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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MIF is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
807.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4124.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3408.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
3319.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3167.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2926.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2587.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2451.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
2386.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
2371.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
2360.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2298.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
2280.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2241.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2236.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
2098.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2048.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2029.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2015.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2014.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1924.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1891.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
1852.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1840.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1813.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1797.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1763.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
1735.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1681.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1657.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1653.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1653.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1650.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1615.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1611.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1520.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1520.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
1512.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1484.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1455.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1444.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
1439.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1407.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
1404.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1384.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1357.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1356.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1354.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
1344.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1342.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
1329.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
1324.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1320.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
1288.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
1286.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1285.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1279.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1271.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
1269.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1252.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1230.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1227.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1220.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1220.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1216.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1209.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1204.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1202.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1184.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1165.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1143.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
1138.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1132.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
1126.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1123.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1104.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
1102.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1100.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1095.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1094.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1083.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1078.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1074.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1059.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1059.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1058.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1046.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1045.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1030.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1029.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
1022.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1001.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1000.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
999.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
995.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
982.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
976.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
966.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
962.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
960.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
959.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
954.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
942.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
924.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
922.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
918.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
917.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
911.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
906.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
900.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
893.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
891.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
889.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
888.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
888.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
886.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
885.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
885.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
874.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
854.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
845.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
844.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
841.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
841.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
839.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
837.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
828.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
822.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
819.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
815.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
813.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
811.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
810.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
805.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
796.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
795.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
791.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
782.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
780.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
779.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
778.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
772.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
767.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
764.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
761.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
760.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
760.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
756.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
756.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
752.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
748.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
738.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
732.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
732.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
731.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
728.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
728.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
728.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
728.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
726.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
723.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
720.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
720.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
719.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
713.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
712.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
710.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
705.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
705.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
703.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
703.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
699.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
698.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
695.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
692.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
692.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
686.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
684.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
683.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
682.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
679.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
676.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
673.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
672.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
667.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
666.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
664.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
662.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
661.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
656.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
655.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
648.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
647.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
646.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
644.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
641.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
640.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
632.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
630.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
629.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
626.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
623.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
613.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
612.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
609.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
609.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
603.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
602.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
598.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
597.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
596.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
593.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
593.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
591.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
586.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
581.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
579.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
578.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
569.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
563.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
562.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
560.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
558.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
556.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
555.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
555.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
549.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
548.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
547.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
539.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
530.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
528.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
526.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
524.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
523.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
522.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
521.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
521.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
521.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
517.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
513.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
508.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
501.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
499.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
498.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
496.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
491.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
487.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
487.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
486.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
483.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
481.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
473.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
473.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
473.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
471.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
470.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
470.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
469.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
469.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
468.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
462.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
461.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
458.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
456.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
454.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
453.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
451.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
449.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
447.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
447.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
445.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
444.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
443.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
441.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
441.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
440.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
438.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
430.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
430.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
429.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
426.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
425.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
425.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
424.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
423.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
420.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
415.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
414.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
412.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
410.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
408.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
395.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
393.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
390.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
384.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
380.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
375.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
373.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
373.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
372.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
371.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
365.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
364.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
363.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
363.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
361.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
360.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
359.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
350.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
347.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
346.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
341.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
335.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
321.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
321.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
320.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
319.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
317.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
311.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
307.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
307.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
307.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
306.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
303.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
302.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
288.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
285.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
283.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
277.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
275.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
245.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
236.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
230.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
227.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
225.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
215.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
209.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
208.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
208.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
197.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
187.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
176.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
156.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
143.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
138.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
127.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
125.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
120.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
111.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
91.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
79.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
43.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
39.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
33.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
32.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
27.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
22.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
20.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
15.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
11.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
9.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MIF is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
395.2
Number of samples
231
Samples
Sample
Description
TPM
DO23519
0 years, male, NA, stage:3, alive, 630 days
1805.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
1794.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
1656.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
1473.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
1321.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
1299.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
1233.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1214.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
1173.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
1110.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
1057.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
969.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
947.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
927.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
924.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
916.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
882.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
870.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
864.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
849.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
847.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
830.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
781.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
780.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
774.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
771.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
769.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
765.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
742.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
733.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
723.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
720.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
707.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
689.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
638.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
628.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
627.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
612.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
602.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
601.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
572.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
567.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
567.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
561.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
549.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
532.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
530.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
526.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
524.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
512.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
509.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
504.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
501.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
501.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
498.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
495.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
494.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
490.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
483.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
483.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
475.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
474.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
458.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
456.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
455.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
451.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
438.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
434.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
427.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
426.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
425.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
423.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
423.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
417.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
415.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
414.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
412.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
410.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
403.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
398.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
394.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
387.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
387.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
387.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
386.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
384.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
382.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
379.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
372.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
371.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
369.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
368.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
367.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
365.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
362.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
361.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
359.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
358.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
355.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
354.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
348.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
345.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
342.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
341.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
338.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
330.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
325.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
316.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
316.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
311.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
310.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
309.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
307.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
305.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
303.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
302.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
302.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
301.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
301.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
300.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
300.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
299.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
298.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
294.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
293.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
289.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
287.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
285.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
278.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
275.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
274.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
273.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
265.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
260.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
260.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
258.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
258.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
257.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
257.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
256.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
254.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
254.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
250.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
249.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
248.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
247.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
246.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
241.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
238.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
238.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
231.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
229.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
229.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
228.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
227.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
227.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
225.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
225.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
224.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
222.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
221.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
217.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
216.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
214.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
208.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
204.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
201.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
200.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
200.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
198.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
194.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
191.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
190.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
189.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
189.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
188.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
187.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
182.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
181.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
180.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
179.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
178.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
178.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
177.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
176.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
173.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
173.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
172.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
172.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
172.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
165.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
161.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
160.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
159.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
159.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
158.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
156.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
155.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
151.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
147.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
146.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
145.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
144.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
139.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
138.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
138.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
138.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
136.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
131.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
131.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
129.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
122.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
118.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
115.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
113.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
112.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
110.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
109.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
109.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
104.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
99.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
95.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
80.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
77.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
76.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
76.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
71.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
68.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
52.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
13.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
4.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
331
Tumor
0.8
446
Normal
0.7
743
Tumor
0.7
445
Tumor
0.7
267
Tumor
0.7
746
Normal
0.6
172
Normal
0.6
196
Normal
0.6
392
Normal
0.6
648
Normal
0.6
123
Tumor
0.6
231
Tumor
0.5
148
Normal
0.5
313
Tumor
0.5
443
Tumor
0.5
223
Tumor
0.5
428
Normal
0.5
387
Tumor
0.5
354
Normal
0.5
422
Normal
0.5
278
Normal
0.5
642
Normal
0.5
635
Tumor
0.5
1027
Tumor
0.5
342
Normal
0.4
357
Tumor
0.4
367
Tumor
0.4
388
Normal
0.4
171
Tumor
0.4
298
Normal
0.4
385
Tumor
0.4
465
Tumor
0.4
147
Tumor
0.4
358
Normal
0.4
393
Tumor
0.4
124
Normal
0.4
685
Tumor
0.4
914
Normal
0.4
314
Normal
0.4
468
Normal
0.4
452
Normal
0.4
127
Tumor
0.3
162
Normal
0.3
195
Tumor
0.3
462
Normal
0.3
618
Normal
0.3
436
Normal
0.3
368
Normal
0.3
564
Normal
0.3
376
Normal
0.3
451
Tumor
0.3
343
Tumor
0.3
356
Normal
0.3
466
Normal
0.3
126
Normal
0.3
527
Tumor
0.3
258
Normal
0.3
444
Normal
0.2
866
Normal
0.2
146
Normal
0.2
414
Normal
0.2
366
Normal
0.2
277
Tumor
0.2
882
Normal
0.2
1041
Tumor
0.2
744
Normal
0.2
818
Normal
0.2
391
Tumor
0.2
137
Tumor
0.2
222
Normal
0.2
271
Tumor
0.2
132
Normal
0.2
344
Normal
0.2
424
Normal
0.2
745
Tumor
0.2
696
Normal
0.2
482
Normal
0.2
261
Tumor
0.2
664
Normal
0.2
663
Tumor
0.2
714
Normal
0.2
427
Tumor
0.2
114
Normal
0.2
353
Tumor
0.1
636
Normal
0.1
456
Normal
0.1
262
Normal
0.1
341
Tumor
0.1
641
Tumor
0.1
423
Tumor
0.1
268
Normal
0.1
352
Normal
0.1
395
Tumor
0.1
1021
Tumor
0.1
386
Normal
0.1
192
Normal
0.1
145
Tumor
0.1
413
Tumor
0.1
563
Tumor
0.1
214
Normal
0.1
867
Tumor
0.1
365
Tumor
0.1
421
Tumor
0.1
523
Tumor
0.1
111
Normal
0.1
161
Tumor
0.1
125
Tumor
0.1
858
Normal
0.1
911
Tumor
0.1
488
Normal
0.1
883
Tumor
0.1
1016
Normal
0.1
394
Normal
0.1
362
Normal
0.1
138
Normal
0.1
135
Tumor
0.1
666
Normal
0.0
727
Tumor
0.0
913
Tumor
0.0
188
Normal
0.0
538
Normal
0.0
257
Tumor
0.0
915
Tumor
0.0
136
Normal
0.0
361
Tumor
0.0
912
Normal
0.0
728
Normal
0.0
384
Normal
0.0
952
Normal
0.0
472
Normal
0.0
1032
Normal
0.0
884
Normal
0.0
477
Tumor
0.0
982
Normal
0.0
672
Normal
0.0
1026
Normal
0.0
617
Tumor
0.0
433
Tumor
0.0
272
Normal
0.0
537
Tumor
0.0
981
Tumor
0.0
327
Tumor
0.0
498
Normal
0.0
742
Normal
0.0
461
Tumor
0.0
815
Tumor
0.0
671
Tumor
0.0
983
Tumor
0.0
862
Normal
0.0
695
Tumor
0.0
954
Normal
0.0
232
Normal
-0.1
332
Normal
-0.1
191
Tumor
-0.1
964
Normal
-0.1
874
Normal
-0.1
297
Tumor
-0.1
471
Tumor
-0.1
698
Normal
-0.1
142
Normal
-0.1
925
Tumor
-0.1
571
Tumor
-0.1
375
Tumor
-0.1
351
Tumor
-0.1
434
Normal
-0.1
557
Tumor
-0.1
285
Tumor
-0.1
128
Normal
-0.1
824
Normal
-0.1
224
Normal
-0.1
186
Normal
-0.1
1022
Normal
-0.1
546
Normal
-0.1
545
Tumor
-0.1
851
Tumor
-0.1
494
Normal
-0.1
483
Tumor
-0.1
715
Tumor
-0.1
426
Normal
-0.1
984
Normal
-0.1
877
Tumor
-0.1
484
Normal
-0.1
487
Tumor
-0.1
861
Tumor
-0.1
1043
Tumor
-0.1
865
Tumor
-0.1
554
Normal
-0.1
868
Normal
-0.1
286
Normal
-0.1
425
Tumor
-0.2
534
Normal
-0.2
221
Tumor
-0.2
464
Normal
-0.2
1014
Normal
-0.2
1025
Tumor
-0.2
1042
Normal
-0.2
481
Tumor
-0.2
187
Tumor
-0.2
528
Normal
-0.2
921
Tumor
-0.2
525
Tumor
-0.2
922
Normal
-0.2
463
Tumor
-0.2
967
Tumor
-0.2
938
Normal
-0.2
514
Normal
-0.2
478
Normal
-0.2
813
Tumor
-0.2
467
Tumor
-0.2
953
Tumor
-0.2
131
Tumor
-0.2
686
Normal
-0.2
518
Normal
-0.2
396
Normal
-0.2
716
Normal
-0.2
141
Tumor
-0.2
786
Normal
-0.2
661
Tumor
-0.2
363
Tumor
-0.3
113
Tumor
-0.3
878
Normal
-0.3
383
Tumor
-0.3
517
Tumor
-0.3
497
Tumor
-0.3
524
Normal
-0.3
112
Tumor
-0.3
312
Normal
-0.3
284
Normal
-0.3
817
Tumor
-0.3
227
Tumor
-0.3
881
Tumor
-0.3
492
Normal
-0.3
328
Normal
-0.3
977
Tumor
-0.3
228
Normal
-0.3
968
Normal
-0.3
432
Normal
-0.3
756
Normal
-0.3
416
Normal
-0.3
516
Normal
-0.3
713
Tumor
-0.3
553
Tumor
-0.3
1028
Normal
-0.3
1046
Normal
-0.3
526
Normal
-0.3
572
Normal
-0.3
647
Tumor
-0.3
185
Tumor
-0.3
435
Tumor
-0.3
311
Tumor
-0.3
493
Tumor
-0.4
958
Normal
-0.4
513
Tumor
-0.4
955
Tumor
-0.4
535
Tumor
-0.4
814
Normal
-0.4
515
Tumor
-0.4
218
Normal
-0.4
283
Tumor
-0.4
364
Normal
-0.4
723
Tumor
-0.4
852
Normal
-0.4
558
Normal
-0.4
978
Normal
-0.4
1031
Tumor
-0.4
951
Tumor
-0.4
778
Normal
-0.4
873
Tumor
-0.4
957
Tumor
-0.4
944
Normal
-0.4
212
Normal
-0.5
966
Normal
-0.5
1044
Normal
-0.5
355
Tumor
-0.5
777
Tumor
-0.5
956
Normal
-0.5
1015
Tumor
-0.5
448
Normal
-0.5
816
Normal
-0.5
217
Tumor
-0.5
455
Tumor
-0.5
823
Tumor
-0.5
213
Tumor
-0.5
926
Normal
-0.5
447
Tumor
-0.5
573
Tumor
-0.5
533
Tumor
-0.6
722
Normal
-0.6
923
Tumor
-0.6
857
Tumor
-0.6
963
Tumor
-0.6
975
Tumor
-0.6
662
Normal
-0.6
627
Tumor
-0.6
916
Normal
-0.6
755
Tumor
-0.6
474
Normal
-0.7
724
Normal
-0.7
491
Tumor
-0.7
924
Normal
-0.7
1013
Tumor
-0.7
574
Normal
-0.7
976
Normal
-0.7
568
Normal
-0.7
415
Tumor
-0.7
864
Normal
-0.7
628
Normal
-0.7
697
Tumor
-0.8
665
Tumor
-0.8
785
Tumor
-0.8
738
Normal
-0.8
937
Tumor
-0.8
943
Tumor
-0.8
412
Normal
-0.8
917
Tumor
-0.9
965
Tumor
-0.9
616
Normal
-0.9
536
Normal
-0.9
737
Tumor
-0.9
211
Tumor
-1.0
721
Tumor
-1.0
1045
Tumor
-1.0
411
Tumor
-1.1
918
Normal
-1.2
473
Tumor
-1.2
863
Tumor
-1.2
431
Tumor
-1.2
741
Tumor
-1.2
615
Tumor
-1.3
567
Tumor
-1.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.