HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:40.5 nTPM
HPA Brain:89.9 nTPM
GTEx:40.5 nTPM
FANTOM5:42.5 Scaled Tags Per Million
Pig:47.3 nTPM
Mouse:53.4 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065743
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 89.9
Sample id Sample description nTPM
Hippocampus
nTPM: 60.5
1911 Female, age 85, right hemisphere 79.3
2529 Female, age 94, left hemisphere 74.0
2621 Female, age 67, right hemisphere 62.4
1898 Male, age 80, left hemisphere 51.3
1855 Male, age 76, left hemisphere 49.8
2148 Female, age 91, left hemisphere 46.2
Dentate gyrus
nTPM: 64.5
2530 Female, age 94, left hemisphere 122.1
2010 Male, age 76, both hemispheres 67.5
2528 Male, age 74, both hemispheres 67.3
2246 Female, age 85, both hemispheres 53.2
2531 Female, age 67, both hemispheres 43.0
1927 Female, age 91, both hemispheres 33.8
Entorhinal gyrus
nTPM: 69.1
2117 Female, age 91, right hemisphere 122.4
2764 Male, age 80, right hemisphere 95.2
1938 Female, age 85, left hemisphere 58.0
2686 Male, age 75, right hemisphere 50.0
2613 Female, age 94, left hemisphere 48.6
1787 Male, age 76, left hemisphere 40.1
Hippocampus, CA1
nTPM: 48.7
1873 Female, age 85, both hemispheres 61.6
2527 Male, age 74, both hemispheres 61.0
2082 Female, age 91, right hemisphere 52.1
2749 Male, age 80, left hemisphere 49.0
2045 Male, age 76, both hemispheres 19.9
Hippocampus, CA2
nTPM: 64.2
1963 Male, age 80, left hemisphere 93.5
2249 Male, age 74, both hemispheres 85.1
2437 Female, age 94, left hemisphere 65.5
2113 Female, age 91, right hemisphere 58.2
1940 Female, age 85, left hemisphere 53.2
1892 Male, age 76, both hemispheres 30.0
Hippocampus, CA3
nTPM: 39.7
1891 Female, age 85, both hemispheres 89.3
1867 Male, age 76, both hemispheres 45.0
2436 Male, age 74, both hemispheres 39.9
2137 Male, age 80, left hemisphere 23.6
2620 Female, age 94, left hemisphere 21.6
2861 Female, age 67, both hemispheres 18.9
Parahippocampal cortex
nTPM: 48.8
2692 Male, age 74, both hemispheres 78.3
2532 Female, age 72, left hemisphere 75.3
1990 Female, age 91, right hemisphere 68.7
2245 Female, age 91, both hemispheres 51.1
1850 Male, age 80, both hemispheres 48.6
2018 Male, age 76, both hemispheres 48.1
1933 Female, age 85, both hemispheres 42.9
2693 Female, age 94, both hemispheres 30.1
2250 Female, age 67, right hemisphere 26.6
2622 Female, age 67, right hemisphere 18.7
Perirhinal gyrus
nTPM: 28.5
2848 Male, age 76, right hemisphere 34.2
2521 Female, age 94, right hemisphere 32.7
1794 Male, age 80, right hemisphere 32.4
1847 Female, age 91, left hemisphere 24.6
1841 Female, age 85, right hemisphere 18.5
Subiculum
nTPM: 89.9
2042 Male, age 76, both hemispheres 127.2
1901 Male, age 80, both hemispheres 105.5
1977 Female, age 85, both hemispheres 92.5
2438 Female, age 94, left hemisphere 85.1
2619 Male, age 74, both hemispheres 71.1
2729 Female, age 91, right hemisphere 57.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 40.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.5
Samples: 197

Max nTPM: 186.1
Min nTPM: 0.7
Std nTPM: 32.9
Median nTPM: 31.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 186.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 160.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 152.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 137.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 137.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 128.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 121.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 120.1
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 112.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 104.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 104.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 42.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.5
FF:10153-102I9 76 years, female 49.7
FF:10169-103B7 60 years, female 35.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 47.3
Pig sample Sample description nTPM
Subiculum
nTPM: 15.8
Samples: 4

Max nTPM: 18.5
Min nTPM: 12.3
Sample A Female 16.3
Sample B Female 18.5
Sample C Male 12.3
Sample D Male 16.1
Dorsal hippocampus
nTPM: 47.3
Samples: 4

Max nTPM: 75.1
Min nTPM: 12.6
Sample A Female 75.1
Sample B Female 37.0
Sample C Male 64.6
Sample D Male 12.6
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 18.9
Min nTPM: 8.7
Sample A Female 9.5
Sample B Female 18.9
Sample C Male 8.7
Sample D Male 15.9
Ventral hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 44.1
Min nTPM: 12.2
Sample A Female 37.9
Sample B Female 12.2
Sample C Male 27.3
Sample D Male 44.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 53.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.7
Samples: 4

Max nTPM: 39.6
Min nTPM: 11.7
Sample A Male 39.6
Sample B Male 27.3
Sample C Female 24.2
Sample D Female 11.7
Hippocampal formation
nTPM: 53.4
Samples: 4

Max nTPM: 78.8
Min nTPM: 39.4
Sample A Male 39.4
Sample B Male 47.4
Sample C Female 78.8
Sample D Female 48.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
69447978 Antisense, RP_050419_02_D12, Mouse strain C57BL/6J (56 days, male) 5.1

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