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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CRIP1 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
466.2
Number of samples
349
Samples
Sample
Description
TPM
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1780.8
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1649.7
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1601.1
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1583.5
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1499.5
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
1489.7
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
1487.9
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
1478.6
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1475.1
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
1446.6
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
1436.1
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
1411.0
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
1388.1
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
1381.5
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
1380.4
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
1368.2
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
1360.5
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
1346.5
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
1324.7
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
1290.6
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
1281.7
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
1272.7
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
1271.4
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
1266.6
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
1207.7
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1199.5
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
1194.1
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1112.0
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
1110.8
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1106.3
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1093.0
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
1070.2
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1067.2
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1048.1
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
1031.2
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1014.8
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
1001.6
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
997.1
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
984.5
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
982.0
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
981.7
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
975.2
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
962.4
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
961.8
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
956.4
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
944.8
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
942.1
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
930.5
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
881.3
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
871.1
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
851.8
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
850.6
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
826.3
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
807.7
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
804.9
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
789.2
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
786.5
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
786.2
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
771.8
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
763.5
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
752.4
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
705.2
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
704.8
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
699.6
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
698.9
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
697.6
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
683.6
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
674.5
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
668.4
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
667.1
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
662.0
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
657.6
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
657.4
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
656.5
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
650.3
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
649.0
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
639.4
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
636.3
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
635.4
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
626.7
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
618.3
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
617.1
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
615.8
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
614.9
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
614.5
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
610.0
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
597.3
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
588.2
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
586.4
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
581.1
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
577.4
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
576.1
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
575.9
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
574.8
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
573.1
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
570.6
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
569.6
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
566.3
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
560.6
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
554.4
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
551.1
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
543.7
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
542.2
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
541.8
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
541.2
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
539.9
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
533.7
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
531.3
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
531.2
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
526.8
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
523.7
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
519.2
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
512.1
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
509.4
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
501.5
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
499.3
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
497.4
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
496.2
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
495.0
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
493.4
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
490.6
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
483.0
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
482.4
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
477.9
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
475.3
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
473.9
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
473.0
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
471.8
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
471.6
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
471.2
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
467.3
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
467.1
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
466.6
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
465.3
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
463.5
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
460.0
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
456.4
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
455.9
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
454.8
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
454.4
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
453.4
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
452.3
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
451.6
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
451.2
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
448.5
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
447.3
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
445.1
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
444.0
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
442.6
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
433.5
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
427.4
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
425.0
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
423.4
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
423.3
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
423.3
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
417.8
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
417.5
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
416.9
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
416.2
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
413.6
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
413.0
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
406.2
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
400.8
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
399.2
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
397.8
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
395.8
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
395.5
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
394.1
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
390.3
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
386.6
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
386.4
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
383.5
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
382.5
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
381.6
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
377.5
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
376.3
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
374.0
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
372.9
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
371.4
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
368.4
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
367.8
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
367.6
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
366.4
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
364.5
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
363.7
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
362.1
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
359.8
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
359.0
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
356.8
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
356.3
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
353.8
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
352.0
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
351.6
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
351.0
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
349.5
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
349.1
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
348.2
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
347.7
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
345.8
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
345.1
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
344.1
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
341.3
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
339.2
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
338.3
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
336.7
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
334.4
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
328.0
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
318.1
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
316.9
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
311.3
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
310.1
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
308.7
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
308.2
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
306.9
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
306.4
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
302.5
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
298.7
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
295.7
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
295.0
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
292.5
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
292.4
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
292.0
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
291.0
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
289.6
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
287.5
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
284.8
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
284.8
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
283.7
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
282.5
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
279.7
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
275.7
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
271.8
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
271.1
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
270.5
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
268.3
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
267.3
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
263.6
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
262.8
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
261.3
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
259.3
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
257.8
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
256.1
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
255.3
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
249.9
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
248.2
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
243.6
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
243.3
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
239.2
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
238.8
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
236.8
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
233.8
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
223.5
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
222.5
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
221.5
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
218.5
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
218.5
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
216.1
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
215.8
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
209.0
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
208.7
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
207.8
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
207.2
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
206.9
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
205.3
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
198.7
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
198.6
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
197.5
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
195.4
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
184.2
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
183.0
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
181.5
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
178.8
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
177.6
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
173.0
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
172.9
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
172.6
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
171.5
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
165.5
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
165.1
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
160.1
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
159.5
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
158.7
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
158.3
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
154.5
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
154.1
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
148.8
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
147.0
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
144.5
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
138.5
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
134.8
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
132.7
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
132.3
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
130.6
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
122.3
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
119.2
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
111.1
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
111.1
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
110.0
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
107.9
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
107.3
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
103.6
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
102.8
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
101.3
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
99.6
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
98.7
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
95.8
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
94.8
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
90.5
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
88.9
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
86.2
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
74.6
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
73.1
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
67.6
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
64.2
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
62.4
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
61.9
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
61.6
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
61.5
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
61.2
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
57.3
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
54.5
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
52.9
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
50.2
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
49.2
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
44.5
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
44.4
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
44.0
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
34.9
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
34.5
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
32.1
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
28.6
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
26.6
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
26.5
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
23.9
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
21.0
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
19.1
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
16.6
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
15.6
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
14.6
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
11.4
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
10.5
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
10.2
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
9.6
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
9.5
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
9.4
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
9.3
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
9.0
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
8.7
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CRIP1 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
793.6
Number of samples
81
Samples
Sample
Description
TPM
DO46366
0 years, female, NA, stage:III, dead, 2054 days
4095.5
DO46350
0 years, female, NA, stage:III, dead, 886 days
3926.9
DO46342
0 years, female, NA, stage:III, dead, 1398 days
3422.9
DO46576
0 years, female, NA, stage:III, alive, 133 days
2921.8
DO46331
0 years, female, NA, stage:III, dead, 612 days
1910.9
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
1601.9
DO46368
0 years, female, NA, stage:III, dead, 2879 days
1562.8
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1443.5
DO46348
0 years, female, NA, stage:IV, dead, 287 days
1439.6
DO46364
0 years, female, NA, stage:III, dead, 806 days
1280.0
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1265.5
DO46356
0 years, female, NA, stage:III, dead, 911 days
1218.6
DO46566
0 years, female, NA, stage:III, dead, 673 days
1180.2
DO46354
0 years, female, NA, stage:III, dead, 843 days
1134.6
DO46463
0 years, female, NA, stage:III, dead, 2451 days
1091.1
DO46392
0 years, female, NA, stage:III, dead, 628 days
1085.1
DO46374
0 years, female, NA, stage:III, dead, 1409 days
1078.5
DO46533
0 years, female, NA, stage:III, alive, 3667 days
1077.2
DO46333
0 years, female, NA, stage:III, dead, 359 days
1024.1
DO46571
0 years, female, NA, stage:III, dead, 243 days
1003.2
DO46384
0 years, female, NA, stage:III, dead, 614 days
989.1
DO46560
0 years, female, NA, stage:IV, dead, 286 days
936.3
DO46372
0 years, female, NA, stage:III, dead, 1326 days
835.9
DO46390
0 years, female, NA, stage:III, dead, 374 days
833.0
DO46561
0 years, female, NA, stage:III, dead, 195 days
828.5
DO46468
0 years, female, NA, stage:III, alive, 2776 days
790.0
DO46597
0 years, female, NA, stage:III, dead, 393 days
789.7
DO46344
0 years, female, NA, stage:III, dead, 642 days
779.8
DO46551
0 years, female, NA, stage:III, dead, 1055 days
741.5
DO46432
0 years, female, NA, stage:III, alive, 2218 days
726.6
DO46538
0 years, female, NA, stage:III, dead, 1527 days
724.7
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
723.7
DO46400
0 years, female, NA, stage:III, dead, 719 days
721.9
DO46388
0 years, female, NA, stage:III, dead, 413 days
678.8
DO46611
0 years, female, NA, stage:III, dead, 734 days
657.3
DO46370
0 years, female, NA, stage:III, dead, 1727 days
652.7
DO46358
0 years, female, NA, stage:III, dead, 423 days
639.6
DO46586
0 years, female, NA, stage:III, dead, 1019 days
633.8
DO46508
0 years, female, NA, stage:III, dead, 2101 days
629.2
DO46332
0 years, female, NA, stage:III, dead, 689 days
617.5
DO46581
0 years, female, NA, stage:III, dead, 408 days
616.2
DO46382
0 years, female, NA, stage:IV, dead, 311 days
605.8
DO46340
0 years, female, NA, stage:III, dead, 616 days
600.3
DO46330
0 years, female, NA, stage:III, dead, 684 days
591.1
DO46408
0 years, female, NA, stage:III, dead, 489 days
589.1
DO46398
0 years, female, NA, stage:III, alive, 437 days
558.4
DO46378
0 years, female, NA, stage:III, alive, 843 days
546.8
DO46386
0 years, female, NA, stage:III, dead, 1162 days
538.5
DO46453
0 years, female, NA, stage:III, dead, 3294 days
536.1
DO46448
0 years, female, NA, stage:III, dead, 654 days
527.4
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
519.1
DO46352
0 years, female, NA, stage:III, dead, 677 days
492.6
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
486.2
DO46326
0 years, female, NA, stage:III, dead, 701 days
480.7
DO46402
0 years, female, NA, stage:III, dead, 511 days
478.6
DO46568
0 years, female, NA, stage:III, dead, 320 days
470.6
DO46493
0 years, female, NA, stage:IV, alive, 839 days
465.7
DO46591
0 years, female, NA, stage:III, dead, 195 days
456.8
DO46346
0 years, female, NA, stage:III, dead, 1187 days
453.3
DO46325
0 years, female, NA, stage:III, dead, 477 days
450.5
DO46329
0 years, female, NA, stage:III, dead, 1699 days
442.1
DO46327
0 years, female, NA, stage:III, dead, 184 days
425.6
DO46362
0 years, female, NA, stage:III, dead, 1639 days
406.8
DO46334
0 years, female, NA, stage:III, dead, 496 days
378.2
DO46528
0 years, female, NA, stage:III, alive, 6139 days
280.2
DO46338
0 years, female, NA, stage:III, dead, 596 days
268.2
DO46546
0 years, female, NA, stage:III, dead, 1889 days
248.9
DO46396
0 years, female, NA, stage:III, dead, 583 days
234.4
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
226.7
DO46380
0 years, female, NA, stage:III, dead, 1423 days
209.4
DO46443
0 years, female, NA, stage:III, dead, 2464 days
172.2
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
161.2
DO46328
0 years, female, NA, stage:III, dead, 972 days
152.3
DO46436
0 years, female, NA, stage:III, alive, 3193 days
115.2
DO46518
0 years, female, NA, stage:III, alive, 2960 days
112.7
DO46336
0 years, female, NA, stage:IV, dead, 664 days
104.3
DO46412
0 years, female, NA, stage:III, dead, 597 days
65.6
DO46588
0 years, female, NA, stage:III, dead, 438 days
40.7
DO46602
0 years, female, NA, stage:III, dead, 205 days
31.1
DO46404
0 years, female, NA, stage:III, dead, 690 days
29.7
DO46606
0 years, female, NA, stage:III, alive, 804 days
24.6
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OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
161317f3-1a39-438e-af45-cd2502_D2
Tumor
2.8
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
2.5
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
2.4
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
2.2
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
2.1
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
2.1
285fed94-1495-448e-879b-b55de9_D2
Tumor
2.0
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
1.8
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
1.7
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
1.7
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
1.6
e9d416e7-f661-400a-896e-388545_D2
Tumor
1.6
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
1.6
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
1.4
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
1.4
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
1.4
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
1.4
1a10c200-3895-4648-b951-94f99f_D2
Tumor
1.3
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
1.2
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
1.2
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
1.2
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
1.2
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
1.1
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
1.1
1772e913-f62e-446a-8cf3-720348_D2
Tumor
1.1
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
1.1
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
1.1
10c2d629-0287-4511-ac25-f29031_D2
Tumor
1.1
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
1.1
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
1.0
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
1.0
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
1.0
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
1.0
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
1.0
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
1.0
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.9
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.9
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.9
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.9
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.9
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
0.8
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.8
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.8
15524912-685a-47ce-a824-567848_D2
Tumor
0.8
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.8
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
0.7
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.7
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.7
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.7
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.7
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.7
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.7
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.7
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.6
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.6
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.6
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.6
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.6
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.6
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.6
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.5
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.5
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.5
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.5
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.4
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
0.4
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.4
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.4
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.4
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
0.4
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.4
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
0.4
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
0.4
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.3
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.3
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.3
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.3
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.3
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.2
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
0.2
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.1
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
0.1
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.1
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.1
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.0
21efd60f-6a31-4b98-9477-16a905_D2
Normal
0.0
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.0
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.0
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
0.0
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
0.0
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.0
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.1
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.1
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.1
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.2
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-0.2
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-0.2
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.3
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.3
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.3
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.4
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.4
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-0.5
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.5
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.7
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-1.0
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-1.0
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-1.1
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.