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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CFI is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
72.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
21.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
19.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
15.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
11.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
10.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
10.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
9.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
7.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
7.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
6.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
6.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
5.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
4.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
4.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
3.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
3.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
3.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
2.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
1.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CFI is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
92.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
524.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
430.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
429.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
308.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
306.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
279.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
275.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
269.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
258.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
258.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
253.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
244.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
235.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
231.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
229.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
228.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
228.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
228.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
212.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
210.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
207.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
206.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
205.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
201.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
199.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
197.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
196.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
195.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
193.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
192.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
191.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
189.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
188.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
188.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
187.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
183.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
180.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
180.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
178.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
177.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
175.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
175.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
175.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
174.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
172.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
171.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
170.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
169.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
168.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
167.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
166.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
165.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
165.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
165.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
165.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
163.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
163.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
162.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
162.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
162.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
160.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
158.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
157.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
157.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
157.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
153.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
153.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
153.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
153.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
152.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
151.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
150.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
149.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
147.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
147.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
147.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
147.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
146.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
145.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
145.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
145.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
143.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
141.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
141.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
141.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
140.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
138.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
138.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
137.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
137.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
137.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
136.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
136.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
135.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
135.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
134.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
134.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
134.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
132.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
131.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
130.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
129.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
129.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
128.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
128.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
128.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
128.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
126.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
126.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
126.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
126.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
125.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
125.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
125.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
122.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
122.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
122.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
122.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
121.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
121.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
120.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
119.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
118.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
117.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
117.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
117.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
117.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
117.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
117.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
117.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
117.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
116.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
116.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
116.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
115.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
115.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
115.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
114.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
114.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
114.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
112.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
112.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
112.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
112.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
111.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
111.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
110.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
110.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
110.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
110.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
109.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
109.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
109.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
108.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
108.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
108.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
107.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
107.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
106.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
105.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
105.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
105.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
104.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
104.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
104.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
103.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
103.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
103.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
103.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
103.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
103.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
103.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
102.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
102.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
102.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
101.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
101.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
100.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
100.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
100.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
100.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
100.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
100.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
100.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
99.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
98.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
98.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
97.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
97.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
97.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
96.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
95.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
95.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
94.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
94.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
94.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
94.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
93.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
93.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
93.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
93.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
93.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
93.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
92.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
91.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
91.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
91.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
91.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
91.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
91.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
91.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
90.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
90.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
90.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
90.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
89.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
89.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
89.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
89.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
89.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
89.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
88.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
88.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
88.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
88.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
88.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
88.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
88.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
87.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
87.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
87.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
87.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
87.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
86.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
86.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
86.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
86.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
86.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
85.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
85.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
85.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
85.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
85.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
85.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
85.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
85.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
85.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
84.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
84.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
84.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
84.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
84.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
84.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
84.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
84.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
84.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
83.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
83.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
83.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
83.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
83.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
83.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
83.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
82.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
82.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
82.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
82.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
81.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
81.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
81.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
81.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
80.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
80.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
80.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
80.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
79.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
79.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
79.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
79.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
78.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
78.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
77.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
77.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
77.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
77.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
76.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
76.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
76.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
76.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
75.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
75.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
75.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
75.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
75.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
75.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
74.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
74.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
74.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
74.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
73.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
73.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
72.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
72.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
72.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
72.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
72.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
71.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
71.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
71.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
71.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
71.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
71.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
70.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
70.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
70.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
70.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
70.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
69.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
69.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
69.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
69.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
68.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
68.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
68.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
68.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
68.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
68.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
68.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
68.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
68.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
68.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
68.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
68.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
68.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
68.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
67.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
67.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
67.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
67.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
66.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
66.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
66.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
66.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
65.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
65.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
65.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
65.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
65.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
65.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
65.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
64.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
64.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
64.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
64.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
64.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
64.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
64.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
64.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
63.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
63.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
62.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
62.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
62.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
61.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
61.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
60.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
59.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
59.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
59.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
58.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
58.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
58.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
58.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
58.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
57.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
57.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
57.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
56.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
56.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
56.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
56.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
55.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
55.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
55.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
55.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
55.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
54.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
53.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
53.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
53.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
53.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
52.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
52.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
52.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
52.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
51.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
51.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
51.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
51.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
51.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
51.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
50.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
50.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
50.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
50.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
49.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
49.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
49.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
49.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
49.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
48.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
48.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
48.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
47.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
47.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
47.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
46.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
46.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
46.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
46.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
45.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
44.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
44.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
43.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
43.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
43.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
42.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
42.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
42.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
42.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
42.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
42.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
41.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
41.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
40.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
39.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
39.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
39.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
39.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
38.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
37.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
37.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
37.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
36.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
36.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
36.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
36.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
35.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
35.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
35.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
35.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
35.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
35.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
34.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
33.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
33.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
32.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
32.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
32.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
32.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
32.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
31.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
31.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
31.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
31.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
31.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
30.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
29.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
29.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
29.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
29.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
27.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
26.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
26.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
26.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
25.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
24.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
24.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
24.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
22.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
22.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
22.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
21.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
21.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
14.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
14.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
13.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
13.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
11.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
11.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
6.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
5.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
4.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
4.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CFI is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
136.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
410.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
375.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
369.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
312.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
308.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
307.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
304.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
277.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
261.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
252.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
243.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
239.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
238.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
232.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
230.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
224.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
205.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
200.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
196.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
193.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
193.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
192.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
186.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
183.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
177.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
175.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
173.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
172.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
169.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
169.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
168.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
164.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
163.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
161.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
160.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
160.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
150.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
145.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
144.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
136.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
135.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
134.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
132.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
131.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
120.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
119.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
118.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
116.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
115.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
114.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
113.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
110.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
109.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
107.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
107.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
105.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
105.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
104.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
102.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
102.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
102.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
100.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
99.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
99.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
99.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
98.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
95.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
91.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
90.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
87.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
86.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
86.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
85.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
83.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
80.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
77.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
77.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
77.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
76.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
75.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
73.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
72.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
67.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
66.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
55.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
52.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
49.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
46.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
45.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
43.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
42.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
40.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
38.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
37.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
32.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CFI is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
121.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
787.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
680.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
576.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
312.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
311.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
288.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
282.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
282.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
268.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
267.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
266.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
257.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
250.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
247.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
244.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
242.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
242.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
242.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
242.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
241.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
233.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
233.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
229.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
222.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
220.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
218.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
216.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
215.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
214.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
213.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
210.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
210.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
205.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
204.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
203.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
201.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
200.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
200.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
200.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
198.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
195.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
190.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
190.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
189.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
188.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
188.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
185.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
185.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
184.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
180.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
180.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
180.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
179.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
178.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
178.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
178.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
177.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
177.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
176.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
175.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
175.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
175.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
174.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
174.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
174.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
174.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
173.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
171.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
171.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
171.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
170.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
167.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
164.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
164.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
163.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
161.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
160.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
158.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
158.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
158.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
157.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
156.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
155.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
154.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
153.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
153.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
150.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
149.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
148.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
147.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
146.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
145.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
144.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
143.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
143.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
141.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
141.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
140.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
140.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
140.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
140.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
140.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
139.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
138.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
136.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
136.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
135.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
135.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
135.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
133.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
133.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
132.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
131.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
131.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
130.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
130.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
127.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
127.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
126.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
126.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
124.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
124.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
120.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
119.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
118.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
118.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
117.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
117.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
116.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
116.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
113.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
112.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
112.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
111.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
110.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
107.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
106.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
106.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
105.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
105.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
105.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
105.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
104.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
104.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
104.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
103.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
103.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
102.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
101.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
101.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
100.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
100.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
99.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
98.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
97.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
97.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
96.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
96.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
94.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
94.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
93.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
93.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
92.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
90.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
89.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
88.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
87.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
85.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
84.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
84.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
83.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
82.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
82.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
82.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
82.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
81.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
80.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
80.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
80.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
79.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
78.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
78.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
78.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
78.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
78.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
77.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
77.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
77.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
77.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
76.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
75.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
75.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
74.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
73.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
71.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
71.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
71.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
71.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
70.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
70.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
69.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
69.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
68.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
68.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
67.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
67.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
66.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
66.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
65.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
65.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
64.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
64.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
64.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
64.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
64.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
64.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
63.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
61.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
61.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
61.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
60.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
60.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
59.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
59.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
59.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
58.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
58.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
57.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
55.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
55.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
52.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
52.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
50.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
49.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
47.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
47.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
45.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
44.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
44.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
41.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
41.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
40.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
40.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
39.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
39.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
38.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
37.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
37.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
36.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
36.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
36.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
36.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
35.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
34.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
32.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
31.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
30.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
28.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
27.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
26.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
24.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
21.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
21.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
21.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
20.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
18.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
16.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
14.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
13.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
8.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
8.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
7.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
6.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
2.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
1.9
CPT0063320003
Tumor
1.5
CPT0066480003
Tumor
1.5
CPT0063630003
Tumor
1.4
CPT0000640003
Tumor
1.2
CPT0065930003
Tumor
1.1
CPT0075170001
Normal
1.1
CPT0069190001
Normal
1.0
CPT0084560003
Tumor
1.0
CPT0066520001
Normal
1.0
CPT0089020003
Tumor
1.0
CPT0012550003
Tumor
0.9
CPT0015910003
Tumor
0.9
CPT0079510001
Normal
0.8
CPT0076350001
Normal
0.7
CPT0064370003
Tumor
0.7
CPT0001220008
Tumor
0.7
CPT0019130003
Tumor
0.7
CPT0011410003
Tumor
0.7
CPT0079300001
Normal
0.7
CPT0025110003
Tumor
0.7
CPT0011240003
Tumor
0.7
CPT0001550001
Normal
0.7
CPT0075720003
Tumor
0.7
CPT0077310003
Tumor
0.6
CPT0084590001
Normal
0.6
CPT0009020003
Normal
0.6
CPT0069160003
Tumor
0.6
CPT0081990003
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0000780007
Tumor
0.5
CPT0010120001
Normal
0.5
CPT0087040003
Tumor
0.5
CPT0077320001
Normal
0.4
CPT0088900003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0012570003
Normal
0.4
CPT0089040001
Normal
0.4
CPT0007470001
Normal
0.4
CPT0075130003
Tumor
0.4
CPT0063330001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0018250001
Normal
0.4
CPT0065870003
Tumor
0.4
CPT0088640003
Normal
0.4
CPT0078840001
Normal
0.3
CPT0071150004
Tumor
0.3
CPT0087050003
Normal
0.3
CPT0001350001
Normal
0.3
CPT0006900003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0002370001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0012640003
Normal
0.3
CPT0092190003
Normal
0.3
CPT0012920003
Normal
0.3
CPT0014130001
Normal
0.3
CPT0086970003
Normal
0.3
CPT0017410003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0013790003
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0086890003
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0006730001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0079410003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0023690003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0025060001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0064400001
Normal
-0.2
CPT0012280003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0025170003
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0006950001
Normal
-0.3
CPT0079380003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0078660003
Tumor
-0.3
CPT0023710001
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0010110003
Tumor
-0.3
CPT0012770003
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0023350003
Tumor
-0.3
CPT0077500001
Normal
-0.3
CPT0078930003
Tumor
-0.4
CPT0092160003
Tumor
-0.4
CPT0088500001
Normal
-0.4
CPT0002270011
Tumor
-0.4
CPT0086360003
Tumor
-0.4
CPT0001230001
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0012670003
Tumor
-0.4
CPT0065430003
Tumor
-0.4
CPT0023360001
Normal
-0.4
CPT0066470004
Tumor
-0.5
CPT0001500009
Tumor
-0.5
CPT0015810003
Tumor
-0.5
CPT0089460004
Tumor
-0.5
CPT0086820003
Tumor
-0.5
CPT0025610001
Normal
-0.5
CPT0092740003
Normal
-0.5
CPT0009080003
Normal
-0.5
CPT0065450001
Normal
-0.5
CPT0025580004
Tumor
-0.5
CPT0006630003
Tumor
-0.5
CPT0078940001
Normal
-0.6
CPT0026420001
Normal
-0.6
CPT0000790001
Normal
-0.6
CPT0010170001
Normal
-0.6
CPT0020120003
Tumor
-0.6
CPT0065810003
Tumor
-0.6
CPT0025290003
Tumor
-0.7
CPT0000660001
Normal
-0.7
CPT0010160003
Tumor
-0.7
CPT0014450004
Tumor
-0.7
CPT0001180009
Tumor
-0.7
CPT0086950003
Tumor
-0.7
CPT0079270003
Tumor
-0.7
CPT0024670003
Tumor
-0.8
CPT0012180003
Tumor
-0.8
CPT0009060003
Tumor
-0.8
CPT0078990003
Tumor
-0.9
CPT0001540009
Tumor
-0.9
CPT0077110003
Tumor
-0.9
CPT0078800003
Tumor
-1.0
CPT0079180003
Tumor
-1.0
CPT0015730003
Tumor
-1.0
CPT0026410003
Tumor
-1.2
CPT0088970003
Tumor
-1.3
CPT0088550004
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
