HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:42.6 nTPM
HPA Brain:133.7 nTPM
GTEx:42.6 nTPM
FANTOM5:170.3 Scaled Tags Per Million
Pig:492.9 nTPM
Mouse:394.9 nTPM
Allen mouse:15.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000540
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 133.7
Sample id Sample description nTPM
Hippocampus
nTPM: 73.8
1898 Male, age 80, left hemisphere 109.0
1855 Male, age 76, left hemisphere 89.3
2621 Female, age 67, right hemisphere 83.6
2148 Female, age 91, left hemisphere 63.9
1911 Female, age 85, right hemisphere 51.1
2529 Female, age 94, left hemisphere 45.7
Dentate gyrus
nTPM: 83.1
1927 Female, age 91, both hemispheres 124.9
2010 Male, age 76, both hemispheres 96.5
2530 Female, age 94, left hemisphere 84.7
2246 Female, age 85, both hemispheres 69.9
2528 Male, age 74, both hemispheres 61.4
2531 Female, age 67, both hemispheres 61.2
Entorhinal gyrus
nTPM: 87.8
2613 Female, age 94, left hemisphere 119.0
2764 Male, age 80, right hemisphere 110.1
1938 Female, age 85, left hemisphere 105.3
1787 Male, age 76, left hemisphere 83.0
2686 Male, age 75, right hemisphere 65.3
2117 Female, age 91, right hemisphere 44.2
Hippocampus, CA1
nTPM: 91.1
2749 Male, age 80, left hemisphere 154.7
1873 Female, age 85, both hemispheres 93.7
2045 Male, age 76, both hemispheres 93.7
2527 Male, age 74, both hemispheres 58.8
2082 Female, age 91, right hemisphere 54.8
Hippocampus, CA2
nTPM: 81.3
1892 Male, age 76, both hemispheres 124.3
1963 Male, age 80, left hemisphere 112.0
2437 Female, age 94, left hemisphere 76.1
1940 Female, age 85, left hemisphere 64.4
2249 Male, age 74, both hemispheres 57.9
2113 Female, age 91, right hemisphere 52.8
Hippocampus, CA3
nTPM: 79.1
2137 Male, age 80, left hemisphere 106.3
1867 Male, age 76, both hemispheres 97.7
2620 Female, age 94, left hemisphere 89.1
1891 Female, age 85, both hemispheres 61.7
2436 Male, age 74, both hemispheres 60.2
2861 Female, age 67, both hemispheres 59.4
Parahippocampal cortex
nTPM: 94.6
1850 Male, age 80, both hemispheres 134.9
1990 Female, age 91, right hemisphere 107.9
2245 Female, age 91, both hemispheres 106.7
2693 Female, age 94, both hemispheres 104.5
1933 Female, age 85, both hemispheres 100.2
2250 Female, age 67, right hemisphere 97.6
2532 Female, age 72, left hemisphere 95.3
2018 Male, age 76, both hemispheres 74.0
2622 Female, age 67, right hemisphere 69.1
2692 Male, age 74, both hemispheres 55.9
Perirhinal gyrus
nTPM: 133.7
1847 Female, age 91, left hemisphere 175.2
2521 Female, age 94, right hemisphere 139.0
1794 Male, age 80, right hemisphere 128.6
1841 Female, age 85, right hemisphere 127.1
2848 Male, age 76, right hemisphere 98.8
Subiculum
nTPM: 64.5
1977 Female, age 85, both hemispheres 90.6
1901 Male, age 80, both hemispheres 75.9
2438 Female, age 94, left hemisphere 67.8
2619 Male, age 74, both hemispheres 55.9
2042 Male, age 76, both hemispheres 51.3
2729 Female, age 91, right hemisphere 45.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 42.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.6
Samples: 197

Max nTPM: 154.3
Min nTPM: 5.9
Std nTPM: 27.4
Median nTPM: 37.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 154.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 113.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 111.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 103.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 100.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 99.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 96.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 95.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 93.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 91.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 90.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 170.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 170.3
FF:10169-103B7 60 years, female 232.6
FF:10153-102I9 76 years, female 107.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 492.9
Pig sample Sample description nTPM
Subiculum
nTPM: 492.9
Samples: 4

Max nTPM: 639.7
Min nTPM: 437.3
Sample A Female 639.7
Sample B Female 437.3
Sample C Male 446.4
Sample D Male 448.1
Dorsal hippocampus
nTPM: 468.0
Samples: 4

Max nTPM: 614.5
Min nTPM: 350.4
Sample A Female 614.5
Sample B Female 473.6
Sample C Male 433.4
Sample D Male 350.4
Entorhinal cortex
nTPM: 480.0
Samples: 4

Max nTPM: 524.5
Min nTPM: 451.8
Sample A Female 524.5
Sample B Female 479.7
Sample C Male 451.8
Sample D Male 463.9
Ventral hippocampus
nTPM: 450.0
Samples: 4

Max nTPM: 568.9
Min nTPM: 323.4
Sample A Female 568.9
Sample B Female 323.4
Sample C Male 512.0
Sample D Male 395.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 394.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 377.8
Samples: 4

Max nTPM: 398.2
Min nTPM: 334.2
Sample A Male 334.2
Sample B Male 384.4
Sample C Female 394.4
Sample D Female 398.2
Hippocampal formation
nTPM: 394.9
Samples: 4

Max nTPM: 462.1
Min nTPM: 365.4
Sample A Male 462.1
Sample B Male 381.0
Sample C Female 365.4
Sample D Female 371.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.7
77454654 Antisense, RP_070129_01_B11, Mouse strain C57BL/6J (56 days, male) 20.9
89 Antisense, RP_040324_01_E06, Mouse strain C57BL/6J (56 days, male) 10.6
90 Antisense, RP_040324_01_E06, Mouse strain C57BL/6J (56 days, male) 5.3

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