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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBA52 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1742.6
Number of samples
349
Samples
Sample
Description
TPM
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
7041.8
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
5581.2
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
4906.8
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
4522.7
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
4187.3
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
4063.4
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
4057.5
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
3945.9
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
3941.1
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
3721.5
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
3694.0
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
3610.8
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
3576.6
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
3565.6
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
3540.6
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
3492.2
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
3463.6
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
3427.4
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
3308.6
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
3306.1
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
3292.9
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
3133.0
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
3106.2
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
3072.4
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
3060.0
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
3010.0
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
2985.8
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
2951.1
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
2893.4
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
2893.3
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
2864.9
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
2853.1
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
2810.4
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
2745.5
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
2713.3
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
2703.7
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
2655.5
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
2645.9
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
2624.7
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
2616.2
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
2587.0
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
2579.2
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
2559.9
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
2538.1
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
2531.8
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2517.1
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
2479.2
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
2471.7
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
2466.8
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
2452.9
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
2447.0
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
2430.5
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
2406.2
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
2406.0
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
2401.1
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
2399.2
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
2369.4
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
2355.0
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
2343.1
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
2336.2
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
2327.6
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
2308.9
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
2268.8
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
2264.5
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
2263.5
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
2248.3
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
2236.7
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
2221.0
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
2220.8
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
2200.1
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
2196.0
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
2187.8
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
2181.9
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
2176.0
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
2155.4
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
2148.8
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2138.9
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
2133.4
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
2085.3
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
2081.6
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
2074.4
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
2066.2
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
2052.1
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
2050.5
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
2035.6
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
2024.4
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
2022.2
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
2019.9
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
2017.0
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
2005.3
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
2004.3
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
2000.2
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
1992.2
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
1986.6
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1972.7
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1965.3
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1939.5
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1937.4
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1913.7
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1911.8
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
1910.3
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
1899.0
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
1892.2
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
1890.1
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
1889.1
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
1876.9
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
1876.0
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
1875.7
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
1862.7
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
1858.6
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
1856.5
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
1851.4
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
1845.6
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1837.7
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
1835.5
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
1826.3
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
1821.7
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
1820.7
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
1817.6
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
1817.0
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
1815.3
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
1811.3
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1802.9
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
1789.5
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1788.9
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
1784.9
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
1779.5
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
1774.5
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1759.8
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
1759.7
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
1749.3
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1747.6
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1745.4
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
1738.7
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
1733.8
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
1726.1
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1726.0
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
1722.2
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1720.6
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
1719.4
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
1716.3
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
1712.2
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1711.6
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
1703.2
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1701.1
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1699.9
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1694.1
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
1689.8
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
1687.4
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
1683.6
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
1677.7
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
1675.8
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
1675.4
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
1673.8
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1664.1
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1659.4
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
1658.0
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
1657.5
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
1646.4
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
1646.3
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
1645.8
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1628.1
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
1627.0
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
1624.0
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
1620.8
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
1615.3
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
1606.5
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1595.7
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1585.6
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1581.4
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1575.6
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
1573.5
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
1570.4
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
1556.5
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
1545.5
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
1537.9
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1533.8
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
1532.9
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
1531.0
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
1524.3
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
1519.1
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1517.0
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1511.6
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
1498.8
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1491.2
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
1487.8
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
1487.1
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
1485.8
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
1484.9
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
1481.1
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
1478.9
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
1478.4
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
1473.0
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
1472.8
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
1472.5
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
1460.0
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
1458.9
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
1456.4
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
1455.1
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
1444.9
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
1436.8
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1436.3
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
1434.3
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
1427.7
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
1423.2
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1422.2
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
1419.9
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
1415.5
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
1412.9
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
1408.8
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
1408.2
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
1403.2
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
1401.8
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1400.8
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
1399.9
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
1399.4
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
1394.4
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
1394.2
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1388.8
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1385.8
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
1383.5
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
1383.4
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
1375.5
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
1375.1
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
1370.0
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
1369.0
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1368.8
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
1362.1
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1357.6
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
1356.0
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
1355.3
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
1349.7
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
1349.4
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1348.5
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
1342.7
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
1338.2
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
1338.1
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
1334.2
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1332.5
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
1330.9
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
1330.2
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
1329.2
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
1328.9
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
1328.6
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
1326.3
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1323.0
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
1320.5
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
1318.0
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
1316.3
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
1311.5
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
1307.5
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
1303.6
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
1297.5
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
1292.5
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
1289.4
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
1281.6
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1274.3
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
1268.3
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1267.4
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
1262.6
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
1260.3
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
1259.7
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1253.3
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1240.1
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1233.7
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1233.3
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
1230.3
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1227.1
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1219.9
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
1214.4
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1208.0
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1207.0
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
1202.3
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1190.3
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
1184.9
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
1171.7
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
1171.5
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
1170.2
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1159.7
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1154.6
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
1153.8
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
1144.8
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
1139.9
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1135.8
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
1134.7
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
1133.5
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
1131.5
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1126.6
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
1126.5
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
1122.9
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
1121.5
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1118.5
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
1109.5
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
1108.6
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
1099.9
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
1094.6
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
1087.3
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
1082.3
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
1074.3
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1061.4
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
1039.3
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1034.2
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
1028.8
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
994.6
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
983.7
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
980.5
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
952.6
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
948.2
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
940.9
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
937.6
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
937.4
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
934.4
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
931.6
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
920.5
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
902.2
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
894.4
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
884.3
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
873.7
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
863.5
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
862.3
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
858.2
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
857.7
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
849.9
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
837.3
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
831.1
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
830.5
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
830.3
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
828.3
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
821.1
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
819.2
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
817.0
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
816.1
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
814.3
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
812.5
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
796.9
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
796.2
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
784.8
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
784.5
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
783.7
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
778.8
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
763.9
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
742.9
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
741.4
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
704.6
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
695.0
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
678.0
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
675.3
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
626.7
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBA52 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1661.8
Number of samples
81
Samples
Sample
Description
TPM
DO46356
0 years, female, NA, stage:III, dead, 911 days
9230.9
DO46581
0 years, female, NA, stage:III, dead, 408 days
6040.7
DO46366
0 years, female, NA, stage:III, dead, 2054 days
4793.5
DO46331
0 years, female, NA, stage:III, dead, 612 days
4067.4
DO46333
0 years, female, NA, stage:III, dead, 359 days
3776.5
DO46350
0 years, female, NA, stage:III, dead, 886 days
3485.8
DO46611
0 years, female, NA, stage:III, dead, 734 days
3191.8
DO46352
0 years, female, NA, stage:III, dead, 677 days
2918.9
DO46576
0 years, female, NA, stage:III, alive, 133 days
2410.0
DO46330
0 years, female, NA, stage:III, dead, 684 days
2386.2
DO46342
0 years, female, NA, stage:III, dead, 1398 days
2299.4
DO46551
0 years, female, NA, stage:III, dead, 1055 days
2153.1
DO46370
0 years, female, NA, stage:III, dead, 1727 days
2096.5
DO46390
0 years, female, NA, stage:III, dead, 374 days
2052.0
DO46436
0 years, female, NA, stage:III, alive, 3193 days
2023.1
DO46591
0 years, female, NA, stage:III, dead, 195 days
1997.0
DO46463
0 years, female, NA, stage:III, dead, 2451 days
1959.9
DO46538
0 years, female, NA, stage:III, dead, 1527 days
1842.7
DO46493
0 years, female, NA, stage:IV, alive, 839 days
1820.3
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1726.8
DO46402
0 years, female, NA, stage:III, dead, 511 days
1669.9
DO46325
0 years, female, NA, stage:III, dead, 477 days
1660.7
DO46384
0 years, female, NA, stage:III, dead, 614 days
1658.1
DO46412
0 years, female, NA, stage:III, dead, 597 days
1652.8
DO46453
0 years, female, NA, stage:III, dead, 3294 days
1646.1
DO46374
0 years, female, NA, stage:III, dead, 1409 days
1606.4
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1606.0
DO46368
0 years, female, NA, stage:III, dead, 2879 days
1596.3
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
1577.8
DO46568
0 years, female, NA, stage:III, dead, 320 days
1560.6
DO46443
0 years, female, NA, stage:III, dead, 2464 days
1531.5
DO46432
0 years, female, NA, stage:III, alive, 2218 days
1529.6
DO46528
0 years, female, NA, stage:III, alive, 6139 days
1523.5
DO46348
0 years, female, NA, stage:IV, dead, 287 days
1495.0
DO46358
0 years, female, NA, stage:III, dead, 423 days
1476.8
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
1474.0
DO46408
0 years, female, NA, stage:III, dead, 489 days
1472.9
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
1469.1
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
1460.2
DO46388
0 years, female, NA, stage:III, dead, 413 days
1449.0
DO46396
0 years, female, NA, stage:III, dead, 583 days
1414.6
DO46364
0 years, female, NA, stage:III, dead, 806 days
1330.7
DO46566
0 years, female, NA, stage:III, dead, 673 days
1327.6
DO46508
0 years, female, NA, stage:III, dead, 2101 days
1249.1
DO46392
0 years, female, NA, stage:III, dead, 628 days
1228.0
DO46372
0 years, female, NA, stage:III, dead, 1326 days
1220.8
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
1219.5
DO46386
0 years, female, NA, stage:III, dead, 1162 days
1217.5
DO46560
0 years, female, NA, stage:IV, dead, 286 days
1212.0
DO46561
0 years, female, NA, stage:III, dead, 195 days
1186.9
DO46338
0 years, female, NA, stage:III, dead, 596 days
1176.4
DO46334
0 years, female, NA, stage:III, dead, 496 days
1168.8
DO46329
0 years, female, NA, stage:III, dead, 1699 days
1164.4
DO46378
0 years, female, NA, stage:III, alive, 843 days
1160.4
DO46606
0 years, female, NA, stage:III, alive, 804 days
1147.5
DO46448
0 years, female, NA, stage:III, dead, 654 days
1136.4
DO46400
0 years, female, NA, stage:III, dead, 719 days
1073.5
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1066.3
DO46344
0 years, female, NA, stage:III, dead, 642 days
1066.0
DO46518
0 years, female, NA, stage:III, alive, 2960 days
1065.8
DO46546
0 years, female, NA, stage:III, dead, 1889 days
999.4
DO46533
0 years, female, NA, stage:III, alive, 3667 days
998.6
DO46326
0 years, female, NA, stage:III, dead, 701 days
972.7
DO46398
0 years, female, NA, stage:III, alive, 437 days
938.8
DO46332
0 years, female, NA, stage:III, dead, 689 days
933.9
DO46586
0 years, female, NA, stage:III, dead, 1019 days
917.4
DO46602
0 years, female, NA, stage:III, dead, 205 days
915.7
DO46354
0 years, female, NA, stage:III, dead, 843 days
911.1
DO46327
0 years, female, NA, stage:III, dead, 184 days
901.1
DO46346
0 years, female, NA, stage:III, dead, 1187 days
898.5
DO46336
0 years, female, NA, stage:IV, dead, 664 days
887.5
DO46340
0 years, female, NA, stage:III, dead, 616 days
858.4
DO46328
0 years, female, NA, stage:III, dead, 972 days
846.2
DO46571
0 years, female, NA, stage:III, dead, 243 days
770.1
DO46588
0 years, female, NA, stage:III, dead, 438 days
743.6
DO46468
0 years, female, NA, stage:III, alive, 2776 days
724.9
DO46597
0 years, female, NA, stage:III, dead, 393 days
711.1
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
690.9
DO46404
0 years, female, NA, stage:III, dead, 690 days
639.1
DO46362
0 years, female, NA, stage:III, dead, 1639 days
611.9
DO46382
0 years, female, NA, stage:IV, dead, 311 days
518.0
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
N/A
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
N/A
21efd60f-6a31-4b98-9477-16a905_D2
Normal
N/A
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
N/A
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
N/A
285fed94-1495-448e-879b-b55de9_D2
Tumor
N/A
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
N/A
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
N/A
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
N/A
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
N/A
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
N/A
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
N/A
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
N/A
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
N/A
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
N/A
2f901c90-617e-46da-9fac-d68369_D2
Tumor
N/A
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
N/A
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
N/A
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
N/A
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
N/A
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
N/A
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
N/A
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
N/A
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
N/A
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
N/A
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
N/A
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
N/A
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
N/A
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
N/A
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
N/A
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
N/A
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
N/A
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
N/A
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
N/A
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
N/A
1772e913-f62e-446a-8cf3-720348_D2
Tumor
N/A
e9d416e7-f661-400a-896e-388545_D2
Tumor
N/A
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
N/A
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
N/A
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
N/A
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
N/A
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
N/A
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
N/A
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
N/A
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
N/A
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
N/A
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
N/A
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
N/A
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
N/A
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
N/A
10c2d629-0287-4511-ac25-f29031_D2
Tumor
N/A
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
N/A
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
N/A
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
N/A
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
N/A
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
N/A
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
N/A
340a3769-3031-41ae-bb08-a2f696_D2
Normal
N/A
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
N/A
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
N/A
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
N/A
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
N/A
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
N/A
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
N/A
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
N/A
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
N/A
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
N/A
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
N/A
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
N/A
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
N/A
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
N/A
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
N/A
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
N/A
15524912-685a-47ce-a824-567848_D2
Tumor
N/A
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
N/A
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
N/A
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
N/A
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
N/A
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
N/A
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
N/A
a3a26070-fb84-406a-8280-d555e6_D2
Normal
N/A
161317f3-1a39-438e-af45-cd2502_D2
Tumor
N/A
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
N/A
1db5574d-aca7-403c-8100-6e705f_D2
Normal
N/A
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
N/A
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
N/A
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
N/A
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
N/A
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
N/A
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
N/A
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
N/A
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
N/A
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
N/A
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
N/A
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
N/A
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
N/A
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
N/A
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
N/A
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
N/A
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
N/A
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
N/A
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
N/A
a65d8e76-640f-4341-a561-afbb57_D2
Normal
N/A
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
N/A
1a10c200-3895-4648-b951-94f99f_D2
Tumor
N/A
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
N/A
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
N/A
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
N/A
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.