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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOMM6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
147.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
330.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
320.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
300.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
283.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
233.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
227.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
227.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
215.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
210.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
191.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
186.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
184.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
173.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
164.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
162.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
160.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
157.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
157.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
156.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
150.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
150.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
149.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
149.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
148.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
146.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
145.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
144.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
140.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
140.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
139.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
137.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
136.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
135.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
133.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
129.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
128.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
128.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
125.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
123.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
123.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
123.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
121.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
119.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
119.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
118.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
118.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
117.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
117.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
111.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
111.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
107.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
107.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
106.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
105.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
105.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
93.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
92.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
89.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
86.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
85.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
82.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
79.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
74.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOMM6 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
161.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
1132.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
429.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
388.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
372.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
338.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
325.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
305.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
298.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
278.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
275.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
271.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
271.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
268.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
258.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
257.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
248.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
247.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
247.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
245.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
242.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
242.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
242.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
240.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
240.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
239.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
237.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
237.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
236.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
234.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
233.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
233.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
228.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
227.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
225.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
225.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
224.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
223.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
221.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
221.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
221.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
220.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
219.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
217.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
215.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
214.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
212.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
211.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
211.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
210.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
208.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
208.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
206.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
205.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
205.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
205.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
204.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
204.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
203.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
203.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
203.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
203.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
202.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
201.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
201.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
200.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
200.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
200.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
199.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
199.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
199.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
198.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
198.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
198.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
198.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
198.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
197.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
197.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
196.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
196.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
196.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
195.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
195.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
194.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
194.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
194.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
194.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
193.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
193.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
192.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
192.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
190.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
190.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
189.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
189.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
189.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
188.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
188.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
188.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
188.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
188.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
187.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
187.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
187.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
186.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
186.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
186.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
186.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
186.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
185.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
185.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
185.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
185.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
185.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
185.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
183.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
183.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
183.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
183.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
183.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
183.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
183.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
183.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
183.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
183.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
182.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
182.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
182.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
182.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
182.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
182.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
182.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
182.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
182.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
181.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
180.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
180.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
180.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
180.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
180.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
180.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
179.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
179.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
179.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
178.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
178.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
178.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
177.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
176.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
176.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
176.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
176.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
175.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
175.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
174.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
174.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
174.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
174.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
174.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
174.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
173.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
173.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
173.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
173.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
173.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
173.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
173.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
173.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
173.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
173.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
173.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
172.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
172.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
172.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
171.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
171.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
170.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
170.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
169.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
169.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
169.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
169.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
168.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
168.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
168.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
168.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
168.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
168.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
168.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
168.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
167.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
167.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
167.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
167.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
167.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
167.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
166.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
166.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
166.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
165.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
165.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
165.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
165.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
165.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
165.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
165.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
165.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
165.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
165.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
164.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
164.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
164.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
164.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
163.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
163.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
163.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
163.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
163.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
163.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
162.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
162.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
162.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
162.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
162.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
162.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
162.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
162.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
162.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
161.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
161.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
161.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
161.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
160.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
160.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
160.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
160.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
159.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
159.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
159.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
159.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
158.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
158.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
157.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
157.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
157.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
156.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
156.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
156.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
156.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
155.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
155.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
155.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
155.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
155.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
155.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
155.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
155.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
154.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
154.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
154.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
154.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
153.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
153.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
153.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
153.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
153.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
153.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
152.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
152.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
152.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
152.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
152.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
152.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
152.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
152.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
152.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
151.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
151.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
151.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
151.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
151.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
151.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
151.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
151.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
151.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
151.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
151.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
150.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
150.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
150.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
150.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
150.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
149.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
149.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
149.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
149.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
149.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
148.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
148.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
148.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
148.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
148.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
148.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
148.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
148.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
148.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
148.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
147.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
147.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
147.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
147.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
147.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
146.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
146.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
146.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
146.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
146.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
146.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
146.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
145.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
145.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
145.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
145.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
145.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
145.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
145.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
145.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
145.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
144.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
144.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
144.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
144.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
143.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
143.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
143.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
143.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
142.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
142.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
142.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
141.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
141.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
141.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
141.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
141.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
141.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
141.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
141.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
141.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
140.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
140.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
140.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
140.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
140.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
140.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
140.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
140.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
140.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
139.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
139.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
139.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
139.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
139.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
139.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
139.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
139.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
139.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
138.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
138.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
138.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
138.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
138.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
138.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
138.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
137.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
137.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
137.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
137.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
137.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
137.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
136.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
136.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
136.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
135.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
135.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
135.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
135.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
135.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
134.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
134.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
134.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
134.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
134.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
134.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
133.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
133.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
132.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
132.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
132.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
132.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
131.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
131.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
131.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
130.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
130.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
130.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
130.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
130.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
130.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
129.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
129.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
129.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
128.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
128.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
127.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
127.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
127.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
127.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
127.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
127.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
127.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
127.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
127.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
127.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
126.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
126.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
126.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
125.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
124.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
124.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
123.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
122.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
122.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
120.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
120.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
120.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
120.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
120.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
119.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
119.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
119.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
118.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
118.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
118.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
117.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
117.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
117.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
117.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
117.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
116.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
116.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
116.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
116.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
116.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
115.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
115.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
115.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
114.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
114.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
113.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
113.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
113.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
112.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
112.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
112.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
111.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
111.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
111.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
110.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
110.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
110.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
110.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
109.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
108.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
108.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
108.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
107.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
107.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
106.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
106.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
106.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
106.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
106.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
106.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
105.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
105.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
104.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
104.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
103.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
103.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
103.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
102.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
101.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
100.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
100.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
98.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
98.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
97.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
97.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
95.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
95.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
94.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
93.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
93.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
93.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
93.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
93.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
91.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
89.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
89.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
86.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
85.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
84.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
82.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
80.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
78.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
76.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
76.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
74.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
59.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
56.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
53.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOMM6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
163.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
418.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
297.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
289.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
246.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
239.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
238.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
232.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
223.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
215.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
212.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
211.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
210.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
207.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
204.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
201.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
200.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
199.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
196.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
194.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
192.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
191.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
188.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
181.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
181.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
180.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
177.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
176.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
174.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
173.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
173.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
172.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
172.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
170.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
168.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
168.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
167.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
167.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
167.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
167.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
166.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
166.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
165.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
164.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
163.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
162.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
161.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
161.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
159.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
159.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
159.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
157.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
157.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
157.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
156.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
156.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
156.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
155.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
155.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
154.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
153.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
151.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
150.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
147.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
146.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
146.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
143.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
140.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
138.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
137.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
137.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
136.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
135.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
134.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
132.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
132.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
131.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
131.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
130.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
128.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
128.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
128.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
127.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
127.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
126.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
125.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
124.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
124.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
119.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
118.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
117.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
116.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
115.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
111.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
111.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
107.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
106.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
106.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
98.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
94.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOMM6 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
224.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2331.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
2224.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
1993.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
1336.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
425.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
408.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
402.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
382.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
372.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
369.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
358.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
343.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
333.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
329.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
322.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
315.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
311.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
310.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
309.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
307.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
306.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
302.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
299.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
297.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
293.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
293.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
291.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
289.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
286.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
286.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
282.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
273.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
271.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
270.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
270.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
270.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
267.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
262.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
259.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
255.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
254.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
253.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
253.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
252.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
249.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
249.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
249.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
249.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
248.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
248.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
245.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
244.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
242.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
241.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
239.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
238.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
238.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
237.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
236.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
236.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
235.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
234.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
233.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
231.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
230.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
230.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
229.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
229.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
229.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
228.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
228.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
228.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
227.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
226.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
225.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
225.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
225.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
225.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
225.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
225.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
225.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
223.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
223.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
223.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
223.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
223.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
222.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
222.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
222.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
222.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
221.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
220.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
219.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
219.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
218.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
218.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
218.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
216.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
216.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
216.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
215.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
215.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
215.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
215.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
215.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
214.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
214.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
213.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
213.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
211.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
211.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
211.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
211.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
211.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
211.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
210.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
209.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
209.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
209.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
209.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
208.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
208.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
208.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
208.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
208.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
207.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
207.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
207.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
207.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
206.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
206.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
206.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
204.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
203.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
203.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
203.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
202.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
202.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
202.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
200.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
200.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
199.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
199.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
199.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
199.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
199.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
198.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
198.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
197.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
195.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
195.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
195.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
195.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
194.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
194.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
194.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
194.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
193.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
193.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
193.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
192.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
192.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
192.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
191.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
191.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
190.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
190.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
190.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
189.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
186.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
185.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
185.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
184.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
184.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
184.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
183.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
182.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
181.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
181.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
180.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
179.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
178.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
177.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
177.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
177.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
176.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
176.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
176.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
175.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
174.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
173.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
173.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
172.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
171.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
170.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
170.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
170.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
168.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
168.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
168.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
167.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
166.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
166.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
165.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
165.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
164.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
163.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
163.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
162.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
162.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
161.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
160.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
160.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
159.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
158.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
157.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
157.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
157.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
154.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
152.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
152.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
152.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
150.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
149.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
148.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
148.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
148.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
147.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
147.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
146.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
146.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
145.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
143.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
142.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
142.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
139.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
138.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
138.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
134.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
134.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
134.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
134.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
133.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
133.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
133.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
132.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
131.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
131.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
129.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
127.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
126.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
126.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
124.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
122.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
122.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
122.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
121.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
120.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
119.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
119.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
119.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
119.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
119.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
117.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
116.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
115.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
113.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
111.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
108.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
108.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
106.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
98.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
98.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
97.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
97.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
96.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
92.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
89.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
88.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
85.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
80.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
63.7
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0015730003
Tumor
1.6
CPT0086030003
Tumor
1.5
CPT0066430001
Normal
1.4
CPT0017850003
Tumor
1.0
CPT0092290003
Tumor
1.0
CPT0012180003
Tumor
0.9
CPT0026420001
Normal
0.9
CPT0081880003
Tumor
0.9
CPT0065750003
Tumor
0.9
CPT0002270011
Tumor
0.8
CPT0089460004
Tumor
0.8
CPT0001350001
Normal
0.8
CPT0001500009
Tumor
0.8
CPT0020020001
Normal
0.7
CPT0092800003
Normal
0.7
CPT0078670001
Normal
0.6
CPT0078510003
Tumor
0.6
CPT0006530001
Normal
0.6
CPT0023350003
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0014350001
Normal
0.6
CPT0078930003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0001510001
Normal
0.4
CPT0010170001
Normal
0.4
CPT0086370003
Normal
0.4
CPT0092310003
Normal
0.4
CPT0020130001
Normal
0.4
CPT0064370003
Tumor
0.4
CPT0069010001
Normal
0.4
CPT0065820001
Normal
0.3
CPT0025170003
Tumor
0.3
CPT0006730001
Normal
0.3
CPT0065690003
Tumor
0.3
CPT0077140001
Normal
0.3
CPT0001230001
Normal
0.3
CPT0012670003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0025920001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0065930003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0076350001
Normal
0.3
CPT0019160001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0092740003
Normal
0.2
CPT0065810003
Tumor
0.2
CPT0007470001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0025050003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0006630003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0086360003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0011410003
Tumor
0.2
CPT0077500001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0087040003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0089040001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0089020003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0007320003
Tumor
-0.2
CPT0001340003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0079430001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0013790003
Normal
-0.3
CPT0019130003
Tumor
-0.3
CPT0012770003
Normal
-0.3
CPT0001180009
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0018250001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0086820003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0069000003
Tumor
-0.3
CPT0063330001
Normal
-0.3
CPT0092160003
Tumor
-0.3
CPT0010120001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0078800003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0010110003
Tumor
-0.4
CPT0012640003
Normal
-0.4
CPT0010160003
Tumor
-0.4
CPT0077490003
Tumor
-0.4
CPT0075170001
Normal
-0.4
CPT0001190001
Normal
-0.4
CPT0025350003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0082010001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0088920001
Normal
-0.5
CPT0001260009
Tumor
-0.5
CPT0025230003
Tumor
-0.5
CPT0084590001
Normal
-0.5
CPT0078830003
Tumor
-0.5
CPT0012550003
Tumor
-0.5
CPT0000640003
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0066520001
Normal
-0.6
CPT0078660003
Tumor
-0.6
CPT0075130003
Tumor
-0.6
CPT0085670003
Tumor
-0.6
CPT0000870016
Tumor
-0.7
CPT0088900003
Tumor
-0.7
CPT0065870003
Tumor
-0.7
CPT0078990003
Tumor
-0.7
CPT0076330003
Tumor
-0.7
CPT0081990003
Tumor
-0.7
CPT0079300001
Normal
-0.7
CPT0014450004
Tumor
-0.7
CPT0088570001
Normal
-0.8
CPT0079230003
Tumor
-0.8
CPT0084560003
Tumor
-0.8
CPT0088970003
Tumor
-0.8
CPT0065430003
Tumor
-0.9
CPT0012570003
Normal
-0.9
CPT0024680001
Normal
-1.0
CPT0001540009
Tumor
-1.1
CPT0079270003
Tumor
-1.1
CPT0006440003
Tumor
-1.2
CPT0026410003
Tumor
-1.4
CPT0088550004
Tumor
-1.5
CPT0012370003
Tumor
-1.5
CPT0079180003
Tumor
-1.6
CPT0066470004
Tumor
-1.6
CPT0011240003
Tumor
-1.7
CPT0019990003
Tumor
-1.7
CPT0024670003
Tumor
-1.7
CPT0012920003
Normal
N/A
CPT0021240003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0009020003
Normal
N/A
CPT0017410003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0009080003
Normal
N/A
CPT0009060003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
