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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MIF is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2343.1
Number of samples
349
Samples
Sample
Description
TPM
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
12724.7
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
10244.2
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
7905.6
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
6963.4
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
6576.3
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
6136.2
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
6108.2
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
5901.3
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
5893.6
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
5532.0
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
5430.4
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
5411.4
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
5334.8
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
5251.7
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
4977.0
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
4847.7
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
4810.6
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
4633.2
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
4590.0
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
4587.7
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
4455.8
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
4382.0
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
4367.2
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
4366.5
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
4348.5
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
4335.4
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
4273.2
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
4179.5
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
4140.7
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
4118.9
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
4068.7
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
4061.0
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
4053.4
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
3949.2
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
3863.7
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
3855.9
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
3846.5
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
3841.2
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
3828.8
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
3827.2
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
3772.4
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
3678.9
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
3670.7
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
3622.9
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
3599.9
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
3564.8
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
3561.5
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
3554.8
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
3552.5
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
3529.0
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
3507.8
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
3505.0
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
3477.1
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
3474.2
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
3457.9
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
3434.8
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
3409.2
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
3341.1
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
3327.4
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
3264.8
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
3247.6
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
3224.4
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
3222.8
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
3169.4
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
3168.2
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
3155.9
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
3154.7
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
3151.5
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
3138.0
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
3132.1
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
3103.8
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
3093.3
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
3092.4
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
3084.2
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
3074.4
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
3060.4
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
3045.0
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
3014.7
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
3004.9
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
2974.9
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
2949.5
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
2923.0
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
2898.4
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
2883.6
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
2881.9
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
2875.6
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
2859.9
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
2851.6
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
2831.0
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
2824.6
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
2824.2
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
2807.1
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
2801.3
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
2799.5
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
2759.3
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
2750.4
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
2744.5
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
2715.8
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
2690.8
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
2689.3
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
2681.9
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
2665.8
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
2638.4
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
2636.9
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
2635.4
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
2632.8
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
2613.6
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
2612.2
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
2609.9
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
2596.0
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
2552.9
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
2551.1
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
2539.2
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
2533.3
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
2529.1
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
2513.7
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
2513.1
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
2504.8
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
2472.9
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
2468.9
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
2442.8
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
2421.8
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
2415.4
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
2413.7
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
2398.7
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
2392.6
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
2392.3
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
2386.8
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2385.2
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
2381.4
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
2378.3
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
2368.1
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
2349.3
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
2348.1
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
2345.9
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2344.6
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2338.4
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
2337.1
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
2306.6
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
2298.9
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
2291.4
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
2289.2
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
2288.8
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
2270.9
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
2265.0
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
2261.5
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
2259.2
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
2254.9
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
2252.6
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
2251.1
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
2248.3
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
2226.4
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
2214.9
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
2212.9
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
2204.6
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
2204.1
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
2201.4
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
2197.9
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
2191.0
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
2154.0
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
2137.5
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2137.3
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
2103.4
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
2091.7
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
2090.4
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
2084.7
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
2081.5
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
2078.4
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
2076.6
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
2072.5
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
2070.7
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
2057.5
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
2053.4
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
2051.8
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
2042.4
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
2037.5
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
2024.4
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
2012.0
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
2006.8
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1999.0
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
1965.8
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
1963.9
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
1958.4
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
1950.2
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
1948.4
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
1943.3
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1936.0
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1902.7
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1885.0
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1883.3
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
1876.7
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1871.4
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
1858.9
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
1855.1
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
1851.6
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
1832.2
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
1827.5
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
1824.7
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1822.1
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1821.2
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1820.2
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
1818.0
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1816.0
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
1813.5
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
1803.7
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1800.6
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
1792.8
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
1786.3
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
1780.6
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
1779.4
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1779.0
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
1773.6
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
1772.0
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
1758.8
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
1758.0
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
1749.9
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
1746.2
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
1745.7
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1735.7
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
1734.6
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1730.7
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1730.3
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
1718.6
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
1700.9
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
1690.5
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1677.5
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1670.4
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
1659.8
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
1659.8
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
1654.0
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
1630.1
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
1628.9
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
1616.8
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
1610.9
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
1604.8
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
1602.3
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
1598.4
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
1593.7
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
1580.0
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1574.4
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
1563.5
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
1562.4
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
1555.5
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
1554.8
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
1554.6
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
1514.5
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
1505.2
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
1501.1
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
1499.7
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
1492.3
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
1490.2
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1474.0
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1473.1
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
1466.2
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
1449.6
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
1445.7
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
1438.5
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
1438.4
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
1435.0
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1424.6
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1407.5
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
1406.6
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1389.9
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
1383.2
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
1380.2
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
1376.3
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
1363.5
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1362.3
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
1361.1
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
1361.0
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
1360.2
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
1358.1
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
1355.7
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1348.1
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
1338.7
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
1338.7
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
1333.0
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
1330.0
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1323.1
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
1308.6
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
1307.5
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
1306.0
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
1301.4
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
1294.4
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
1291.7
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
1279.2
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
1277.4
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
1275.3
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
1270.7
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
1268.3
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
1255.5
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
1230.4
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
1227.5
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
1224.7
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1220.3
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1220.1
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
1218.0
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
1214.9
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
1213.4
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
1210.2
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
1205.4
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
1198.8
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
1191.3
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
1188.7
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1183.4
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
1173.3
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
1170.7
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
1169.3
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
1162.4
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1156.1
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
1155.1
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
1145.4
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
1139.4
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
1137.1
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1093.2
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
1090.8
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
1056.1
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
1049.6
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
1049.6
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1044.7
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
1038.6
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
1029.7
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
1029.2
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
1024.2
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
1012.3
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1005.8
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1003.3
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
1000.1
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
990.7
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
988.6
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
986.6
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
982.9
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
976.5
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
965.1
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
941.3
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
939.8
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
932.3
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
927.9
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
912.5
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
876.3
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
858.9
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
839.9
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
837.6
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
821.7
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
820.5
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
797.9
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
754.9
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
747.8
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MIF is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
523.6
Number of samples
81
Samples
Sample
Description
TPM
DO46611
0 years, female, NA, stage:III, dead, 734 days
2472.6
DO46448
0 years, female, NA, stage:III, dead, 654 days
1255.9
DO46551
0 years, female, NA, stage:III, dead, 1055 days
1042.7
DO46538
0 years, female, NA, stage:III, dead, 1527 days
1009.0
DO46453
0 years, female, NA, stage:III, dead, 3294 days
1009.0
DO46331
0 years, female, NA, stage:III, dead, 612 days
979.0
DO46333
0 years, female, NA, stage:III, dead, 359 days
970.1
DO46329
0 years, female, NA, stage:III, dead, 1699 days
944.8
DO46366
0 years, female, NA, stage:III, dead, 2054 days
924.7
DO46372
0 years, female, NA, stage:III, dead, 1326 days
903.1
DO46342
0 years, female, NA, stage:III, dead, 1398 days
850.1
DO46356
0 years, female, NA, stage:III, dead, 911 days
785.6
DO46368
0 years, female, NA, stage:III, dead, 2879 days
767.9
DO46591
0 years, female, NA, stage:III, dead, 195 days
745.2
DO46376
0 years, female, NA, stage:III, dead, 1430 days
705.6
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
687.1
DO46576
0 years, female, NA, stage:III, alive, 133 days
682.8
DO46330
0 years, female, NA, stage:III, dead, 684 days
680.3
DO46581
0 years, female, NA, stage:III, dead, 408 days
648.5
DO46402
0 years, female, NA, stage:III, dead, 511 days
642.3
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
626.7
DO46380
0 years, female, NA, stage:III, dead, 1423 days
626.3
DO46493
0 years, female, NA, stage:IV, alive, 839 days
570.1
DO46508
0 years, female, NA, stage:III, dead, 2101 days
569.4
DO46412
0 years, female, NA, stage:III, dead, 597 days
554.6
DO46350
0 years, female, NA, stage:III, dead, 886 days
548.7
DO46528
0 years, female, NA, stage:III, alive, 6139 days
547.6
DO46327
0 years, female, NA, stage:III, dead, 184 days
543.1
DO46370
0 years, female, NA, stage:III, dead, 1727 days
541.0
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
540.1
DO46468
0 years, female, NA, stage:III, alive, 2776 days
539.0
DO46354
0 years, female, NA, stage:III, dead, 843 days
537.9
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
521.9
DO46546
0 years, female, NA, stage:III, dead, 1889 days
516.8
DO46390
0 years, female, NA, stage:III, dead, 374 days
507.3
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
494.8
DO46358
0 years, female, NA, stage:III, dead, 423 days
470.4
DO46392
0 years, female, NA, stage:III, dead, 628 days
460.4
DO46588
0 years, female, NA, stage:III, dead, 438 days
439.1
DO46374
0 years, female, NA, stage:III, dead, 1409 days
438.2
DO46332
0 years, female, NA, stage:III, dead, 689 days
438.0
DO46400
0 years, female, NA, stage:III, dead, 719 days
435.5
DO46362
0 years, female, NA, stage:III, dead, 1639 days
425.1
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
399.9
DO46344
0 years, female, NA, stage:III, dead, 642 days
398.8
DO46352
0 years, female, NA, stage:III, dead, 677 days
393.6
DO46348
0 years, female, NA, stage:IV, dead, 287 days
391.8
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
389.1
DO46443
0 years, female, NA, stage:III, dead, 2464 days
388.4
DO46382
0 years, female, NA, stage:IV, dead, 311 days
385.9
DO46463
0 years, female, NA, stage:III, dead, 2451 days
377.6
DO46328
0 years, female, NA, stage:III, dead, 972 days
377.0
DO46561
0 years, female, NA, stage:III, dead, 195 days
376.6
DO46560
0 years, female, NA, stage:IV, dead, 286 days
363.3
DO46388
0 years, female, NA, stage:III, dead, 413 days
362.6
DO46568
0 years, female, NA, stage:III, dead, 320 days
356.1
DO46533
0 years, female, NA, stage:III, alive, 3667 days
353.7
DO46325
0 years, female, NA, stage:III, dead, 477 days
349.3
DO46334
0 years, female, NA, stage:III, dead, 496 days
347.9
DO46378
0 years, female, NA, stage:III, alive, 843 days
347.2
DO46336
0 years, female, NA, stage:IV, dead, 664 days
342.9
DO46326
0 years, female, NA, stage:III, dead, 701 days
339.0
DO46566
0 years, female, NA, stage:III, dead, 673 days
327.5
DO46571
0 years, female, NA, stage:III, dead, 243 days
318.2
DO46518
0 years, female, NA, stage:III, alive, 2960 days
312.4
DO46606
0 years, female, NA, stage:III, alive, 804 days
302.0
DO46432
0 years, female, NA, stage:III, alive, 2218 days
300.6
DO46586
0 years, female, NA, stage:III, dead, 1019 days
287.8
DO46364
0 years, female, NA, stage:III, dead, 806 days
286.5
DO46338
0 years, female, NA, stage:III, dead, 596 days
285.0
DO46408
0 years, female, NA, stage:III, dead, 489 days
279.4
DO46597
0 years, female, NA, stage:III, dead, 393 days
271.7
DO46398
0 years, female, NA, stage:III, alive, 437 days
271.2
DO46436
0 years, female, NA, stage:III, alive, 3193 days
249.0
DO46386
0 years, female, NA, stage:III, dead, 1162 days
228.4
DO46346
0 years, female, NA, stage:III, dead, 1187 days
228.1
DO46404
0 years, female, NA, stage:III, dead, 690 days
225.8
DO46340
0 years, female, NA, stage:III, dead, 616 days
204.2
DO46384
0 years, female, NA, stage:III, dead, 614 days
145.6
DO46396
0 years, female, NA, stage:III, dead, 583 days
129.6
DO46602
0 years, female, NA, stage:III, dead, 205 days
125.8
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
1.6
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
1.5
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
1.4
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
1.3
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
1.3
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
1.2
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
1.2
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
1.1
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
1.0
2f901c90-617e-46da-9fac-d68369_D2
Tumor
1.0
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
1.0
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.9
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.9
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.9
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.9
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.8
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.8
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.8
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.8
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.7
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.7
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.7
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.7
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.7
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.6
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.6
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.6
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.6
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.6
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.6
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.6
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.6
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.6
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.6
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.5
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.5
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.5
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.5
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.5
15524912-685a-47ce-a824-567848_D2
Tumor
0.5
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.5
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.5
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.5
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.5
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.4
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.4
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.4
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.4
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.4
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
0.3
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.3
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.3
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.3
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.3
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.3
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.2
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.2
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.2
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
0.2
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
0.2
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.2
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.2
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.2
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.2
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.2
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.2
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.1
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.1
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.1
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.1
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
0.1
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.1
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.1
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.1
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
0.1
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
0.1
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.1
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.0
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
0.0
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.0
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.0
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.0
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.0
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.0
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.1
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.1
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.1
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-0.1
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.2
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.2
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.2
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.2
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.2
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.3
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.3
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.3
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.3
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.3
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.3
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.4
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.4
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.4
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.5
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.5
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.5
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.5
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.6
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-1.0
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
