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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
60.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
185.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
120.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
108.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
107.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
96.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
94.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
93.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
91.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
88.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
85.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
85.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
85.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
83.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
78.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
78.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
77.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
76.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
74.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
74.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
74.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
72.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
69.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
68.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
65.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
64.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
63.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
62.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
59.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
58.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
58.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
57.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
56.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
56.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
55.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
55.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
53.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
52.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
51.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
50.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
49.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
49.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
47.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
46.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
44.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
42.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
41.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
41.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
39.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
37.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
35.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
34.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
33.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
32.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
31.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
30.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
30.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
29.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
29.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
28.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
27.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
25.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
25.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
23.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
75.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
62.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
60.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
58.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
57.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
56.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
53.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
51.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
50.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
49.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
48.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
46.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
44.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
44.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
44.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
43.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
42.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
42.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
42.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
41.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
40.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
40.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
40.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
39.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
39.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
39.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
38.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
38.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
38.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
38.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
38.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
37.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
37.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
37.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
36.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
36.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
36.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
36.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
36.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
36.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
36.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
36.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
35.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
35.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
35.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
35.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
35.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
35.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
35.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
35.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
34.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
34.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
34.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
34.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
34.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
34.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
33.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
33.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
33.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
33.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
33.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
33.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
33.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
33.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
32.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
32.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
32.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
32.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
32.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
32.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
32.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
32.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
32.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
32.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
32.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
32.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
31.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
31.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
31.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
31.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
31.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
31.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
31.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
31.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
31.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
31.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
30.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
30.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
30.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
30.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
30.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
30.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
30.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
30.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
30.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
30.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
30.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
30.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
30.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
30.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
30.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
30.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
29.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
29.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
29.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
29.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
29.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
29.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
29.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
29.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
29.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
29.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
29.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
29.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
29.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
29.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
28.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
28.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
28.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
28.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
28.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
28.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
28.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
28.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
28.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
28.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
28.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
28.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
28.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
28.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
28.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
28.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
27.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
27.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
27.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
27.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
27.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
27.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
27.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
27.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
27.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
27.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
27.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
27.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
27.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
27.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
27.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
27.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
27.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
27.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
27.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
27.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
27.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
26.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
26.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
26.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
26.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
26.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
26.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
26.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
26.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
26.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
26.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
26.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
26.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
26.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
26.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
26.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
26.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
26.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
26.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
26.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
26.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
26.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
26.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
26.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
26.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
26.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
26.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
26.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
26.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
25.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
25.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
25.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
25.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
25.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
25.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
25.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
25.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
25.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
25.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
25.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
25.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
25.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
25.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
25.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
25.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
25.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
25.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
25.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
25.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
25.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
25.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
25.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
25.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
25.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
25.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
25.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
24.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
24.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
24.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
24.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
24.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
24.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
24.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
24.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
24.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
24.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
24.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
24.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
24.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
24.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
24.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
24.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
24.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
24.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
24.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
24.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
24.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
24.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
24.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
24.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
23.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
23.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
23.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
23.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
23.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
23.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
23.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
23.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
23.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
23.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
23.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
23.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
23.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
23.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
23.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
23.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
23.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
23.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
23.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
23.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
23.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
23.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
23.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
23.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
23.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
23.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
23.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
23.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
23.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
23.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
23.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
22.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
22.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
22.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
22.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
22.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
22.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
22.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
22.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
22.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
22.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
22.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
22.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
22.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
22.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
22.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
22.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
22.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
22.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
21.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
21.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
21.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
21.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
21.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
21.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
21.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
21.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
21.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
21.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
21.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
21.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
21.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
21.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
21.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
21.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
21.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
21.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
21.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
21.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
21.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
21.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
21.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
21.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
21.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
21.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
20.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
20.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
20.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
20.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
20.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
20.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
20.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
20.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
20.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
20.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
20.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
20.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
20.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
20.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
20.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
20.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
20.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
20.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
20.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
20.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
20.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
19.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
19.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
19.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
19.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
19.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
19.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
19.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
19.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
19.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
19.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
19.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
18.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
18.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
18.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
18.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
18.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
18.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
18.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
18.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
18.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
18.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
18.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
18.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
17.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
17.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
17.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
17.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
17.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
17.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
16.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
16.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
16.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
16.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
16.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
16.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
16.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
16.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
16.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
15.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
15.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
15.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
15.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
15.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
15.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
15.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
14.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
14.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
14.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
13.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
13.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
13.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
11.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
4.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
2.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
68.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
49.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
45.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
37.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
37.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
34.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
34.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
33.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
32.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
31.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
31.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
30.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
30.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
29.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
29.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
28.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
28.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
27.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
27.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
26.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
26.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
26.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
25.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
25.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
24.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
24.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
24.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
24.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
24.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
23.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
22.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
22.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
21.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
21.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
21.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
21.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
21.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
20.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
20.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
20.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
20.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
19.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
19.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
19.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
19.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
18.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
18.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
18.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
18.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
18.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
18.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
18.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
17.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
17.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
17.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
16.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
16.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
16.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
11.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
10.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
8.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
130.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
122.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
117.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
116.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
106.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
104.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
104.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
101.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
98.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
96.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
95.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
92.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
86.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
83.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
83.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
82.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
82.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
82.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
81.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
81.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
81.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
80.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
80.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
79.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
79.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
78.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
76.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
75.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
75.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
75.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
75.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
75.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
74.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
74.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
73.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
73.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
72.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
71.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
71.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
71.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
70.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
70.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
69.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
69.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
69.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
69.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
68.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
68.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
68.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
68.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
68.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
67.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
67.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
67.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
66.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
66.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
65.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
64.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
64.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
64.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
64.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
63.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
63.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
63.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
61.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
60.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
60.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
59.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
58.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
58.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
58.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
58.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
58.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
57.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
57.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
57.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
57.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
56.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
56.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
56.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
56.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
56.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
56.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
56.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
56.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
55.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
55.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
55.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
54.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
54.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
54.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
53.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
53.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
52.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
52.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
52.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
52.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
52.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
52.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
51.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
51.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
51.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
51.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
50.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
50.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
50.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
49.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
49.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
49.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
49.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
48.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
48.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
48.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
48.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
47.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
47.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
47.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
46.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
46.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
46.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
46.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
46.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
46.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
46.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
46.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
46.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
46.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
46.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
45.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
45.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
45.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
44.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
44.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
44.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
44.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
44.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
44.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
44.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
44.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
44.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
43.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
43.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
43.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
43.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
43.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
43.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
43.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
43.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
43.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
42.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
42.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
42.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
42.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
42.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
42.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
42.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
42.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
42.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
41.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
41.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
41.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
41.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
41.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
41.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
40.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
40.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
40.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
40.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
40.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
40.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
39.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
39.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
39.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
39.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
39.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
39.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
39.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
39.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
38.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
38.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
38.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
38.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
38.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
38.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
37.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
37.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
37.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
37.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
37.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
37.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
37.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
37.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
37.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
36.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
36.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
36.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
36.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
36.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
36.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
36.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
36.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
35.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
35.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
35.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
35.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
35.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
35.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
34.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
34.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
34.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
34.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
34.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
34.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
33.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
33.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
33.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
33.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
33.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
32.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
31.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
31.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
31.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
31.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
31.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
31.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
31.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
30.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
30.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
30.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
29.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
29.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
29.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
28.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
28.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
28.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
28.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
27.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
27.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
27.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
27.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
27.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
27.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
27.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
26.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
26.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
26.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
25.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
25.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
25.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
25.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
25.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
24.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
24.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
23.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
23.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
23.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
23.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
23.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
22.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
22.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
22.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
22.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
22.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
21.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
21.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
20.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
20.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
20.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
19.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
18.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
17.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
17.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
17.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
15.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
14.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.8
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088710001
Normal
0.6
CPT0064370003
Tumor
0.5
CPT0078930003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0015910003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0069190001
Normal
0.4
CPT0063640001
Normal
0.4
CPT0015730003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0001230001
Normal
0.4
CPT0078800003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0077140001
Normal
0.4
CPT0020120003
Tumor
0.3
CPT0076350001
Normal
0.3
CPT0001500009
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0001350001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0078510003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0025920001
Normal
0.3
CPT0077310003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0006730001
Normal
0.3
CPT0063320003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0086950003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0086360003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0012290003
Normal
0.2
CPT0065690003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0020020001
Normal
0.2
CPT0001270001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0010170001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0025050003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0002270011
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0001190001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0088920001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0064400001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0000890001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0007870001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0010110003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0012900004
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0012180003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0065810003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0075130003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0063330001
Normal
-0.3
CPT0078990003
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0012670003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0066480003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0024670003
Tumor
-0.4
CPT0009060003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0088970003
Tumor
-0.4
CPT0001540009
Tumor
-0.5
CPT0012080003
Tumor
-0.5
CPT0012370003
Tumor
-0.5
CPT0017410003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
