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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
21.0
nTPM
HPA Brain:
89.5
nTPM
GTEx:
21.0
nTPM
FANTOM5:
39.0
Scaled Tags Per Million
Pig:
22.3
nTPM
Mouse:
18.9
nTPM
Allen mouse:
4.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
89.5
Sample id
Sample description
nTPM
Amygdala nTPM: 78.0
2814
Male, age 76, right hemisphere
113.8
2695
Female, age 67, right hemisphere
85.5
2514
Male, age 75, right hemisphere
67.7
2517
Female, age 94, left hemisphere
67.7
1987
Female, age 91, left hemisphere
55.5
Basal amygdala nTPM: 62.1
2827
Female, age 67, right hemisphere
91.3
2685
Female, age 94, left hemisphere
75.5
2110
Male, age 80, left hemisphere
61.4
1955
Male, age 76, both hemispheres
59.7
2609
Male, age 75, right hemisphere
52.2
2243
Female, age 91, right hemisphere
32.4
Central amygdala nTPM: 73.9
1905
Male, age 76, both hemispheres
92.2
2826
Female, age 94, left hemisphere
83.5
2701
Female, age 91, right hemisphere
73.9
2239
Male, age 80, left hemisphere
66.7
2515
Male, age 75, right hemisphere
53.1
Corticomedial amygdala nTPM: 40.7
2535
Female, age 67, right hemisphere
54.0
2429
Female, age 94, left hemisphere
50.0
2428
Male, age 75, right hemisphere
48.9
2240
Male, age 76, both hemispheres
39.8
2829
Male, age 80, left hemisphere
33.1
2242
Female, age 91, right hemisphere
18.6
Lateral amygdala nTPM: 89.5
2830
Female, age 67, right hemisphere
119.8
2256
Male, age 80, left hemisphere
90.9
2516
Male, age 75, right hemisphere
86.4
1883
Male, age 76, both hemispheres
81.6
2255
Female, age 91, right hemisphere
80.4
2534
Female, age 94, left hemisphere
77.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
21.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 21.0
Samples: 152
Max nTPM: 90.6
Min nTPM: 0.0
Std nTPM: 15.1
Median nTPM: 16.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
90.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
69.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
60.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
59.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
53.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
53.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
49.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
48.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
48.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
47.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
47.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
45.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
44.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
44.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
42.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
42.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
42.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
42.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
41.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
40.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
38.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
37.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
37.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
37.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
37.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
35.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
35.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
34.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
32.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
32.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
32.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
31.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
30.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
29.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
29.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
29.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
28.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
28.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
27.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
27.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
27.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
26.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
26.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
26.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
26.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
26.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
26.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
26.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
25.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
24.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
24.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
24.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
24.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
23.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
22.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
22.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
21.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
21.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
21.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
20.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
20.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
20.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
20.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
19.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
19.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
19.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
19.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
18.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
18.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
18.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
18.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
18.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
18.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
18.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
17.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
17.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
16.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
15.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
15.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
15.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
15.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
15.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
15.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
15.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
15.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
15.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
15.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
15.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
15.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
14.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
14.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
14.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
14.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
14.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
13.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
13.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
13.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
13.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
13.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
12.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
12.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
12.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
12.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
12.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
11.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
11.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
11.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
11.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
11.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
10.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
9.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
9.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
9.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
9.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
9.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
9.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
9.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
8.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
8.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
8.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
7.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
7.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
7.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
7.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
7.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
7.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
7.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
7.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
7.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
6.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
6.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
6.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
6.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
6.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
6.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
5.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
5.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
5.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
5.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
5.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
5.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
4.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
4.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
4.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
3.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
3.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
2.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
2.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
1.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
0.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
0.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
18.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 18.9
Samples: 4
Max nTPM: 29.4
Min nTPM: 14.4
Sample A
Male
16.4
Sample B
Male
14.4
Sample C
Female
29.4
Sample D
Female
15.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
