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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LGR4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
84.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
80.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
77.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
76.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
75.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
63.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
61.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
58.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
58.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
56.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
55.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
54.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
54.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
53.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
53.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
52.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
48.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
47.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
46.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
42.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
40.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
39.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
37.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
36.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
36.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
32.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
31.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
30.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
29.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
29.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
28.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
26.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
26.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
26.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
25.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
25.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
25.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
25.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
22.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
22.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
22.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
21.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
19.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
19.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
19.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
17.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
17.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
16.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
16.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
16.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
14.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
13.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
12.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
4.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LGR4 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
135.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
101.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
95.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
85.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
83.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
66.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
61.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
60.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
56.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
56.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
54.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
54.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
54.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
53.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
53.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
52.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
52.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
51.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
50.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
49.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
48.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
47.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
46.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
45.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
45.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
44.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
44.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
43.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
43.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
43.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
43.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
42.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
42.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
42.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
42.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
42.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
41.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
40.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
39.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
39.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
39.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
38.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
38.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
38.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
38.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
38.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
37.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
37.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
37.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
36.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
36.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
36.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
36.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
36.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
36.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
36.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
36.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
35.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
35.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
34.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
34.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
34.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
34.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
34.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
33.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
33.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
33.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
33.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
33.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
33.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
33.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
33.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
33.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
32.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
32.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
32.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
32.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
32.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
32.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
31.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
31.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
31.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
31.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
31.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
31.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
31.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
31.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
31.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
31.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
30.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
30.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
30.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
30.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
30.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
29.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
29.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
29.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
29.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
29.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
29.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
29.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
29.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
29.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
29.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
29.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
29.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
29.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
28.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
28.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
28.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
28.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
28.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
28.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
28.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
28.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
28.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
28.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
28.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
28.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
28.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
27.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
27.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
27.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
27.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
27.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
27.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
27.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
27.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
27.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
26.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
26.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
26.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
26.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
26.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
26.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
26.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
26.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
26.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
26.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
26.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
26.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
25.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
25.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
25.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
25.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
25.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
25.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
25.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
25.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
25.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
25.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
25.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
25.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
24.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
24.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
24.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
24.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
24.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
24.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
24.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
24.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
23.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
23.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
23.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
23.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
23.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
23.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
23.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
23.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
23.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
23.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
23.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
23.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
23.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
23.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
23.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
22.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
22.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
22.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
22.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
22.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
22.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
22.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
22.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
22.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
22.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
22.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
21.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
21.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
21.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
21.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
21.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
21.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
21.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
21.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
21.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
21.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
21.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
21.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
21.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
21.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
21.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
21.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
21.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
21.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
21.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
21.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
21.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
21.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
20.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
20.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
20.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
20.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
20.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
20.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
20.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
20.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
20.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
20.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
20.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
20.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
19.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
19.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
19.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
19.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
19.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
19.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
19.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
19.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
18.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
18.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
18.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
18.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
18.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
18.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
17.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
17.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
17.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
17.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
17.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
17.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
17.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
17.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
17.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
17.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
17.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
16.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
16.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
16.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
16.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
16.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
16.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
16.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
15.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
15.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
15.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
15.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
15.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
14.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
14.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
13.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
13.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
13.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
12.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
12.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
12.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
12.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
12.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
11.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
11.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
10.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
10.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
10.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
9.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
9.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
8.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
8.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
8.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
8.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
7.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
7.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
6.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
6.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
5.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
5.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
4.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
4.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
3.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
3.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
2.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
2.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
1.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LGR4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
55.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
54.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
52.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
52.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
51.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
50.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
49.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
47.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
47.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
46.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
46.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
44.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
43.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
43.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
43.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
42.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
42.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
41.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
41.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
40.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
39.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
38.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
38.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
36.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
36.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
36.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
35.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
34.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
34.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
33.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
33.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
33.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
32.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
32.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
31.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
31.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
31.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
31.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
30.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
30.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
30.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
29.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
29.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
27.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
27.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
27.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
27.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
26.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
26.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
25.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
23.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
23.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
22.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
21.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
21.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
21.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
21.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
20.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
20.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
20.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
20.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
18.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
17.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
16.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
16.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
15.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
15.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
12.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
12.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
11.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
11.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
10.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LGR4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
140.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
102.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
68.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
65.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
64.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
63.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
56.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
56.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
54.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
53.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
52.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
51.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
51.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
49.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
49.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
48.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
45.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
44.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
42.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
42.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
39.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
37.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
37.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
36.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
35.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
34.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
34.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
33.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
33.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
33.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
33.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
32.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
32.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
32.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
32.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
31.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
30.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
30.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
30.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
30.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
30.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
30.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
29.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
29.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
29.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
29.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
28.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
28.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
28.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
28.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
28.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
28.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
27.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
26.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
26.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
25.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
24.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
24.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
24.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
24.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
24.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
23.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
23.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
22.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
22.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
22.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
21.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
21.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
21.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
21.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
21.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
21.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
21.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
20.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
20.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
20.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
20.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
20.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
20.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
20.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
20.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
20.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
19.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
19.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
19.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
19.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
18.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
18.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
18.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
18.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
17.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
17.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
16.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
16.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
16.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
16.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
16.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
16.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
16.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
16.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
15.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
15.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
15.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
15.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
14.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
14.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
14.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
13.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
13.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
12.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
12.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
12.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
12.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
12.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
12.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
12.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
11.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
11.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
11.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
10.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
10.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
10.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
10.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
10.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
10.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
10.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
10.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
9.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
9.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
9.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
9.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
9.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
8.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
8.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
7.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
7.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
7.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
6.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
6.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
6.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
6.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
6.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
5.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
5.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
5.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
5.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
5.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
4.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
3.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
