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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IRF9 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
31.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
26.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
22.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
18.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
16.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
16.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
15.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
13.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
12.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
12.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
10.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
9.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
9.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
7.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
7.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
5.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
5.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
5.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
5.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
4.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
4.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
4.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
3.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
2.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
2.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IRF9 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
56.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
55.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
47.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
47.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
44.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
43.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
43.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
43.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
42.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
42.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
39.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
39.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
39.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
39.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
39.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
39.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
38.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
38.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
38.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
38.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
38.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
37.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
37.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
37.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
37.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
37.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
36.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
36.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
36.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
36.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
36.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
35.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
35.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
35.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
35.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
35.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
35.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
34.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
34.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
34.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
34.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
34.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
34.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
34.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
34.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
34.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
34.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
33.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
33.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
33.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
33.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
33.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
33.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
33.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
33.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
33.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
33.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
33.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
33.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
33.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
33.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
32.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
32.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
32.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
32.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
32.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
32.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
32.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
32.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
32.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
32.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
32.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
32.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
31.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
31.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
31.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
31.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
31.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
31.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
31.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
31.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
31.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
31.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
31.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
31.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
30.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
30.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
30.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
30.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
30.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
30.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
30.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
30.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
30.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
30.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
29.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
29.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
29.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
29.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
29.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
29.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
29.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
29.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
29.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
29.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
29.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
29.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
29.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
29.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
29.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
28.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
28.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
28.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
28.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
28.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
28.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
28.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
28.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
28.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
28.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
27.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
27.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
27.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
27.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
27.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
27.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
27.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
27.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
27.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
27.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
27.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
26.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
26.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
26.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
26.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
26.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
26.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
26.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
26.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
26.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
26.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
26.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
26.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
26.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
26.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
26.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
26.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
26.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
26.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
26.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
25.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
25.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
25.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
25.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
25.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
25.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
25.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
25.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
25.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
25.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
25.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
25.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
25.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
25.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
24.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
24.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
24.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
24.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
24.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
24.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
24.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
24.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
24.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
24.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
24.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
24.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
24.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
24.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
24.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
24.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
24.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
24.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
24.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
23.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
23.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
23.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
23.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
23.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
23.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
23.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
23.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
23.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
23.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
23.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
23.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
23.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
23.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
22.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
22.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
22.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
22.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
22.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
22.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
22.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
22.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
22.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
22.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
22.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
22.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
22.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
21.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
21.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
21.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
21.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
21.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
21.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
21.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
21.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
21.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
21.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
21.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
21.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
21.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
21.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
21.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
21.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
21.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
21.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
21.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
21.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
21.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
20.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
20.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
20.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
20.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
20.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
20.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
20.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
20.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
20.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
20.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
20.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
20.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
20.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
20.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
20.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
20.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
20.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
20.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
19.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
19.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
19.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
19.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
19.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
19.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
19.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
19.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
19.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
19.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
18.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
18.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
18.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
18.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
18.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
18.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
18.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
18.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
18.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
18.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
18.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
18.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
18.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
18.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
18.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
18.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
17.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
17.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
17.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
17.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
17.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
17.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
17.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
17.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
17.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
17.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
17.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
16.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
16.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
16.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
16.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
16.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
16.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
16.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
16.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
16.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
15.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
15.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
15.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
15.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
15.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
15.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
15.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
14.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
14.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
14.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
13.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
13.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
13.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
13.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
13.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
12.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
11.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
10.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
8.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
8.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
3.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
3.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IRF9 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
43.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
43.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
42.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
42.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
41.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
41.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
40.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
39.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
37.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
34.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
33.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
32.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
32.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
31.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
30.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
30.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
30.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
30.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
30.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
30.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
29.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
29.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
28.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
28.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
28.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
27.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
27.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
27.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
26.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
26.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
26.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
25.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
25.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
25.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
25.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
23.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
23.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
23.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
22.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
22.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
21.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
21.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
21.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
21.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
20.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
20.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
20.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
20.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
19.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
19.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
18.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
18.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
17.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
17.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
16.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
16.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
16.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
14.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
14.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
13.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
10.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
9.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
9.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
6.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IRF9 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
71.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
58.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
49.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
45.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
43.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
42.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
40.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
39.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
38.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
37.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
36.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
35.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
34.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
34.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
34.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
33.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
33.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
32.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
31.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
30.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
30.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
30.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
28.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
28.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
28.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
28.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
28.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
28.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
27.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
27.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
27.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
27.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
27.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
26.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
26.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
26.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
25.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
25.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
25.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
25.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
25.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
25.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
25.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
25.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
25.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
25.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
25.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
24.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
24.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
24.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
24.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
24.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
24.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
23.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
23.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
23.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
23.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
22.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
22.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
22.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
22.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
22.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
22.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
22.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
22.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
22.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
22.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
21.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
21.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
21.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
21.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
21.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
21.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
21.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
21.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
21.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
20.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
20.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
20.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
20.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
20.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
20.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
20.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
20.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
20.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
19.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
19.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
19.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
19.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
19.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
18.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
18.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
18.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
18.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
18.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
18.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
18.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
18.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
18.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
17.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
17.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
17.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
17.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
16.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
16.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
16.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
16.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
16.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
16.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
15.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
15.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
15.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
15.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
15.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
15.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
15.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
15.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
15.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
15.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
15.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
14.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
13.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
13.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
13.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
13.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
13.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
12.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
12.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
12.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
12.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
11.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
11.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
11.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
10.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
10.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
9.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
9.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
8.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
8.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
7.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
7.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
7.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
6.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
6.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
6.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
5.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
5.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
4.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
3.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
2.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078990003
Tumor
0.9
CPT0079380003
Tumor
0.8
CPT0001180009
Tumor
0.7
CPT0075130003
Tumor
0.7
CPT0015730003
Tumor
0.7
CPT0088550004
Tumor
0.6
CPT0026410003
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0006900003
Tumor
0.6
CPT0023690003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0010110003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0092190003
Normal
0.5
CPT0021240003
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0086820003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0092730003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0086030003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0001220008
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0075170001
Normal
0.3
CPT0077310003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0075570001
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0017850003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0012920003
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0001340003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0006530001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0001500009
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0069160003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0078660003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0002270011
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0025050003
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0089480003
Normal
-0.2
CPT0066470004
Tumor
-0.2
CPT0023360001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0079230003
Tumor
-0.3
CPT0020130001
Normal
-0.3
CPT0085670003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0014450004
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0086890003
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0066430001
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0076330003
Tumor
-0.5
CPT0077500001
Normal
-0.5
CPT0023710001
Normal
-0.5
CPT0010170001
Normal
-0.5
CPT0078840001
Normal
-0.5
CPT0081620001
Normal
-0.5
CPT0006950001
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0026420001
Normal
-0.6
CPT0092800003
Normal
-0.6
CPT0077140001
Normal
-0.6
CPT0000790001
Normal
-0.7
CPT0079180003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
