HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:82.8 nTPM
HPA Brain:128.0 nTPM
GTEx:82.8 nTPM
FANTOM5:27.9 Scaled Tags Per Million
Pig:72.0 nTPM
Mouse:85.2 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB025629
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 128.0
Sample id Sample description nTPM
Hippocampus
nTPM: 121.5
2148 Female, age 91, left hemisphere 126.3
1911 Female, age 85, right hemisphere 125.3
2621 Female, age 67, right hemisphere 123.3
1898 Male, age 80, left hemisphere 120.5
1855 Male, age 76, left hemisphere 120.4
2529 Female, age 94, left hemisphere 113.4
Dentate gyrus
nTPM: 121.8
2530 Female, age 94, left hemisphere 138.6
1927 Female, age 91, both hemispheres 127.0
2531 Female, age 67, both hemispheres 125.6
2010 Male, age 76, both hemispheres 117.2
2246 Female, age 85, both hemispheres 115.0
2528 Male, age 74, both hemispheres 107.3
Entorhinal gyrus
nTPM: 77.1
2686 Male, age 75, right hemisphere 82.2
1787 Male, age 76, left hemisphere 82.0
2117 Female, age 91, right hemisphere 81.2
2764 Male, age 80, right hemisphere 79.4
2613 Female, age 94, left hemisphere 70.9
1938 Female, age 85, left hemisphere 66.7
Hippocampus, CA1
nTPM: 128.0
2749 Male, age 80, left hemisphere 190.3
1873 Female, age 85, both hemispheres 126.1
2527 Male, age 74, both hemispheres 110.3
2082 Female, age 91, right hemisphere 108.1
2045 Male, age 76, both hemispheres 105.4
Hippocampus, CA2
nTPM: 111.0
1963 Male, age 80, left hemisphere 167.2
1892 Male, age 76, both hemispheres 110.3
2113 Female, age 91, right hemisphere 106.5
2249 Male, age 74, both hemispheres 100.1
2437 Female, age 94, left hemisphere 94.4
1940 Female, age 85, left hemisphere 87.3
Hippocampus, CA3
nTPM: 121.5
2137 Male, age 80, left hemisphere 168.2
2861 Female, age 67, both hemispheres 166.2
2620 Female, age 94, left hemisphere 122.4
1867 Male, age 76, both hemispheres 101.7
2436 Male, age 74, both hemispheres 87.0
1891 Female, age 85, both hemispheres 83.5
Parahippocampal cortex
nTPM: 86.1
2245 Female, age 91, both hemispheres 116.9
2250 Female, age 67, right hemisphere 105.9
2622 Female, age 67, right hemisphere 101.7
2018 Male, age 76, both hemispheres 99.0
2693 Female, age 94, both hemispheres 84.0
1933 Female, age 85, both hemispheres 77.5
2532 Female, age 72, left hemisphere 75.9
2692 Male, age 74, both hemispheres 72.4
1990 Female, age 91, right hemisphere 66.8
1850 Male, age 80, both hemispheres 60.8
Perirhinal gyrus
nTPM: 83.6
2521 Female, age 94, right hemisphere 105.7
1794 Male, age 80, right hemisphere 84.4
1847 Female, age 91, left hemisphere 79.4
1841 Female, age 85, right hemisphere 79.1
2848 Male, age 76, right hemisphere 69.5
Subiculum
nTPM: 89.3
1901 Male, age 80, both hemispheres 105.1
2042 Male, age 76, both hemispheres 100.7
2729 Female, age 91, right hemisphere 100.5
2619 Male, age 74, both hemispheres 85.1
1977 Female, age 85, both hemispheres 77.2
2438 Female, age 94, left hemisphere 67.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 82.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 82.8
Samples: 197

Max nTPM: 170.3
Min nTPM: 13.2
Std nTPM: 26.4
Median nTPM: 79.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 170.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 147.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 146.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 145.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 142.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 139.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 137.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 134.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 133.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 133.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 133.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 27.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.9
FF:10153-102I9 76 years, female 30.9
FF:10169-103B7 60 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 72.0
Pig sample Sample description nTPM
Subiculum
nTPM: 58.6
Samples: 4

Max nTPM: 82.5
Min nTPM: 46.4
Sample A Female 82.5
Sample B Female 51.8
Sample C Male 53.8
Sample D Male 46.4
Dorsal hippocampus
nTPM: 72.0
Samples: 4

Max nTPM: 90.4
Min nTPM: 55.9
Sample A Female 90.4
Sample B Female 77.9
Sample C Male 63.7
Sample D Male 55.9
Entorhinal cortex
nTPM: 62.9
Samples: 4

Max nTPM: 84.4
Min nTPM: 46.2
Sample A Female 62.1
Sample B Female 58.8
Sample C Male 84.4
Sample D Male 46.2
Ventral hippocampus
nTPM: 64.0
Samples: 4

Max nTPM: 74.9
Min nTPM: 51.1
Sample A Female 63.9
Sample B Female 51.1
Sample C Male 74.9
Sample D Male 66.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 85.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.9
Samples: 4

Max nTPM: 64.9
Min nTPM: 58.1
Sample A Male 58.1
Sample B Male 58.4
Sample C Female 62.1
Sample D Female 64.9
Hippocampal formation
nTPM: 85.3
Samples: 4

Max nTPM: 98.9
Min nTPM: 74.5
Sample A Male 74.5
Sample B Male 84.5
Sample C Female 98.9
Sample D Female 83.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
69059974 Antisense, RP_050317_04_H07, Mouse strain C57BL/6J (56 days, male) 12.1

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