COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: Medium
RNA expressioni
Consensus:1.1 nTPM
HPA:0.3 nTPM
GTEx:1.1 nTPM
FANTOM5:0.0 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION
Neuroendocrine cellsTuft cellsColonocytesGoblet cellsT-cellsNK-cellsEnteric transient amplifying cellsEnteric stem cells0246810nCPM

COLON - Antibody stainingi
Antibody HPA047497
Endothelial cells Medium
Glandular cells High
Peripheral nerve/ganglion Medium


COLON - HPA RNA-seqi
Average nTPMi 0.3
overview
Male, age 54
Colon sample 67
nTPM: 0.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 0.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 0.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 0.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 0.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 0.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 0.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 0
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 0.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 0.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 0.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 0.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 1.1
GTEx sample id Sample description nTPM
0.00.10.20.00.50.00.51.01.52.02.53.03.5
Colon - Sigmoid
Average nTPM: 0.2
Samples: 419

Max nTPM: 3.8
Min nTPM: 0.0
Std nTPM: 0.4
Median nTPM: 0.1
GTEX-Y8E4-2326-SM-EAZAZ 40-49 years, male 3.8
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 3.5
GTEX-Z9EW-1126-SM-HLJRW 40-49 years, male 3.0
GTEX-XMK1-1626-SM-HLJRZ 40-49 years, male 2.9
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 2.6
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 2.6
GTEX-WEY5-1626-SM-HLJRJ 40-49 years, female 2.5
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 2.0
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 1.9
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 1.6
GTEX-WHSB-1126-SM-GMXAL 50-59 years, male 1.6
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0.10.51.40.03.3012345678910111213
Colon - Transverse
Average nTPM: 1.1
Samples: 479

Max nTPM: 13.2
Min nTPM: 0.0
Std nTPM: 1.5
Median nTPM: 0.5
GTEX-OHPL-1426-SM-G9ER7 60-69 years, female 13.2
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 12.8
GTEX-145MH-2526-SM-GJ3RS 50-59 years, male 9.3
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 7.4
GTEX-15RIE-1826-SM-6M48P 60-69 years, male 6.8
GTEX-1R7EU-1926-SM-E9U62 60-69 years, male 6.3
GTEX-PW2O-0926-SM-EZ6KV 20-29 years, male 6.3
GTEX-1MJK3-0926-SM-EV7AY 20-29 years, male 6.1
GTEX-1PIGE-1426-SM-E9U61 20-29 years, male 5.9
GTEX-WHWD-1226-SM-4M9QD 50-59 years, male 5.9
GTEX-1IDJI-2326-SM-GA918 50-59 years, female 5.8
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 0.0
FF:10014-101C5 62,83,84 years, mixed 0.0

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