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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPX3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
756.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
2659.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
2635.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2287.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
2104.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1833.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
1510.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1427.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
1427.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1423.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1347.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1289.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
1259.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
1228.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1216.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
1196.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1178.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
1139.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
1096.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
973.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
938.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
936.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
901.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
739.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
726.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
721.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
676.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
614.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
610.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
575.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
567.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
562.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
543.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
524.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
505.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
484.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
456.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
453.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
446.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
443.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
441.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
440.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
437.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
430.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
412.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
410.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
405.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
384.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
353.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
344.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
271.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
265.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
256.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
251.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
223.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
217.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
217.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
215.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
211.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
124.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
119.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
108.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
91.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
50.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPX3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1964.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20361.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17354.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11510.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10075.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9967.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
9586.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
9025.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8595.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
8306.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7938.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7828.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
7452.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7208.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7051.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
6740.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
6653.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
6538.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
6457.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
6404.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
6368.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
6094.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
5997.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
5936.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
5751.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
5608.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
5528.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5322.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5291.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
5252.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5055.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
5018.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
4921.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
4907.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
4857.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
4813.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4774.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
4712.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
4706.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
4685.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
4619.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
4592.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
4541.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
4458.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
4456.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
4429.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
4298.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
4279.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
4251.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4184.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
4095.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
4014.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3895.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
3889.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
3882.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
3836.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
3771.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
3768.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
3676.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
3674.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
3566.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
3562.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
3524.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
3507.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
3491.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
3486.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3445.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
3439.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
3435.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
3371.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
3367.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
3366.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
3350.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
3345.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
3342.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
3336.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3336.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
3274.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3237.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
3231.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
3227.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
3224.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3194.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3140.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
3138.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
3100.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
3093.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
3027.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
2982.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
2965.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
2941.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
2924.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
2919.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
2867.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
2867.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
2851.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2823.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
2823.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2809.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
2802.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
2800.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
2795.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
2792.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2770.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
2719.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
2710.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
2698.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
2686.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
2649.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
2647.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
2641.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
2641.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
2613.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
2606.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
2592.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
2576.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2560.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
2559.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
2556.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
2549.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
2542.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
2502.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
2499.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
2446.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
2428.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
2425.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
2418.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
2390.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
2366.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
2359.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
2358.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
2358.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
2343.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
2338.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
2314.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2294.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
2282.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
2281.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
2270.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2240.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
2224.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
2212.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
2195.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
2184.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
2181.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
2157.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
2157.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
2148.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
2141.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
2139.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
2136.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
2128.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
2128.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
2112.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
2109.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
2108.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
2099.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
2098.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
2097.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
2095.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
2095.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
2094.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
2092.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
2090.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
2074.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
2065.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
2046.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
2037.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
2027.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
2019.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
2016.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
2005.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
2001.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
2001.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
1985.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
1967.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
1958.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
1957.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
1946.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
1943.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
1938.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
1929.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
1922.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
1917.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
1908.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
1888.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1880.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
1861.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
1860.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1849.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
1845.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
1844.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
1840.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
1839.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
1832.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
1819.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1801.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
1793.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
1790.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
1776.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
1772.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
1746.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
1746.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
1742.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
1740.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
1731.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
1725.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
1710.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
1707.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
1705.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
1701.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
1694.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
1684.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
1680.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
1672.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
1667.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
1654.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
1647.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
1643.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
1641.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
1632.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
1622.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
1621.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
1621.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
1611.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
1607.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
1606.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
1595.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
1594.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
1581.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
1576.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
1574.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
1572.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
1568.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
1554.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
1545.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
1544.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
1536.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
1535.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
1535.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
1532.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
1531.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1518.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
1506.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
1505.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
1499.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
1496.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
1496.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
1490.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
1489.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
1484.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
1482.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
1477.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
1476.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
1465.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
1462.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
1456.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
1455.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
1455.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
1454.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1438.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1438.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
1437.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
1435.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
1434.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
1430.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
1429.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
1425.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
1424.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
1417.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
1415.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
1406.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
1391.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
1391.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
1385.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
1382.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
1373.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
1369.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
1368.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
1363.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
1361.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
1354.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
1353.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
1350.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
1335.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
1335.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
1334.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
1318.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
1316.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
1311.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
1308.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
1307.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
1305.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
1299.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
1291.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
1286.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1282.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
1278.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
1277.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
1267.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
1266.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
1264.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
1259.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
1247.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
1243.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
1235.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1230.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
1230.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
1222.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
1208.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
1197.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
1196.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
1195.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
1195.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
1194.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
1193.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
1189.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
1188.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
1179.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
1165.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
1165.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
1158.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
1156.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
1153.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
1151.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1149.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
1145.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
1139.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
1138.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
1137.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
1127.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
1124.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
1124.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
1121.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
1113.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
1107.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
1103.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
1101.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
1099.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
1098.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
1096.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
1094.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
1091.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
1070.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
1066.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1065.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
1061.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
1060.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
1054.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
1050.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
1028.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1028.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1026.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
1021.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
1021.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
1017.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
1016.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
1011.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
1009.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
995.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
988.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
973.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
972.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
971.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
969.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
965.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
964.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
961.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
959.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
956.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
952.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
951.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
949.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
948.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
945.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
932.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
926.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
921.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
915.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
908.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
892.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
891.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
887.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
887.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
885.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
882.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
881.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
879.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
877.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
876.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
876.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
874.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
867.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
865.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
861.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
854.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
853.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
850.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
843.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
838.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
836.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
834.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
834.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
826.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
795.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
784.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
783.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
773.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
772.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
749.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
748.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
745.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
743.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
742.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
731.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
726.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
723.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
723.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
709.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
708.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
704.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
702.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
677.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
672.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
669.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
658.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
651.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
650.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
647.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
643.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
643.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
632.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
631.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
630.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
623.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
615.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
613.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
609.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
604.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
600.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
596.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
585.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
583.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
582.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
575.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
569.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
568.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
565.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
565.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
563.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
558.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
555.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
548.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
543.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
540.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
539.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
536.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
535.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
517.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
506.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
506.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
496.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
495.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
492.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
488.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
476.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
473.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
473.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
464.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
448.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
447.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
442.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
442.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
436.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
434.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
429.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
426.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
398.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
394.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
385.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
375.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
364.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
355.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
352.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
340.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
335.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
331.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
325.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
325.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
321.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
307.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
298.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
297.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
294.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
285.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
282.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
278.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
260.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
239.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
209.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
199.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
193.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
191.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
189.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
177.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
171.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
166.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
162.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
159.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
157.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
143.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
132.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
110.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
107.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
102.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
93.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
92.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
59.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
58.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
44.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
38.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPX3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1691.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7775.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
7406.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
5837.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
5382.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
4926.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
4759.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
4468.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
3914.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
3485.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
3457.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
3375.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
3360.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
3290.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
3253.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
3104.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
3102.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
3028.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
2890.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
2716.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
2650.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
2622.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
2562.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
2267.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
2253.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
2202.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
2149.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
2120.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
2115.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
2087.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
2086.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
2075.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
1942.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
1851.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
1851.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
1815.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
1793.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
1717.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
1670.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
1502.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
1498.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
1441.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
1407.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
1406.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
1389.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
1367.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
1354.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
1317.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
1306.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
1250.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
1223.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
1212.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
1206.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
1198.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
1163.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1101.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
1076.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
1054.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
1053.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
1029.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
1025.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
1000.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
986.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
953.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
919.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
889.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
882.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
876.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
824.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
817.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
787.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
784.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
781.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
768.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
692.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
675.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
664.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
629.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
618.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
565.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
558.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
553.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
535.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
535.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
533.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
495.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
468.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
467.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
435.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
376.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
364.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
340.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
319.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
290.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
196.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
195.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
144.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
121.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPX3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
921.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
12282.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10079.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
8493.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
6547.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6035.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
5211.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5096.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5087.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
4475.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
3929.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3656.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
3324.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
3276.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
3150.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
3133.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
3128.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
2861.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
2836.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
2755.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2697.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
2695.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
2689.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
2601.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
2547.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
2483.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2405.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
2379.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2334.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
2334.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
2305.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
2211.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
2178.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
2132.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
2095.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
2085.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
2044.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
1986.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
1969.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
1960.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
1923.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1834.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1826.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
1796.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1740.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
1661.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
1627.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
1627.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
1583.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1531.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
1502.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
1493.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
1404.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1394.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
1379.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
1376.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
1346.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
1298.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
1290.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1282.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
1238.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
1233.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
1228.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
1228.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1209.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
1191.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
1178.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
1155.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
1152.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1141.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
1123.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1122.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
1122.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
1060.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
1039.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1031.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
1003.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
991.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
987.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
957.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
937.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
931.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
926.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
886.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
882.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
881.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
879.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
864.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
834.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
819.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
818.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
816.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
790.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
779.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
751.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
751.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
749.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
747.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
745.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
738.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
712.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
689.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
674.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
673.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
659.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
645.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
639.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
628.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
592.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
587.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
583.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
579.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
578.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
566.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
559.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
556.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
542.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
538.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
538.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
533.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
519.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
506.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
501.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
501.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
497.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
497.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
496.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
493.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
490.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
477.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
474.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
474.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
474.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
472.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
456.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
456.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
433.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
432.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
421.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
416.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
413.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
409.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
402.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
399.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
397.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
394.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
392.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
392.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
390.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
382.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
366.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
364.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
353.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
350.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
349.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
349.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
348.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
345.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
328.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
326.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
321.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
320.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
304.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
301.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
298.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
296.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
290.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
278.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
278.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
276.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
273.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
271.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
270.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
269.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
267.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
267.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
266.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
265.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
261.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
259.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
252.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
250.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
247.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
247.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
243.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
236.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
235.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
235.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
232.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
220.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
219.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
216.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
215.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
215.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
211.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
210.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
210.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
207.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
200.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
196.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
189.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
188.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
186.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
180.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
179.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
178.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
176.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
175.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
174.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
172.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
171.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
171.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
167.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
163.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
161.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
160.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
158.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
155.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
155.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
154.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
154.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
152.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
151.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
149.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
148.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
144.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
139.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
138.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
137.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
136.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
125.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
125.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
123.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
122.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
120.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
120.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
119.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
119.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
118.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
118.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
116.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
116.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
115.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
112.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
111.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
109.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
108.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
108.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
105.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
104.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
96.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
95.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
93.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
91.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
90.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
88.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
88.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
88.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
83.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
81.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
80.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
79.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
76.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
68.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
66.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
65.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
62.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
61.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
60.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
56.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
54.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
53.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
53.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
48.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
45.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
44.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
37.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
30.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
22.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
16.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
11.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0006730001
Normal
1.4
CPT0026420001
Normal
1.3
CPT0077140001
Normal
1.3
CPT0088920001
Normal
1.3
CPT0012770003
Normal
1.3
CPT0006950001
Normal
1.3
CPT0000890001
Normal
1.2
CPT0020130001
Normal
1.2
CPT0065450001
Normal
1.2
CPT0020020001
Normal
1.2
CPT0000790001
Normal
1.2
CPT0025060001
Normal
1.1
CPT0077500001
Normal
1.1
CPT0012290003
Normal
1.0
CPT0066430001
Normal
1.0
CPT0023710001
Normal
1.0
CPT0092800003
Normal
1.0
CPT0010170001
Normal
0.9
CPT0065820001
Normal
0.9
CPT0089480003
Normal
0.9
CPT0001350001
Normal
0.9
CPT0088710001
Normal
0.9
CPT0014350001
Normal
0.9
CPT0023360001
Normal
0.9
CPT0088780001
Normal
0.9
CPT0012090003
Normal
0.9
CPT0092310003
Normal
0.9
CPT0024680001
Normal
0.8
CPT0082010001
Normal
0.8
CPT0086370003
Normal
0.8
CPT0078530001
Normal
0.8
CPT0092740003
Normal
0.8
CPT0009080003
Normal
0.8
CPT0025610001
Normal
0.8
CPT0078840001
Normal
0.7
CPT0089040001
Normal
0.7
CPT0087050003
Normal
0.7
CPT0086970003
Normal
0.7
CPT0018250001
Normal
0.7
CPT0069010001
Normal
0.6
CPT0076350001
Normal
0.6
CPT0007870001
Normal
0.6
CPT0006530001
Normal
0.6
CPT0078940001
Normal
0.6
CPT0079430001
Normal
0.6
CPT0075570001
Normal
0.6
CPT0001190001
Normal
0.6
CPT0019160001
Normal
0.6
CPT0066520001
Normal
0.6
CPT0012570003
Normal
0.6
CPT0025920001
Normal
0.6
CPT0007470001
Normal
0.5
CPT0063640001
Normal
0.5
CPT0013790003
Normal
0.5
CPT0017450001
Normal
0.5
CPT0081620001
Normal
0.5
CPT0012920003
Normal
0.5
CPT0078670001
Normal
0.5
CPT0079000001
Normal
0.5
CPT0001510001
Normal
0.5
CPT0063330001
Normal
0.4
CPT0014130001
Normal
0.4
CPT0088500001
Normal
0.4
CPT0086890003
Normal
0.4
CPT0000660001
Normal
0.4
CPT0088570001
Normal
0.4
CPT0001270001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0009020003
Normal
0.3
CPT0064400001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0075170001
Normal
0.2
CPT0088640003
Normal
0.1
CPT0077320001
Normal
0.1
CPT0076330003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0010120001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0069190001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0084560003
Tumor
-0.3
CPT0079510001
Normal
-0.4
CPT0012900004
Tumor
-0.6
CPT0077310003
Tumor
-0.6
CPT0063320003
Tumor
-0.6
CPT0002270011
Tumor
-0.6
CPT0015910003
Tumor
-0.6
CPT0019990003
Tumor
-0.7
CPT0014160003
Tumor
-0.7
CPT0078510003
Tumor
-0.7
CPT0011240003
Tumor
-0.7
CPT0066480003
Tumor
-0.7
CPT0075560003
Tumor
-0.8
CPT0079300001
Normal
-0.8
CPT0001500009
Tumor
-0.8
CPT0078800003
Tumor
-0.8
CPT0012640003
Normal
-0.8
CPT0081990003
Tumor
-0.9
CPT0066470004
Tumor
-1.0
CPT0087040003
Tumor
-1.0
CPT0075720003
Tumor
-1.0
CPT0092290003
Tumor
-1.0
CPT0001220008
Tumor
-1.0
CPT0020120003
Tumor
-1.0
CPT0001540009
Tumor
-1.0
CPT0023690003
Tumor
-1.1
CPT0063630003
Tumor
-1.1
CPT0006900003
Tumor
-1.1
CPT0017850003
Tumor
-1.1
CPT0000780007
Tumor
-1.1
CPT0077490003
Tumor
-1.2
CPT0021240003
Tumor
-1.2
CPT0069000003
Tumor
-1.2
CPT0065430003
Tumor
-1.2
CPT0089020003
Tumor
-1.2
CPT0064370003
Tumor
-1.2
CPT0012550003
Tumor
-1.2
CPT0009060003
Tumor
-1.2
CPT0088760003
Tumor
-1.2
CPT0025580004
Tumor
-1.2
CPT0019130003
Tumor
-1.3
CPT0009000003
Tumor
-1.3
CPT0086360003
Tumor
-1.3
CPT0012280003
Tumor
-1.3
CPT0065930003
Tumor
-1.3
CPT0079480003
Tumor
-1.4
CPT0065810003
Tumor
-1.4
CPT0002350011
Tumor
-1.4
CPT0065870003
Tumor
-1.4
CPT0007860003
Tumor
-1.4
CPT0075130003
Tumor
-1.4
CPT0071150004
Tumor
-1.4
CPT0007320003
Tumor
-1.4
CPT0001260009
Tumor
-1.4
CPT0089460004
Tumor
-1.4
CPT0017410003
Tumor
-1.4
CPT0086030003
Tumor
-1.4
CPT0081600003
Tumor
-1.5
CPT0026410003
Tumor
-1.5
CPT0010110003
Tumor
-1.5
CPT0069160003
Tumor
-1.5
CPT0006440003
Tumor
-1.5
CPT0012670003
Tumor
-1.5
CPT0079180003
Tumor
-1.5
CPT0092790003
Tumor
-1.5
CPT0000640003
Tumor
-1.5
CPT0079270003
Tumor
-1.5
CPT0088480003
Tumor
-1.5
CPT0000870016
Tumor
-1.5
CPT0078830003
Tumor
-1.5
CPT0023350003
Tumor
-1.5
CPT0010160003
Tumor
-1.5
CPT0012080003
Tumor
-1.5
CPT0025050003
Tumor
-1.5
CPT0079230003
Tumor
-1.5
CPT0014370004
Tumor
-1.6
CPT0092730003
Tumor
-1.6
CPT0078930003
Tumor
-1.6
CPT0088630003
Tumor
-1.6
CPT0024670003
Tumor
-1.6
CPT0088970003
Tumor
-1.6
CPT0088900003
Tumor
-1.6
CPT0065690003
Tumor
-1.7
CPT0025880003
Tumor
-1.7
CPT0088690003
Tumor
-1.7
CPT0065750003
Tumor
-1.7
CPT0092160003
Tumor
-1.7
CPT0001180009
Tumor
-1.7
CPT0025110003
Tumor
-1.7
CPT0012370003
Tumor
-1.7
CPT0006630003
Tumor
-1.8
CPT0025290003
Tumor
-1.8
CPT0086820003
Tumor
-1.8
CPT0079410003
Tumor
-1.8
CPT0015810003
Tumor
-1.8
CPT0086870003
Tumor
-1.8
CPT0085670003
Tumor
-1.9
CPT0078660003
Tumor
-1.9
CPT0012180003
Tumor
-2.1
CPT0001340003
Tumor
-2.1
CPT0077110003
Tumor
-2.1
CPT0079380003
Tumor
-2.1
CPT0081880003
Tumor
-2.2
CPT0088550004
Tumor
-2.3
CPT0078990003
Tumor
-2.3
CPT0086950003
Tumor
-2.3
CPT0014450004
Tumor
-2.3
CPT0015730003
Tumor
-2.3
CPT0025350003
Tumor
-2.4
CPT0025230003
Tumor
-2.4
CPT0011410003
Tumor
-2.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.