HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:27.3 nTPM
HPA Brain:36.2 nTPM
GTEx:27.3 nTPM
FANTOM5:31.3 Scaled Tags Per Million
Mouse:49.3 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056185
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 36.2
Sample id Sample description nTPM
Hippocampus
nTPM: 35.8
1898 Male, age 80, left hemisphere 39.7
1855 Male, age 76, left hemisphere 37.8
2529 Female, age 94, left hemisphere 36.8
1911 Female, age 85, right hemisphere 35.0
2148 Female, age 91, left hemisphere 33.7
2621 Female, age 67, right hemisphere 31.9
Dentate gyrus
nTPM: 33.3
2010 Male, age 76, both hemispheres 38.8
2530 Female, age 94, left hemisphere 35.2
2528 Male, age 74, both hemispheres 35.1
1927 Female, age 91, both hemispheres 31.7
2246 Female, age 85, both hemispheres 31.6
2531 Female, age 67, both hemispheres 27.5
Entorhinal gyrus
nTPM: 31.4
2117 Female, age 91, right hemisphere 37.4
1787 Male, age 76, left hemisphere 35.8
1938 Female, age 85, left hemisphere 32.3
2764 Male, age 80, right hemisphere 30.8
2686 Male, age 75, right hemisphere 28.1
2613 Female, age 94, left hemisphere 23.9
Hippocampus, CA1
nTPM: 32.5
1873 Female, age 85, both hemispheres 34.2
2527 Male, age 74, both hemispheres 33.6
2082 Female, age 91, right hemisphere 33.2
2749 Male, age 80, left hemisphere 30.9
2045 Male, age 76, both hemispheres 30.6
Hippocampus, CA2
nTPM: 36.2
2249 Male, age 74, both hemispheres 43.9
1963 Male, age 80, left hemisphere 42.7
1892 Male, age 76, both hemispheres 37.4
1940 Female, age 85, left hemisphere 34.1
2113 Female, age 91, right hemisphere 32.3
2437 Female, age 94, left hemisphere 27.0
Hippocampus, CA3
nTPM: 32.5
2436 Male, age 74, both hemispheres 43.6
1867 Male, age 76, both hemispheres 35.7
2137 Male, age 80, left hemisphere 34.8
1891 Female, age 85, both hemispheres 34.2
2620 Female, age 94, left hemisphere 26.8
2861 Female, age 67, both hemispheres 19.7
Parahippocampal cortex
nTPM: 32.2
2018 Male, age 76, both hemispheres 41.4
1990 Female, age 91, right hemisphere 36.9
1850 Male, age 80, both hemispheres 35.5
1933 Female, age 85, both hemispheres 34.7
2250 Female, age 67, right hemisphere 34.6
2245 Female, age 91, both hemispheres 33.7
2532 Female, age 72, left hemisphere 28.3
2693 Female, age 94, both hemispheres 27.4
2692 Male, age 74, both hemispheres 26.6
2622 Female, age 67, right hemisphere 23.4
Perirhinal gyrus
nTPM: 32.4
1794 Male, age 80, right hemisphere 38.8
1847 Female, age 91, left hemisphere 36.7
1841 Female, age 85, right hemisphere 31.9
2521 Female, age 94, right hemisphere 29.1
2848 Male, age 76, right hemisphere 25.5
Subiculum
nTPM: 33.8
1977 Female, age 85, both hemispheres 36.0
1901 Male, age 80, both hemispheres 35.9
2042 Male, age 76, both hemispheres 35.7
2619 Male, age 74, both hemispheres 34.7
2729 Female, age 91, right hemisphere 32.9
2438 Female, age 94, left hemisphere 27.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 27.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.3
Samples: 197

Max nTPM: 64.1
Min nTPM: 12.9
Std nTPM: 7.4
Median nTPM: 26.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 64.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 53.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 45.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 44.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 43.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 42.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 41.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 41.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 41.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 40.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 39.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 31.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.3
FF:10153-102I9 76 years, female 31.5
FF:10169-103B7 60 years, female 31.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 49.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.4
Samples: 4

Max nTPM: 50.0
Min nTPM: 34.8
Sample A Male 50.0
Sample B Male 49.2
Sample C Female 39.4
Sample D Female 34.8
Hippocampal formation
nTPM: 49.4
Samples: 4

Max nTPM: 60.4
Min nTPM: 42.6
Sample A Male 47.6
Sample B Male 46.8
Sample C Female 42.6
Sample D Female 60.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
68499177 Antisense, RP_050118_01_A12, Mouse strain C57BL/6J (56 days, male) 1.4

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