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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RACK1 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1896.0
Number of samples
349
Samples
Sample
Description
TPM
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
5779.2
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
5447.4
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
5114.4
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
5074.3
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
4770.1
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
4677.9
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
4607.6
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
4532.0
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
4524.1
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
4320.4
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
4167.8
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
4069.9
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
4030.0
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
4020.6
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
3944.0
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
3894.1
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
3849.5
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
3572.1
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
3558.5
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
3482.8
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
3478.0
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
3423.6
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
3409.0
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
3390.4
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
3387.4
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
3357.3
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
3354.9
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
3348.9
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
3336.5
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
3242.7
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
3227.7
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
3227.5
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
3191.5
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
3189.4
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
3183.2
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
3152.8
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
3110.8
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
3106.4
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
3072.2
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
3048.8
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
3018.1
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
2972.0
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
2951.5
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
2949.7
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
2914.9
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
2897.5
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
2812.9
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
2808.3
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
2774.2
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
2766.3
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
2762.2
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
2722.3
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
2719.7
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
2664.8
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
2628.4
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
2620.4
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
2612.9
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
2610.7
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
2598.3
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
2590.9
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2587.7
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
2581.0
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
2575.8
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
2573.5
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
2571.7
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
2567.8
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
2562.1
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
2561.0
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
2514.5
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
2499.9
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
2493.2
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
2492.8
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
2469.1
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
2456.1
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
2428.2
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
2410.2
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
2396.6
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
2395.6
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
2389.1
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
2377.7
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
2376.5
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
2335.7
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
2313.8
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
2312.7
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
2288.6
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
2284.6
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
2284.2
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
2281.6
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
2270.9
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
2266.4
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
2264.9
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
2262.7
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
2260.2
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
2246.6
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
2237.3
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
2207.1
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
2204.0
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
2202.9
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
2202.9
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
2197.9
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
2192.3
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
2189.8
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
2170.5
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
2169.4
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
2167.4
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
2166.3
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
2161.7
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
2135.1
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
2133.0
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
2128.3
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
2123.6
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
2121.9
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
2116.2
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
2109.3
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
2085.1
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
2074.4
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
2051.3
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
2048.1
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
2045.8
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
2035.1
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
2033.9
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
2028.4
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
1997.6
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
1982.0
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
1980.8
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1974.8
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1965.2
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
1965.0
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
1956.9
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
1953.4
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1953.0
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
1952.0
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
1942.3
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1939.2
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
1932.2
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1924.6
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
1922.5
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
1920.8
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
1904.8
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
1893.9
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
1881.5
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
1856.6
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1853.4
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
1852.4
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
1840.8
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
1838.1
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1836.2
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1831.6
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1825.3
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
1814.1
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
1811.8
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
1799.2
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1798.8
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1797.9
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1781.5
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1780.2
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
1777.5
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
1774.3
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
1766.5
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
1760.7
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1755.1
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
1754.4
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1753.6
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1747.3
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
1744.5
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
1740.0
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1737.8
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1726.5
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1722.9
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
1712.3
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1710.4
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
1709.7
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1699.0
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
1696.6
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1694.1
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
1691.1
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
1690.1
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
1689.6
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
1686.7
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
1684.3
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
1682.3
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
1671.5
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1668.8
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
1668.5
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
1667.7
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
1662.4
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
1661.9
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
1660.9
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
1658.1
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1653.5
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
1650.6
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
1629.9
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1620.6
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1602.8
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
1599.7
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
1599.4
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1579.8
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1574.7
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1573.6
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1572.7
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
1568.1
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
1567.5
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
1561.7
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
1554.4
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
1552.0
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1551.4
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1547.4
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
1543.6
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
1537.7
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1517.5
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
1516.6
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1515.2
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1510.7
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
1508.0
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1498.8
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
1493.8
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
1488.2
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
1484.1
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
1482.7
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
1477.8
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1475.1
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1475.1
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
1474.2
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
1464.7
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1464.6
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1456.4
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
1455.0
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1452.6
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
1451.9
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
1450.7
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1450.6
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
1439.6
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
1439.4
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
1438.9
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
1435.2
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
1426.3
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1398.5
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
1390.6
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
1389.7
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1386.3
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1371.3
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
1364.9
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
1358.9
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
1355.8
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
1350.4
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1345.0
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
1338.8
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
1337.3
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
1336.0
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1335.0
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
1334.5
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1330.1
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
1321.3
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
1318.5
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1312.0
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
1307.9
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
1306.8
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1306.6
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
1304.7
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1300.4
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1296.1
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
1293.8
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1284.5
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1280.6
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
1269.7
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1263.2
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
1258.3
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
1256.0
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
1252.7
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
1250.5
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1250.4
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1250.1
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
1234.4
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1231.4
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
1230.0
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
1229.6
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1211.2
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
1210.6
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
1204.7
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1192.4
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1186.3
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1183.8
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
1171.3
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
1144.6
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
1142.2
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1141.3
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1134.6
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
1132.8
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
1130.9
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
1130.2
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
1126.9
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
1119.8
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
1119.5
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
1106.5
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
1101.6
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1077.1
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
1061.6
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
1060.7
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
1037.2
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
1026.5
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
1023.4
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
1017.5
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
1010.7
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
1008.7
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1002.0
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
999.4
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
979.1
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
979.0
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
960.8
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
957.2
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
957.1
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
954.7
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
942.1
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
937.0
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
931.5
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
922.2
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
911.8
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
909.9
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
909.3
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
887.6
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
879.6
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
855.1
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
846.8
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
842.9
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
836.3
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
829.1
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
807.5
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
794.5
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
791.7
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
786.8
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
781.4
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
773.9
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
770.8
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
766.9
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
752.9
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
751.2
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
749.5
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
749.4
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
735.4
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
721.2
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
693.7
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
680.8
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
646.7
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
604.1
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
597.8
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
580.4
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
548.9
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
530.5
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RACK1 is potential prognostic, high expression is unfavorable in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1633.5
Number of samples
81
Samples
Sample
Description
TPM
DO46331
0 years, female, NA, stage:III, dead, 612 days
4491.2
DO46370
0 years, female, NA, stage:III, dead, 1727 days
4146.2
DO46384
0 years, female, NA, stage:III, dead, 614 days
3793.2
DO46366
0 years, female, NA, stage:III, dead, 2054 days
3736.3
DO46356
0 years, female, NA, stage:III, dead, 911 days
3352.1
DO46342
0 years, female, NA, stage:III, dead, 1398 days
3266.7
DO46333
0 years, female, NA, stage:III, dead, 359 days
2825.7
DO46390
0 years, female, NA, stage:III, dead, 374 days
2718.8
DO46561
0 years, female, NA, stage:III, dead, 195 days
2508.6
DO46591
0 years, female, NA, stage:III, dead, 195 days
2450.2
DO46402
0 years, female, NA, stage:III, dead, 511 days
2446.7
DO46338
0 years, female, NA, stage:III, dead, 596 days
2441.5
DO46412
0 years, female, NA, stage:III, dead, 597 days
2398.6
DO46611
0 years, female, NA, stage:III, dead, 734 days
2385.8
DO46392
0 years, female, NA, stage:III, dead, 628 days
2378.9
DO46568
0 years, female, NA, stage:III, dead, 320 days
2315.9
DO46581
0 years, female, NA, stage:III, dead, 408 days
2264.8
DO46597
0 years, female, NA, stage:III, dead, 393 days
2172.3
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
2108.6
DO46378
0 years, female, NA, stage:III, alive, 843 days
2043.4
DO46493
0 years, female, NA, stage:IV, alive, 839 days
2019.8
DO46453
0 years, female, NA, stage:III, dead, 3294 days
1984.8
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
1980.2
DO46404
0 years, female, NA, stage:III, dead, 690 days
1958.1
DO46560
0 years, female, NA, stage:IV, dead, 286 days
1885.3
DO46326
0 years, female, NA, stage:III, dead, 701 days
1877.7
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1875.1
DO46398
0 years, female, NA, stage:III, alive, 437 days
1759.2
DO46576
0 years, female, NA, stage:III, alive, 133 days
1741.7
DO46508
0 years, female, NA, stage:III, dead, 2101 days
1730.9
DO46408
0 years, female, NA, stage:III, dead, 489 days
1713.6
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
1645.6
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
1633.8
DO46352
0 years, female, NA, stage:III, dead, 677 days
1622.2
DO46372
0 years, female, NA, stage:III, dead, 1326 days
1513.9
DO46538
0 years, female, NA, stage:III, dead, 1527 days
1484.1
DO46364
0 years, female, NA, stage:III, dead, 806 days
1459.8
DO46332
0 years, female, NA, stage:III, dead, 689 days
1419.0
DO46448
0 years, female, NA, stage:III, dead, 654 days
1408.0
DO46551
0 years, female, NA, stage:III, dead, 1055 days
1400.9
DO46602
0 years, female, NA, stage:III, dead, 205 days
1387.6
DO46463
0 years, female, NA, stage:III, dead, 2451 days
1376.4
DO46388
0 years, female, NA, stage:III, dead, 413 days
1374.4
DO46325
0 years, female, NA, stage:III, dead, 477 days
1352.9
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1332.3
DO46386
0 years, female, NA, stage:III, dead, 1162 days
1315.6
DO46546
0 years, female, NA, stage:III, dead, 1889 days
1292.2
DO46358
0 years, female, NA, stage:III, dead, 423 days
1278.6
DO46334
0 years, female, NA, stage:III, dead, 496 days
1257.6
DO46586
0 years, female, NA, stage:III, dead, 1019 days
1241.6
DO46344
0 years, female, NA, stage:III, dead, 642 days
1220.6
DO46400
0 years, female, NA, stage:III, dead, 719 days
1220.6
DO46518
0 years, female, NA, stage:III, alive, 2960 days
1211.0
DO46374
0 years, female, NA, stage:III, dead, 1409 days
1180.3
DO46330
0 years, female, NA, stage:III, dead, 684 days
1173.3
DO46436
0 years, female, NA, stage:III, alive, 3193 days
1170.7
DO46368
0 years, female, NA, stage:III, dead, 2879 days
1170.2
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1104.0
DO46329
0 years, female, NA, stage:III, dead, 1699 days
1095.8
DO46346
0 years, female, NA, stage:III, dead, 1187 days
1071.6
DO46350
0 years, female, NA, stage:III, dead, 886 days
1046.2
DO46566
0 years, female, NA, stage:III, dead, 673 days
1030.6
DO46606
0 years, female, NA, stage:III, alive, 804 days
990.7
DO46443
0 years, female, NA, stage:III, dead, 2464 days
954.7
DO46328
0 years, female, NA, stage:III, dead, 972 days
900.8
DO46588
0 years, female, NA, stage:III, dead, 438 days
892.4
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
889.9
DO46528
0 years, female, NA, stage:III, alive, 6139 days
863.3
DO46340
0 years, female, NA, stage:III, dead, 616 days
850.1
DO46348
0 years, female, NA, stage:IV, dead, 287 days
846.1
DO46396
0 years, female, NA, stage:III, dead, 583 days
842.7
DO46468
0 years, female, NA, stage:III, alive, 2776 days
841.0
DO46571
0 years, female, NA, stage:III, dead, 243 days
838.4
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
751.4
DO46354
0 years, female, NA, stage:III, dead, 843 days
704.0
DO46432
0 years, female, NA, stage:III, alive, 2218 days
693.6
DO46327
0 years, female, NA, stage:III, dead, 184 days
673.6
DO46362
0 years, female, NA, stage:III, dead, 1639 days
659.4
DO46382
0 years, female, NA, stage:IV, dead, 311 days
633.3
DO46336
0 years, female, NA, stage:IV, dead, 664 days
623.4
DO46533
0 years, female, NA, stage:III, alive, 3667 days
602.2
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.7
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.6
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.6
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.5
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
0.5
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.5
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.5
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.4
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.4
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.4
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
0.4
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.4
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.4
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
0.4
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.4
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.4
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.3
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.3
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
0.3
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
0.3
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.3
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.3
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
0.3
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.3
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.3
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.3
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.3
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.3
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.3
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.3
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.3
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.3
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.3
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.2
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.2
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
0.2
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.2
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.2
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
0.2
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.2
21efd60f-6a31-4b98-9477-16a905_D2
Normal
0.2
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
0.2
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.2
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
0.2
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.2
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.2
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.2
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.2
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.1
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.1
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.1
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.1
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.1
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.1
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.1
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.1
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.1
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
0.1
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.1
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.1
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.1
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.0
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.0
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.0
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.0
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.0
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
0.0
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.0
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.0
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.0
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
0.0
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.1
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.1
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.1
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.1
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-0.1
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-0.1
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.1
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.1
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.1
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-0.1
285fed94-1495-448e-879b-b55de9_D2
Tumor
-0.1
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.1
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.2
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.2
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.2
e9d416e7-f661-400a-896e-388545_D2
Tumor
-0.2
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.2
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-0.2
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.2
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-0.2
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-0.2
15524912-685a-47ce-a824-567848_D2
Tumor
-0.2
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-0.3
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.3
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-0.3
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-0.3
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.3
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.5
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-0.5
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.5
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.5
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-0.5
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.5
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-0.6
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-0.6
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-0.7
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.