7
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
604.1
DO46366
0 years, female, NA, stage:III, dead, 2054 days
600.0
DO46352
0 years, female, NA, stage:III, dead, 677 days
585.5
DO46330
0 years, female, NA, stage:III, dead, 684 days
573.7
DO46448
0 years, female, NA, stage:III, dead, 654 days
572.5
DO46432
0 years, female, NA, stage:III, alive, 2218 days
564.1
DO46392
0 years, female, NA, stage:III, dead, 628 days
558.0
DO46370
0 years, female, NA, stage:III, dead, 1727 days
555.7
DO46493
0 years, female, NA, stage:IV, alive, 839 days
537.7
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
535.9
DO46388
0 years, female, NA, stage:III, dead, 413 days
535.2
DO46356
0 years, female, NA, stage:III, dead, 911 days
533.8
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
521.8
DO46354
0 years, female, NA, stage:III, dead, 843 days
517.8
DO46560
0 years, female, NA, stage:IV, dead, 286 days
489.8
DO46568
0 years, female, NA, stage:III, dead, 320 days
487.0
DO46468
0 years, female, NA, stage:III, alive, 2776 days
482.3
DO46328
0 years, female, NA, stage:III, dead, 972 days
478.7
DO46400
0 years, female, NA, stage:III, dead, 719 days
477.3
DO46602
0 years, female, NA, stage:III, dead, 205 days
474.6
DO46364
0 years, female, NA, stage:III, dead, 806 days
474.0
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
472.6
DO46566
0 years, female, NA, stage:III, dead, 673 days
464.4
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
450.3
DO46348
0 years, female, NA, stage:IV, dead, 287 days
440.9
DO46325
0 years, female, NA, stage:III, dead, 477 days
434.0
DO46374
0 years, female, NA, stage:III, dead, 1409 days
428.9
DO46380
0 years, female, NA, stage:III, dead, 1423 days
425.1
DO46453
0 years, female, NA, stage:III, dead, 3294 days
424.2
DO46533
0 years, female, NA, stage:III, alive, 3667 days
424.1
DO46561
0 years, female, NA, stage:III, dead, 195 days
422.9
DO46408
0 years, female, NA, stage:III, dead, 489 days
414.8
DO46332
0 years, female, NA, stage:III, dead, 689 days
402.7
DO46362
0 years, female, NA, stage:III, dead, 1639 days
398.4
DO46546
0 years, female, NA, stage:III, dead, 1889 days
396.0
DO46340
0 years, female, NA, stage:III, dead, 616 days
349.4
DO46508
0 years, female, NA, stage:III, dead, 2101 days
343.4
DO46412
0 years, female, NA, stage:III, dead, 597 days
340.1
DO46358
0 years, female, NA, stage:III, dead, 423 days
338.6
DO46346
0 years, female, NA, stage:III, dead, 1187 days
334.2
DO46443
0 years, female, NA, stage:III, dead, 2464 days
331.5
DO46327
0 years, female, NA, stage:III, dead, 184 days
324.7
DO46336
0 years, female, NA, stage:IV, dead, 664 days
324.0
DO46334
0 years, female, NA, stage:III, dead, 496 days
322.1
DO46402
0 years, female, NA, stage:III, dead, 511 days
317.5
DO46606
0 years, female, NA, stage:III, alive, 804 days
317.3
DO46378
0 years, female, NA, stage:III, alive, 843 days
310.6
DO46611
0 years, female, NA, stage:III, dead, 734 days
302.4
DO46528
0 years, female, NA, stage:III, alive, 6139 days
293.0
DO46588
0 years, female, NA, stage:III, dead, 438 days
287.4
DO46597
0 years, female, NA, stage:III, dead, 393 days
286.5
DO46384
0 years, female, NA, stage:III, dead, 614 days
275.7
DO46436
0 years, female, NA, stage:III, alive, 3193 days
273.7
DO46344
0 years, female, NA, stage:III, dead, 642 days
270.7
DO46571
0 years, female, NA, stage:III, dead, 243 days
262.5
DO46518
0 years, female, NA, stage:III, alive, 2960 days
255.2
DO46396
0 years, female, NA, stage:III, dead, 583 days
229.2
DO46338
0 years, female, NA, stage:III, dead, 596 days
225.5
DO46386
0 years, female, NA, stage:III, dead, 1162 days
223.2
DO46398
0 years, female, NA, stage:III, alive, 437 days
216.5
DO46326
0 years, female, NA, stage:III, dead, 701 days
165.1
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
N/A
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
N/A
21efd60f-6a31-4b98-9477-16a905_D2
Normal
N/A
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
N/A
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
N/A
285fed94-1495-448e-879b-b55de9_D2
Tumor
N/A
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
N/A
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
N/A
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
N/A
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
N/A
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
N/A
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
N/A
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
N/A
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
N/A
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
N/A
2f901c90-617e-46da-9fac-d68369_D2
Tumor
N/A
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
N/A
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
N/A
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
N/A
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
N/A
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
N/A
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
N/A
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
N/A
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
N/A
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
N/A
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
N/A
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
N/A
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
N/A
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
N/A
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
N/A
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
N/A
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
N/A
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
N/A
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
N/A
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
N/A
1772e913-f62e-446a-8cf3-720348_D2
Tumor
N/A
e9d416e7-f661-400a-896e-388545_D2
Tumor
N/A
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
N/A
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
N/A
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
N/A
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
N/A
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
N/A
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
N/A
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
N/A
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
N/A
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
N/A
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
N/A
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
N/A
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
N/A
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
N/A
10c2d629-0287-4511-ac25-f29031_D2
Tumor
N/A
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
N/A
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
N/A
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
N/A
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
N/A
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
N/A
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
N/A
340a3769-3031-41ae-bb08-a2f696_D2
Normal
N/A
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
N/A
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
N/A
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
N/A
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
N/A
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
N/A
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
N/A
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
N/A
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
N/A
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
N/A
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
N/A
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
N/A
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
N/A
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
N/A
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
N/A
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
N/A
15524912-685a-47ce-a824-567848_D2
Tumor
N/A
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
N/A
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
N/A
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
N/A
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
N/A
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
N/A
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
N/A
a3a26070-fb84-406a-8280-d555e6_D2
Normal
N/A
161317f3-1a39-438e-af45-cd2502_D2
Tumor
N/A
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
N/A
1db5574d-aca7-403c-8100-6e705f_D2
Normal
N/A
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
N/A
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
N/A
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
N/A
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
N/A
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
N/A
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
N/A
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
N/A
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
N/A
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
N/A
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
N/A
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
N/A
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
N/A
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
N/A
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
N/A
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
N/A
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
N/A
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
N/A
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
N/A
a65d8e76-640f-4341-a561-afbb57_D2
Normal
N/A
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
N/A
1a10c200-3895-4648-b951-94f99f_D2
Tumor
N/A
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
N/A
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
N/A
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
N/A
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.