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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
194.5
nTPM
HPA Brain:
54.6
nTPM
GTEx:
194.5
nTPM
FANTOM5:
7.6
Scaled Tags Per Million
Pig:
687.5
nTPM
Mouse:
673.1
nTPM
Allen mouse:
6.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
54.6
Sample id
Sample description
nTPM
Amygdala nTPM: 52.6
2695
Female, age 67, right hemisphere
62.0
2514
Male, age 75, right hemisphere
54.6
2814
Male, age 76, right hemisphere
50.9
1987
Female, age 91, left hemisphere
49.5
2517
Female, age 94, left hemisphere
46.3
Basal amygdala nTPM: 45.9
2609
Male, age 75, right hemisphere
61.4
2827
Female, age 67, right hemisphere
60.1
2110
Male, age 80, left hemisphere
43.5
2685
Female, age 94, left hemisphere
41.5
2243
Female, age 91, right hemisphere
36.9
1955
Male, age 76, both hemispheres
31.7
Central amygdala nTPM: 52.4
2826
Female, age 94, left hemisphere
78.8
2515
Male, age 75, right hemisphere
60.0
1905
Male, age 76, both hemispheres
42.9
2239
Male, age 80, left hemisphere
42.8
2701
Female, age 91, right hemisphere
37.7
Corticomedial amygdala nTPM: 39.9
2428
Male, age 75, right hemisphere
54.5
2535
Female, age 67, right hemisphere
45.8
2829
Male, age 80, left hemisphere
41.1
2429
Female, age 94, left hemisphere
37.1
2242
Female, age 91, right hemisphere
33.1
2240
Male, age 76, both hemispheres
28.0
Lateral amygdala nTPM: 54.6
2830
Female, age 67, right hemisphere
80.6
2516
Male, age 75, right hemisphere
69.2
2534
Female, age 94, left hemisphere
59.8
2256
Male, age 80, left hemisphere
44.4
2255
Female, age 91, right hemisphere
37.1
1883
Male, age 76, both hemispheres
36.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
194.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 194.5
Samples: 152
Max nTPM: 579.4
Min nTPM: 66.3
Std nTPM: 90.7
Median nTPM: 173.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
579.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
494.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
467.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
457.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
451.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
415.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
398.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
389.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
389.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
362.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
341.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
340.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
334.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
329.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
319.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
316.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
302.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
299.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
295.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
294.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
278.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
276.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
272.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
269.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
263.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
262.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
262.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
260.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
259.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
258.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
255.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
252.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
243.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
243.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
241.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
240.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
236.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
236.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
226.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
224.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
219.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
218.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
215.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
212.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
210.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
210.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
210.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
209.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
208.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
207.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
204.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
202.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
202.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
201.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
201.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
200.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
199.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
198.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
196.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
192.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
191.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
190.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
189.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
189.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
188.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
187.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
187.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
184.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
184.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
183.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
183.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
178.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
178.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
176.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
175.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
174.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
172.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
171.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
171.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
171.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
171.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
170.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
167.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
165.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
165.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
163.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
162.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
161.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
158.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
158.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
157.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
156.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
155.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
152.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
152.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
151.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
150.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
146.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
146.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
145.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
145.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
144.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
144.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
141.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
140.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
139.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
137.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
137.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
134.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
132.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
130.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
129.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
129.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
128.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
127.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
127.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
126.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
126.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
126.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
125.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
124.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
124.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
123.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
121.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
121.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
120.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
119.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
119.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
118.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
118.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
116.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
114.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
112.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
110.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
109.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
108.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
106.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
106.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
103.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
103.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
103.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
102.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
101.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
93.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
89.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
86.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
83.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
80.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
73.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
73.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
70.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
66.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
673.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 673.1
Samples: 4
Max nTPM: 747.3
Min nTPM: 625.2
Sample A
Male
625.2
Sample B
Male
671.3
Sample C
Female
747.3
Sample D
Female
648.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.