Expression of HLA-E in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

HLA-E is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 94.08

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

146.9

Number of samples

492

Samples

Sample	Description	TPM
TCGA-F7-8489-01A	48 years, male, white, stage:Stage II, alive, 658 days	1114.6
TCGA-CV-7410-01A	61 years, male, white, stage:Stage III, dead, 6417 days	1010.5
TCGA-CN-4736-01A	70 years, female, white, stage:'--, dead, 395 days	908.3
TCGA-CQ-5334-01A	87 years, male, white, stage:Stage IVA, dead, 129 days	882.7
TCGA-BA-5556-01A	58 years, female, white, stage:Stage II, alive, 725 days	756.9
TCGA-CQ-5329-01A	46 years, female, white, stage:Stage II, alive, 2143 days	750.1
TCGA-CV-A6JD-01A	82 years, female, white, stage:'--, dead, 182 days	718.9
TCGA-DQ-5625-01A	52 years, female, white, stage:'--, dead, 1133 days	704.9
TCGA-CV-6943-01A	74 years, male, white, stage:Stage III, dead, 602 days	697.7
TCGA-CV-A6JZ-01A	68 years, male, white, stage:Stage II, alive, 714 days	668.7
TCGA-BA-6873-01A	28 years, male, white, stage:Stage IVA, alive, 122 days	651.9
TCGA-RS-A6TO-01A	82 years, female, white, stage:Stage IVA, dead, 387 days	645.4
TCGA-CV-A461-01A	65 years, male, white, stage:'--, dead, 2064 days	625.9
TCGA-QK-A652-01A	60 years, male, white, stage:Stage III, alive, 645 days	586.9
TCGA-CV-A6JE-01A	78 years, male, white, stage:'--, alive, 1075 days	582.9
TCGA-CN-5361-01A	80 years, male, white, stage:Stage IVA, dead, 2120 days	575.0
TCGA-HD-8635-01A	61 years, female, white, stage:Stage III, alive, 695 days	560.0
TCGA-D6-6824-01A	61 years, male, white, stage:Stage IVA, alive, 77 days	552.8
TCGA-F7-A620-01A	47 years, male, white, stage:Stage III, alive, 543 days	545.6
TCGA-CN-5360-01A	68 years, male, white, stage:Stage IVA, alive, 2169 days	543.7
TCGA-CR-6480-01A	53 years, male, white, stage:'--, alive, 362 days	543.7
TCGA-CN-5363-01A	48 years, male, black or african american, stage:Stage IVB, dead, 253 days	535.4
TCGA-D6-8568-01A	62 years, male, white, stage:Stage II, alive, 759 days	520.2
TCGA-HD-7229-01A	60 years, male, white, stage:Stage IVA, alive, 1027 days	514.8
TCGA-T3-A92M-01A	52 years, male, black or african american, stage:Stage IVA, alive, 417 days	498.9
TCGA-CV-5440-01A	52 years, male, white, stage:Stage IVA, alive, 3270 days	485.2
TCGA-CQ-7063-01A	59 years, female, white, stage:Stage I, alive, 2133 days	478.6
TCGA-F7-A61S-01A	62 years, male, white, stage:Stage III, alive, 576 days	473.2
TCGA-CR-7392-01A	67 years, female, white, stage:Stage IVA, alive, 1425 days	469.8
TCGA-CN-4733-01A	61 years, male, white, stage:Stage III, alive, 1586 days	465.2
TCGA-H7-8501-01A	54 years, male, white, stage:Stage IVA, alive, 461 days	457.6
TCGA-CN-6020-01A	58 years, male, black or african american, stage:Stage III, dead, 205 days	456.5
TCGA-CV-5444-01A	64 years, male, black or african american, stage:Stage IVA, alive, 2437 days	455.0
TCGA-BA-5558-01A	65 years, male, white, stage:'--, alive, 1995 days	447.9
TCGA-CV-7104-01A	61 years, female, white, stage:Stage IVA, dead, 393 days	445.6
TCGA-CV-A45T-01A	64 years, female, white, stage:'--, dead, 4856 days	430.8
TCGA-CV-6961-01A	61 years, male, white, stage:Stage II, dead, 76 days	430.0
TCGA-RS-A6TP-01A	58 years, male, white, stage:Stage II, alive, 516 days	426.0
TCGA-CN-A6V6-01A	59 years, male, white, stage:Stage IVA, alive, 635 days	423.7
TCGA-CV-7099-01A	85 years, female, white, stage:Stage II, dead, 243 days	420.8
TCGA-CV-6934-01A	66 years, female, white, stage:Stage IVA, dead, 65 days	420.4
TCGA-CR-6487-01A	50 years, male, white, stage:Stage I, alive, 234 days	419.3
TCGA-CQ-A4C7-01A	88 years, male, white, stage:Stage III, dead, 353 days	413.9
TCGA-CR-7380-01A	58 years, male, white, stage:Stage IVB, dead, 606 days	406.9
TCGA-D6-A6EM-01A	65 years, female, white, stage:Stage III, alive, 232 days	402.1
TCGA-H7-A76A-01A	57 years, male, white, stage:'--, alive, 637 days	397.7
TCGA-CV-6954-01A	59 years, male, black or african american, stage:Stage IVA, dead, 2002 days	385.6
TCGA-CV-6950-01A	64 years, male, white, stage:Stage IVA, dead, 459 days	380.3
TCGA-UF-A718-01A	62 years, male, white, stage:Stage IVA, alive, 1971 days	379.0
TCGA-CN-6996-01A	58 years, female, white, stage:Stage IVA, dead, 530 days	377.4
TCGA-CV-7422-01A	60 years, female, white, stage:Stage IVA, dead, 1037 days	372.2
TCGA-P3-A6T4-01A	54 years, male, white, stage:Stage IVA, dead, 62 days	370.1
TCGA-P3-A6SW-01A	50 years, male, white, stage:Stage IVB, alive, 1120 days	367.8
TCGA-CV-5966-01A	63 years, female, white, stage:Stage IVA, dead, 545 days	367.2
TCGA-CV-5435-01A	57 years, male, white, stage:Stage IVA, dead, 2319 days	364.0
TCGA-D6-6825-01A	73 years, male, white, stage:Stage I, alive, 491 days	361.3
TCGA-UF-A7JS-01A	59 years, male, white, stage:Stage IVA, dead, 680 days	357.6
TCGA-IQ-A6SH-01A	55 years, male, black or african american, stage:Stage III, alive, 471 days	357.4
TCGA-P3-A6T3-01A	49 years, male, white, stage:Stage IVA, dead, 577 days	352.1
TCGA-F7-A624-01A	73 years, male, white, stage:Stage II, alive, 378 days	352.1
TCGA-CV-6945-01A	41 years, male, white, stage:Stage IVA, dead, 366 days	348.9
TCGA-CV-A6JM-01A	85 years, male, white, stage:'--, dead, 194 days	343.6
TCGA-CV-5439-01A	62 years, male, white, stage:Stage IVA, dead, 546 days	343.0
TCGA-CN-A49B-01A	71 years, male, white, stage:Stage III, alive, 904 days	340.0
TCGA-CR-6488-01A	68 years, female, white, stage:Stage II, alive, 379 days	339.7
TCGA-CN-6995-01A	78 years, male, white, stage:Stage IVA, dead, 112 days	339.4
TCGA-CN-A6V3-01A	61 years, male, white, stage:Stage IVA, alive, 742 days	339.3
TCGA-P3-A5QE-01A	49 years, male, white, stage:Stage III, alive, 1559 days	335.7
TCGA-CV-5977-01A	66 years, male, white, stage:Stage IVA, alive, 1840 days	332.3
TCGA-CV-A6K1-01A	65 years, male, white, stage:Stage IVA, alive, 685 days	331.3
TCGA-HD-7753-01A	62 years, male, black or african american, stage:Stage I, alive, 866 days	328.0
TCGA-CQ-A4CE-01A	76 years, female, stage:Stage II, alive, 897 days	326.9
TCGA-CQ-6224-01A	52 years, male, white, stage:Stage IVA, alive, 1721 days	322.2
TCGA-T2-A6WX-01A	73 years, female, white, stage:'--, dead, 209 days	316.5
TCGA-CQ-5326-01A	67 years, male, white, stage:Stage IVA, dead, 89 days	316.4
TCGA-P3-A6T5-01A	79 years, female, white, stage:Stage IVA, dead, 882 days	315.2
TCGA-BA-A6DI-01A	62 years, male, black or african american, stage:'--, dead, 336 days	314.1
TCGA-CR-6474-01A	51 years, male, white, stage:Stage IVA, dead, 564 days	313.7
TCGA-QK-A6II-01A	52 years, male, white, stage:Stage IVA, dead, 284 days	308.2
TCGA-CV-7261-01A	57 years, male, white, stage:Stage IVA, alive, 1512 days	308.0
TCGA-CR-7383-01A	79 years, female, white, stage:Stage I, dead, 521 days	307.4
TCGA-CV-7425-01A	77 years, female, white, stage:Stage III, dead, 1718 days	305.0
TCGA-BA-6870-01A	60 years, female, black or african american, stage:'--, dead, 451 days	304.6
TCGA-CQ-A4C6-01A	63 years, male, asian, stage:Stage II, alive, 1353 days	304.4
TCGA-CV-A464-01A	48 years, male, white, stage:Stage III, alive, 1722 days	303.2
TCGA-CV-A45Y-01A	61 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	302.9
TCGA-CQ-7071-01A	76 years, female, white, stage:Stage III, alive, 1311 days	301.0
TCGA-BA-A4II-01A	46 years, male, white, stage:Stage II, alive, 918 days	298.2
TCGA-CV-6938-01A	87 years, male, white, stage:Stage II, dead, 144 days	296.9
TCGA-CV-7424-01A	67 years, male, asian, stage:Stage IVA, dead, 453 days	294.1
TCGA-CN-6023-01A	73 years, male, white, stage:Stage IVA, alive, 1584 days	292.3
TCGA-CV-6959-01A	48 years, male, white, stage:Stage III, dead, 256 days	288.6
TCGA-CR-7372-01A	45 years, male, white, stage:Stage I, alive, 759 days	286.4
TCGA-CR-6481-01A	47 years, male, white, stage:'--, alive, 311 days	286.0
TCGA-CN-6017-01A	55 years, male, white, stage:Stage IVA, dead, 853 days	283.7
TCGA-CQ-5333-01A	74 years, male, white, stage:Stage II, dead, 341 days	281.4
TCGA-CQ-5325-01A	65 years, male, white, stage:Stage I, dead, 654 days	275.6
TCGA-CR-7374-01A	67 years, female, white, stage:'--, alive, 30 days	275.3
TCGA-HL-7533-01A	65 years, male, white, stage:'--, alive, 1057 days	274.6
TCGA-IQ-A6SG-01A	61 years, female, white, stage:Stage III, alive, 579 days	274.5
TCGA-CR-7385-01A	42 years, male, white, stage:'--, alive, 997 days	274.2
TCGA-KU-A6H7-01A	55 years, female, white, stage:Stage IVA, alive, 586 days	267.9
TCGA-CV-6937-01A	71 years, male, white, stage:Stage II, dead, 624 days	265.5
TCGA-BA-A4IF-01A	59 years, male, white, stage:'--, alive, 895 days	262.8
TCGA-D6-A6EQ-01A	57 years, male, white, stage:Stage IVA, alive, 368 days	261.4
TCGA-CV-5434-01A	60 years, male, black or african american, stage:Stage IVA, dead, 3314 days	259.8
TCGA-CV-A6K2-01A	79 years, male, white, stage:Stage IVA, dead, 317 days	259.7
TCGA-CN-4737-01A	19 years, male, white, stage:Stage IVA, alive, 625 days	258.9
TCGA-CN-6998-01A	53 years, male, white, stage:Stage IVA, dead, 357 days	253.6
TCGA-CR-7404-01A	53 years, male, white, stage:'--, alive, 1472 days	253.2
TCGA-CX-7085-01A	77 years, female, white, stage:Stage I, alive, 321 days	252.5
TCGA-CV-5430-01A	61 years, male, white, stage:Stage IVA, alive, 4241 days	250.6
TCGA-MT-A67F-01A	60 years, female, white, stage:Stage IVA, alive, 384 days	250.5
TCGA-CX-7219-01A	47 years, male, black or african american, stage:Stage IVA, alive, 1045 days	248.4
TCGA-CV-A45W-01A	75 years, male, white, stage:Stage II, dead, 1398 days	245.8
TCGA-CV-7242-01A	60 years, female, white, stage:Stage II, alive, 1095 days	243.4
TCGA-BB-A5HY-01A	64 years, male, white, stage:Stage IVA, dead, 321 days	241.3
TCGA-CR-7393-01A	26 years, male, white, stage:Stage III, alive, 993 days	241.0
TCGA-BB-A6UO-01A	61 years, female, white, stage:Stage IVA, dead, 268 days	241.0
TCGA-D6-8569-01A	52 years, male, white, stage:Stage II, alive, 770 days	237.0
TCGA-T2-A6X2-01A	82 years, male, white, stage:Stage III, alive, 987 days	236.9
TCGA-CV-A465-01A	24 years, male, white, stage:Stage III, dead, 215 days	235.8
TCGA-UF-A719-01A	54 years, male, stage:Stage II, alive, 1663 days	234.7
TCGA-H7-A6C4-01A	35 years, female, white, stage:Stage IVA, dead, 414 days	234.6
TCGA-CV-7180-01A	34 years, male, white, stage:Stage II, dead, 327 days	233.3
TCGA-CV-7429-01A	55 years, male, white, stage:Stage IVA, dead, 107 days	230.8
TCGA-CQ-A4CH-01A	58 years, male, asian, stage:Stage II, dead, 379 days	229.9
TCGA-CR-7388-01A	70 years, female, white, stage:'--, dead, 823 days	224.6
TCGA-CN-A63T-01A	60 years, male, white, stage:Stage IVA, alive, 225 days	224.4
TCGA-CN-A49A-01A	60 years, male, white, stage:Stage IVB, dead, 526 days	223.2
TCGA-CQ-7065-01A	40 years, male, asian, stage:Stage II, alive, 1628 days	222.8
TCGA-CR-7399-01A	60 years, female, white, stage:Stage IVA, alive, 181 days	220.4
TCGA-CQ-5331-01A	73 years, female, white, stage:'--, alive, 1399 days	220.2
TCGA-CN-A6UY-01A	57 years, male, white, stage:Stage IVA, alive, 713 days	215.3
TCGA-QK-AA3K-01A	60 years, male, black or african american, stage:Stage IVA, alive, 253 days	214.5
TCGA-P3-A6T7-01A	55 years, male, white, stage:Stage IVA, dead, 487 days	211.6
TCGA-BB-4224-01A	52 years, male, white, stage:Stage IVA, alive, 278 days	209.9
TCGA-CV-5979-01A	26 years, male, white, stage:Stage IVA, alive, 1315 days	209.4
TCGA-CV-7089-01A	74 years, male, white, stage:Stage IVA, dead, 1972 days	209.2
TCGA-BA-5559-01A	71 years, male, white, stage:'--, dead, 2083 days	206.8
TCGA-CV-5971-01A	60 years, male, white, stage:Stage IVA, alive, 701 days	204.7
TCGA-P3-A5Q5-01A	54 years, male, white, stage:Stage IVA, alive, 910 days	201.2
TCGA-CR-5247-01A	48 years, male, black or african american, stage:'--, alive, 358 days	200.6
TCGA-CV-A463-01A	82 years, female, white, stage:Stage IVA, dead, 23 days	200.5
TCGA-T3-A92N-01A	79 years, male, black or african american, stage:Stage IVA, dead, 95 days	200.4
TCGA-MT-A51W-01A	52 years, female, white, stage:Stage I, alive, 437 days	196.0
TCGA-CN-5358-01A	60 years, male, white, stage:Stage II, dead, 261 days	195.8
TCGA-CR-5248-01A	53 years, male, white, stage:'--, alive, 1663 days	194.3
TCGA-CN-6022-01A	49 years, male, white, stage:Stage IVA, dead, 281 days	191.3
TCGA-BB-4228-01A	50 years, male, white, stage:Stage III, alive, 559 days	191.0
TCGA-CN-4731-01A	63 years, female, white, stage:Stage IVA, dead, 998 days	190.7
TCGA-H7-7774-01A	75 years, female, white, stage:Stage IVA, alive, 407 days	190.4
TCGA-F7-A50J-01A	67 years, female, white, stage:Stage III, alive, 947 days	189.4
TCGA-CN-6997-01A	66 years, male, white, stage:Stage IVA, dead, 988 days	189.0
TCGA-CR-7370-01A	72 years, female, white, stage:'--, alive, 105 days	185.2
TCGA-UF-A7JV-01A	62 years, female, white, stage:Stage IVA, dead, 90 days	184.5
TCGA-CV-6933-01A	53 years, male, white, stage:Stage III, dead, 2741 days	182.4
TCGA-BA-A6DG-01A	49 years, male, white, stage:'--, dead, 69 days	182.3
TCGA-CQ-6227-01A	77 years, male, white, stage:Stage IVA, dead, 129 days	181.2
TCGA-CR-7389-01A	55 years, male, black or african american, stage:'--, alive, 392 days	180.0
TCGA-CN-A63U-01A	50 years, male, white, stage:Stage IVA, alive, 964 days	179.1
TCGA-CQ-5330-01A	69 years, female, white, stage:Stage IVA, alive, 1897 days	177.3
TCGA-P3-A6T2-01A	45 years, male, white, stage:Stage IVA, alive, 2298 days	175.6
TCGA-BA-4078-01A	83 years, male, white, stage:'--, dead, 276 days	173.5
TCGA-CQ-6221-01A	79 years, male, white, stage:'--, alive, 1000 days	173.2
TCGA-D6-6515-01A	82 years, female, white, stage:Stage II, dead, 403 days	172.8
TCGA-CV-7440-01A	38 years, male, white, stage:Stage II, dead, 675 days	171.8
TCGA-CV-A6JU-01A	61 years, female, white, stage:Stage IVB, alive, 110 days	169.0
TCGA-BB-A5HU-01A	47 years, male, white, stage:Stage IVA, alive, 782 days	168.9
TCGA-F7-A61W-01A	51 years, male, asian, stage:Stage IVA, alive, 14 days	167.7
TCGA-CN-6019-01A	61 years, male, white, stage:Stage IVA, alive, 1038 days	167.2
TCGA-CV-7245-01A	62 years, male, white, stage:Stage IVA, alive, 797 days	166.6
TCGA-D6-A4Z9-01A	59 years, male, white, stage:Stage IVA, alive, 539 days	165.1
TCGA-CV-6951-01A	57 years, male, white, stage:Stage IVA, dead, 915 days	165.0
TCGA-UF-A7JC-01A	42 years, male, white, stage:Stage IVA, dead, 546 days	164.9
TCGA-MT-A67D-01A	55 years, male, white, stage:Stage II, alive, 56 days	164.3
TCGA-F7-A623-01A	70 years, male, white, stage:Stage IVA, alive, 616 days	161.3
TCGA-CQ-7068-01A	80 years, female, white, stage:Stage II, alive, 1309 days	157.7
TCGA-CX-A4AQ-01A	56 years, male, white, stage:Stage IVA, alive, 1555 days	156.6
TCGA-CV-6436-01A	62 years, male, white, stage:Stage IVA, alive, 1899 days	156.3
TCGA-CR-7369-01A	59 years, male, white, stage:Stage IVA, dead, 1090 days	153.9
TCGA-CN-6994-01A	67 years, male, white, stage:Stage IVA, alive, 1183 days	153.2
TCGA-CV-A468-01A	42 years, male, stage:Stage IVA, dead, 464 days	153.1
TCGA-CQ-6218-01A	52 years, female, white, stage:Stage IVA, alive, 1253 days	153.1
TCGA-QK-A8ZB-01A	68 years, male, black or african american, stage:Stage IVA, alive, 542 days	151.6
TCGA-UF-A7JF-01A	80 years, male, white, stage:Stage IVA, alive, 1686 days	150.4
TCGA-CR-7402-01A	68 years, male, white, stage:'--, alive, 911 days	148.6
TCGA-CR-6477-01A	56 years, female, white, stage:'--, alive, 514 days	148.2
TCGA-CR-7367-01A	52 years, male, white, stage:Stage IVA, alive, 1440 days	147.3
TCGA-HD-8314-01A	58 years, male, white, stage:Stage III, alive, 670 days	146.1
TCGA-BA-A4IH-01A	57 years, male, white, stage:'--, alive, 622 days	145.9
TCGA-D6-A6EP-01A	62 years, male, white, stage:Stage III, alive, 424 days	144.4
TCGA-BA-7269-01A	61 years, male, white, stage:Stage III, alive, 1273 days	143.8
TCGA-P3-A5QA-01A	41 years, male, stage:Stage I, alive, 2182 days	141.7
TCGA-CN-A63W-01A	48 years, female, white, stage:Stage IVA, dead, 377 days	141.6
TCGA-CV-7411-01A	64 years, female, white, stage:Stage IVA, dead, 2717 days	138.2
TCGA-KU-A66T-01A	53 years, female, white, stage:Stage IVA, alive, 552 days	135.9
TCGA-CV-5432-01A	68 years, male, white, stage:Stage III, alive, 3930 days	134.2
TCGA-CN-5359-01A	59 years, male, white, stage:Stage IVA, dead, 377 days	133.4
TCGA-CQ-5324-01A	59 years, male, white, stage:Stage III, alive, 1593 days	133.2
TCGA-CX-7086-01A	53 years, male, black or african american, stage:Stage III, alive, 573 days	131.4
TCGA-HD-A633-01A	74 years, male, white, stage:Stage IVA, alive, 421 days	131.0
TCGA-BA-A6DJ-01A	62 years, male, asian, stage:Stage IVA, dead, 407 days	130.1
TCGA-CR-7382-01A	49 years, male, white, stage:Stage IVA, alive, 796 days	129.1
TCGA-IQ-A61O-01A	43 years, male, white, stage:Stage IVA, dead, 421 days	129.0
TCGA-CR-7398-01A	53 years, female, white, stage:Stage II, alive, 156 days	128.1
TCGA-CR-7386-01A	69 years, male, white, stage:Stage IVA, alive, 1430 days	126.6
TCGA-BA-A6D8-01A	59 years, male, black or african american, stage:Stage IVA, alive, 850 days	126.3
TCGA-CN-6021-01A	63 years, female, white, stage:'--, dead, 276 days	123.8
TCGA-D6-A74Q-01A	67 years, male, white, stage:Stage IVA, alive, 710 days	122.5
TCGA-CR-7371-01A	45 years, female, white, stage:Stage III, dead, 94 days	122.3
TCGA-CN-6011-01A	57 years, male, white, stage:Stage IVA, alive, 933 days	122.3
TCGA-CN-5373-01A	55 years, female, white, stage:Stage I, alive, 1584 days	121.9
TCGA-TN-A7HI-01A	56 years, male, white, stage:Stage IVA, alive, 412 days	121.4
TCGA-CN-6016-01A	64 years, male, white, stage:Stage IVA, alive, 1443 days	119.9
TCGA-CQ-A4CI-01A	73 years, male, white, stage:Stage III, alive, 950 days	117.6
TCGA-BA-5557-01A	41 years, female, stage:Stage III, alive, 623 days	115.6
TCGA-CR-5249-01A	35 years, female, white, stage:Stage II, alive, 1152 days	115.5
TCGA-CV-6960-01A	49 years, male, black or african american, stage:Stage III, dead, 862 days	114.2
TCGA-CV-7091-01A	54 years, male, white, stage:Stage I, alive, 3381 days	109.7
TCGA-CR-7364-01A	66 years, male, white, stage:Stage III, alive, 1435 days	109.4
TCGA-BB-4227-01A	66 years, male, white, stage:Stage IVA, alive, 134 days	107.2
TCGA-CV-7248-01A	63 years, female, black or african american, stage:Stage IVA, dead, 521 days	107.1
TCGA-F7-7848-01A	47 years, male, white, stage:Stage IVA, alive, 1131 days	105.5
TCGA-UF-A7J9-01A	75 years, male, white, stage:Stage IVA, alive, 1358 days	104.8
TCGA-CN-4735-01A	52 years, male, white, stage:Stage IVA, alive, 1737 days	103.4
TCGA-CR-7379-01A	78 years, female, white, stage:Stage IVA, alive, 1036 days	102.8
TCGA-CR-6491-01A	60 years, male, black or african american, stage:Stage IVA, alive, 693 days	102.2
TCGA-CQ-5327-01A	61 years, female, asian, stage:Stage IVA, alive, 1660 days	102.1
TCGA-BB-4223-01A	48 years, male, white, stage:Stage IVA, alive, 3221 days	100.7
TCGA-CV-6935-01A	67 years, male, white, stage:Stage IVA, dead, 295 days	100.2
TCGA-UF-A71A-01A	67 years, male, white, stage:Stage IVA, dead, 86 days	99.7
TCGA-T2-A6X0-01A	49 years, male, white, stage:'--, alive, 216 days	99.0
TCGA-CV-6942-01A	73 years, female, white, stage:Stage II, alive, 4282 days	98.0
TCGA-C9-A480-01A	45 years, female, asian, stage:Stage III, alive, 386 days	97.2
TCGA-CV-7177-01A	82 years, female, white, stage:Stage II, dead, 663 days	96.6
TCGA-CQ-6222-01A	63 years, male, white, stage:Stage IVA, alive, 2016 days	94.1
TCGA-CV-6441-01A	60 years, male, white, stage:Stage III, dead, 292 days	94.0
TCGA-CQ-6228-01A	71 years, female, white, stage:Stage IVA, dead, 456 days	93.5
TCGA-HD-A6HZ-01A	79 years, female, white, stage:Stage III, alive, 111 days	93.3
TCGA-HD-7754-01A	69 years, male, white, stage:Stage IVA, alive, 783 days	93.3
TCGA-UF-A71E-01A	63 years, male, white, stage:Stage IVA, dead, 1504 days	92.5
TCGA-BA-4074-01A	69 years, male, white, stage:Stage IVA, dead, 462 days	91.3
TCGA-CN-4727-01A	56 years, male, white, stage:Stage IVA, alive, 1560 days	90.1
TCGA-CN-4730-01A	62 years, male, white, stage:Stage IVA, alive, 817 days	89.1
TCGA-F7-A50G-01A	66 years, male, white, stage:Stage III, alive, 616 days	87.9
TCGA-CN-6010-01A	53 years, male, white, stage:Stage IVA, alive, 1523 days	86.6
TCGA-QK-A8Z8-01A	60 years, female, black or african american, stage:Stage IVC, dead, 171 days	86.4
TCGA-BB-4217-01A	68 years, male, black or african american, stage:Stage IVA, alive, 187 days	86.4
TCGA-IQ-A61H-01A	76 years, male, white, stage:Stage II, alive, 1138 days	86.4
TCGA-CV-5978-01A	53 years, female, black or african american, stage:Stage IVB, dead, 215 days	86.2
TCGA-CR-7401-01A	64 years, male, white, stage:Stage I, alive, 1077 days	83.2
TCGA-C9-A47Z-01A	72 years, female, asian, stage:Stage III, dead, 191 days	82.9
TCGA-D6-6826-01A	64 years, female, white, stage:Stage IVA, dead, 348 days	81.9
TCGA-CV-7238-01A	69 years, female, white, stage:Stage II, alive, 2727 days	80.7
TCGA-CV-7263-01A	64 years, male, black or african american, stage:Stage II, dead, 560 days	79.9
TCGA-DQ-5630-01A	73 years, male, white, stage:'--, alive, 1030 days	76.6
TCGA-CV-6940-01A	80 years, female, white, stage:Stage III, dead, 804 days	76.4
TCGA-CV-7101-01A	80 years, male, white, stage:Stage II, dead, 160 days	74.9
TCGA-P3-A6T6-01A	53 years, male, white, stage:Stage IVA, dead, 395 days	73.7
TCGA-BB-4225-01A	73 years, male, white, stage:'--, alive, 146 days	73.0
TCGA-CV-A45Z-01A	75 years, male, white, stage:'--, dead, 1466 days	72.5
TCGA-CR-5243-01A	51 years, male, white, stage:'--, alive, 2562 days	72.2
TCGA-MT-A7BN-01A	74 years, male, white, stage:Stage IVA, alive, 469 days	66.4
TCGA-CR-7391-01A	36 years, female, white, stage:Stage I, alive, 913 days	66.3
TCGA-D6-A6EO-01A	44 years, male, white, stage:Stage IVA, alive, 759 days	66.2
TCGA-CR-6467-01A	59 years, male, white, stage:Stage III, alive, 1777 days	65.5
TCGA-CN-4738-01A	53 years, male, white, stage:Stage IVA, dead, 436 days	65.4
TCGA-CN-4726-01A	68 years, male, white, stage:Stage IVA, dead, 142 days	65.1
TCGA-MZ-A7D7-01A	51 years, male, white, stage:Stage IVA, alive, 547 days	65.0
TCGA-CV-7100-01A	66 years, male, white, stage:Stage III, dead, 274 days	65.0
TCGA-CX-7082-01A	82 years, male, white, stage:Stage IVA, dead, 11 days	64.5
TCGA-CV-7102-01A	76 years, female, white, stage:Stage IVA, dead, 56 days	63.2
TCGA-CV-7414-01A	78 years, male, white, stage:Stage IVA, dead, 14 days	62.6
TCGA-IQ-7631-01A	60 years, female, white, stage:Stage II, alive, 1172 days	62.4
TCGA-HD-8634-01A	51 years, female, white, stage:Stage I, dead, 385 days	61.0
TCGA-D6-6827-01A	55 years, female, white, stage:Stage I, alive, 568 days	60.1
TCGA-CR-7368-01A	54 years, male, white, stage:Stage IVA, alive, 1245 days	59.7
TCGA-BB-8596-01A	69 years, female, white, stage:Stage IVA, alive, 2161 days	57.7
TCGA-CV-7103-01A	49 years, male, white, stage:Stage IVA, dead, 1591 days	57.3
TCGA-HD-A4C1-01A	41 years, female, black or african american, stage:Stage IVA, alive, 11 days	57.2
TCGA-CQ-6225-01A	65 years, male, white, stage:Stage III, dead, 403 days	56.3
TCGA-CV-7254-01A	55 years, male, white, stage:Stage II, dead, 1459 days	55.8
TCGA-CV-5431-01A	73 years, male, white, stage:Stage IVA, dead, 522 days	55.5
TCGA-DQ-5624-01A	43 years, female, white, stage:'--, alive, 1778 days	53.1
TCGA-P3-A6SX-01A	67 years, male, white, stage:Stage III, dead, 1430 days	52.9
TCGA-KU-A66S-01A	69 years, female, white, stage:Stage III, dead, 406 days	52.0
TCGA-CN-6992-01A	61 years, male, white, stage:Stage IVA, alive, 1066 days	51.5
TCGA-HD-8224-01A	63 years, male, white, stage:Stage IVA, dead, 446 days	51.0
TCGA-CV-7413-01A	74 years, female, white, stage:Stage II, dead, 294 days	49.8
TCGA-CV-7428-01A	47 years, male, white, stage:Stage IVA, dead, 1671 days	46.6
TCGA-CV-7416-01A	29 years, female, white, stage:Stage IVA, dead, 763 days	46.1
TCGA-CN-5364-01A	55 years, male, white, stage:Stage IVA, dead, 493 days	45.8
TCGA-QK-A6IF-01A	61 years, male, white, stage:'--, alive, 704 days	44.9
TCGA-BB-A6UM-01A	52 years, male, white, stage:Stage III, alive, 393 days	43.6
TCGA-CQ-5323-01A	82 years, male, white, stage:Stage I, alive, 1466 days	42.1
TCGA-UF-A71D-01A	54 years, female, white, stage:Stage IVA, alive, 1461 days	41.2
TCGA-CQ-A4CG-01A	78 years, female, white, stage:Stage III, dead, 430 days	40.3
TCGA-H7-8502-01A	50 years, male, white, stage:Stage IVA, alive, 458 days	39.3
TCGA-IQ-A61G-01A	57 years, male, white, stage:Stage IVA, alive, 360 days	39.2
TCGA-CV-A45V-01A	87 years, female, white, stage:Stage IVA, dead, 32 days	37.0
TCGA-CV-7255-01A	32 years, female, white, stage:Stage IVA, dead, 64 days	36.7
TCGA-CQ-5332-01A	87 years, male, white, stage:Stage III, dead, 317 days	36.3
TCGA-CV-5436-01A	65 years, male, stage:Stage IVA, dead, 584 days	36.3
TCGA-CR-7390-01A	67 years, male, white, stage:Stage IVA, alive, 1508 days	36.2
TCGA-P3-A6T0-01A	47 years, female, white, stage:Stage IVA, alive, 578 days	36.1
TCGA-CR-6478-01A	66 years, female, white, stage:'--, dead, 183 days	35.2
TCGA-CQ-A4CD-01A	69 years, male, white, stage:Stage IVA, alive, 1022 days	33.2
TCGA-IQ-A61E-01A	55 years, female, white, stage:Stage III, alive, 1147 days	32.6
TCGA-CV-7418-01A	62 years, male, black or african american, stage:Stage IVA, dead, 789 days	32.1
TCGA-CV-6948-01A	79 years, female, white, stage:Stage IVB, dead, 1289 days	32.0
TCGA-CN-4741-01A	75 years, male, white, stage:Stage IVA, alive, 2239 days	31.0
TCGA-HD-A634-01A	56 years, male, white, stage:Stage IVA, dead, 130 days	29.2
TCGA-CV-7250-01A	64 years, male, white, stage:Stage IVA, dead, 2900 days	28.5
TCGA-CV-7430-01A	56 years, male, white, stage:Stage IVA, dead, 495 days	28.3
TCGA-UF-A7JD-01A	71 years, male, stage:Stage IVA, dead, 739 days	27.7
TCGA-CV-7434-01A	64 years, male, white, stage:Stage IVA, dead, 218 days	27.0
TCGA-CV-A45Q-01A	69 years, female, white, stage:'--, dead, 5152 days	26.6
TCGA-MT-A67A-01A	85 years, female, white, stage:Stage I, alive, 914 days	21.9
TCGA-CV-7406-01A	49 years, male, white, stage:Stage II, dead, 1748 days	20.9
TCGA-BA-5152-01A	56 years, male, white, stage:Stage IVA, alive, 1288 days	20.5
TCGA-BB-8601-01A	84 years, male, black or african american, stage:Stage III, alive, 624 days	19.1
TCGA-DQ-7591-01A	62 years, male, white, stage:'--, alive, 622 days	18.3
TCGA-CN-6018-01A	85 years, female, white, stage:Stage IVA, dead, 580 days	15.7
TCGA-BA-4076-01A	39 years, male, white, stage:'--, dead, 415 days	12.1
TCGA-CV-7423-01A	65 years, male, white, stage:Stage II, dead, 3059 days	10.2
TCGA-P3-A5Q6-01A	49 years, male, white, stage:Stage IVA, dead, 480 days	9.5
TCGA-CV-6962-01A	65 years, male, white, stage:Stage IVA, dead, 126 days	5.1
TCGA-CV-6003-01A	50 years, female, white, stage:Stage III, alive, 1665 days	4.7
TCGA-CV-A45X-01A	47 years, male, white, stage:Stage IVA, dead, 198 days	3.1
TCGA-HD-A6I0-01A	56 years, male, white, stage:Stage IVA, alive, 210 days	3.0
TCGA-CN-5365-01A	38 years, male, white, stage:Stage IVB, dead, 351 days	2.1
TCGA-TN-A7HL-01A	59 years, male, white, stage:Stage IVA, alive, 619 days	2.0
TCGA-CN-5369-01A	90 years, female, white, stage:Stage IVA, dead, 1 days	1.9
TCGA-CV-A6JY-01A	69 years, male, white, stage:Stage IVA, alive, 646 days	1.8
TCGA-D6-A6ES-01A	50 years, male, white, stage:Stage IVA, alive, 389 days	1.8
TCGA-BA-A6DE-01A	70 years, female, white, stage:Stage II, alive, 440 days	1.7
TCGA-D6-A6EN-01A	71 years, male, white, stage:Stage III, alive, 687 days	1.6
TCGA-CR-7377-01A	58 years, male, white, stage:Stage IVA, dead, 279 days	1.6
TCGA-CN-5367-01A	60 years, female, white, stage:Stage IVA, dead, 352 days	1.5
TCGA-CV-7427-01A	73 years, female, white, stage:Stage II, dead, 4760 days	1.5
TCGA-CN-5366-01A	51 years, male, white, stage:Stage IVA, dead, 360 days	1.4
TCGA-CN-4740-01A	79 years, female, white, stage:Stage IVA, dead, 839 days	1.4
TCGA-D6-6823-01A	50 years, male, white, stage:Stage II, alive, 701 days	1.3
TCGA-CR-7373-01A	66 years, male, white, stage:Stage IVA, alive, 889 days	1.3
TCGA-BA-A6DD-01A	44 years, male, black or african american, stage:Stage IVA, dead, 173 days	1.3
TCGA-F7-A50I-01A	72 years, male, white, stage:Stage IVA, alive, 92 days	1.2
TCGA-UF-A7JT-01A	72 years, female, white, stage:Stage IVA, dead, 993 days	1.2
TCGA-CV-6433-01A	57 years, male, white, stage:Stage II, alive, 641 days	1.2
TCGA-CN-4734-01A	70 years, male, white, stage:Stage II, alive, 1690 days	1.1
TCGA-CV-7433-01A	49 years, male, white, stage:Stage IVA, dead, 601 days	1.1
TCGA-CV-7236-01A	77 years, female, white, stage:Stage IVA, dead, 144 days	1.1
TCGA-CR-6471-01A	58 years, male, white, stage:Stage IVA, dead, 1202 days	1.1
TCGA-CV-5970-01A	59 years, male, white, stage:Stage IVA, dead, 406 days	1.0
TCGA-CN-4728-01A	56 years, male, white, stage:Stage IVA, alive, 1724 days	1.0
TCGA-F7-A61V-01A	54 years, male, white, stage:Stage II, alive, 759 days	1.0
TCGA-D6-A4ZB-01A	61 years, male, white, stage:Stage III, alive, 376 days	1.0
TCGA-CV-7435-01A	57 years, female, white, stage:Stage IVA, dead, 4680 days	1.0
TCGA-CQ-6223-01A	69 years, male, white, stage:Stage II, alive, 1428 days	1.0
TCGA-P3-A5QF-01A	49 years, male, white, stage:Stage IVA, dead, 330 days	1.0
TCGA-CR-6493-01A	69 years, male, black or african american, stage:Stage IVA, dead, 282 days	1.0
TCGA-QK-A64Z-01A	79 years, female, white, stage:Stage IVA, dead, 641 days	1.0
TCGA-CN-4723-01A	67 years, male, white, stage:Stage IVA, alive, 1699 days	0.9
TCGA-CV-A6JT-01A	65 years, male, white, stage:Stage II, alive, 852 days	0.9
TCGA-CV-7178-01A	64 years, female, white, stage:Stage IVA, dead, 2166 days	0.9
TCGA-BA-6869-01A	62 years, male, white, stage:Stage III, alive, 644 days	0.9
TCGA-CN-6012-01A	66 years, male, white, stage:Stage IVA, alive, 1460 days	0.9
TCGA-CV-7415-01A	60 years, male, white, stage:Stage IVA, dead, 695 days	0.9
TCGA-T2-A6WZ-01A	53 years, male, white, stage:'--, dead, 484 days	0.9
TCGA-CN-A642-01A	57 years, male, white, stage:Stage IVB, dead, 82 days	0.9
TCGA-CN-5370-01A	78 years, male, white, stage:Stage III, dead, 259 days	0.9
TCGA-F7-8298-01A	58 years, male, white, stage:Stage I, alive, 995 days	0.9
TCGA-CV-7438-01A	87 years, female, white, stage:Stage I, dead, 194 days	0.8
TCGA-CR-6492-01A	78 years, male, white, stage:Stage III, alive, 479 days	0.8
TCGA-CV-6941-01A	51 years, male, white, stage:Stage III, dead, 342 days	0.8
TCGA-CR-6484-01A	67 years, female, asian, stage:Stage IVA, alive, 354 days	0.8
TCGA-DQ-5629-01A	64 years, male, white, stage:'--, dead, 941 days	0.8
TCGA-BA-A6DA-01A	41 years, female, white, stage:Stage IVA, alive, 351 days	0.8
TCGA-BB-A5HZ-01A	65 years, male, white, stage:Stage IVA, alive, 827 days	0.8
TCGA-CV-5443-01A	63 years, male, black or african american, stage:Stage III, alive, 2784 days	0.8
TCGA-CV-7235-01A	67 years, male, white, stage:Stage II, alive, 2347 days	0.8
TCGA-UF-A7JK-01A	59 years, male, stage:Stage IVA, dead, 424 days	0.8
TCGA-CV-6953-01A	80 years, female, white, stage:Stage III, dead, 1641 days	0.7
TCGA-BA-5555-01A	54 years, male, black or african american, stage:Stage IVA, alive, 520 days	0.7
TCGA-CN-5356-01A	56 years, male, white, stage:Stage III, alive, 1409 days	0.7
TCGA-MZ-A5BI-01A	53 years, male, white, stage:'--, dead, 217 days	0.7
TCGA-KU-A6H8-01A	41 years, male, white, stage:Stage IVA, dead, 327 days	0.7
TCGA-CQ-A4C9-01A	56 years, male, stage:Stage III, alive, 707 days	0.7
TCGA-CN-4729-01A	73 years, male, white, stage:Stage III, alive, 392 days	0.7
TCGA-HD-7832-01A	52 years, male, white, stage:Stage IVA, alive, 836 days	0.7
TCGA-CR-6482-01A	62 years, male, black or african american, stage:'--, alive, 345 days	0.7
TCGA-BA-A6DL-01A	59 years, male, white, stage:'--, alive, 623 days	0.6
TCGA-CR-6472-01A	59 years, male, white, stage:'--, alive, 1050 days	0.6
TCGA-WA-A7H4-01A	69 years, male, white, stage:Stage II, alive, 443 days	0.6
TCGA-BA-6871-01A	75 years, male, white, stage:'--, dead, 108 days	0.6
TCGA-TN-A7HJ-01A	51 years, male, white, stage:Stage IVA, alive, 403 days	0.6
TCGA-CR-7365-01A	60 years, male, white, stage:Stage IVA, alive, 1191 days	0.6
TCGA-UF-A7JJ-01A	68 years, male, stage:Stage IVA, alive, 549 days	0.6
TCGA-IQ-7630-01A	49 years, male, white, stage:Stage II, alive, 485 days	0.6
TCGA-CR-7376-01A	83 years, male, white, stage:Stage III, alive, 972 days	0.6
TCGA-CN-6013-01A	56 years, male, white, stage:Stage IVA, dead, 727 days	0.6
TCGA-UF-A7JA-01A	66 years, female, white, stage:Stage IVA, alive, 2265 days	0.6
TCGA-CV-5441-01A	58 years, male, white, stage:Stage IVA, alive, 2886 days	0.6
TCGA-CN-5355-01A	64 years, male, black or african american, stage:Stage IVA, alive, 1278 days	0.6
TCGA-CV-A460-01A	72 years, male, white, stage:'--, dead, 1838 days	0.5
TCGA-CN-4739-01A	71 years, male, white, stage:Stage IVA, dead, 1394 days	0.5
TCGA-CV-6955-01A	74 years, female, white, stage:Stage II, dead, 334 days	0.5
TCGA-CR-7394-01A	70 years, male, white, stage:Stage IVA, alive, 1346 days	0.5
TCGA-DQ-7588-01A	66 years, male, white, stage:'--, dead, 427 days	0.5
TCGA-BA-5153-01A	51 years, male, white, stage:'--, dead, 1762 days	0.5
TCGA-QK-A6IH-01A	65 years, female, white, stage:Stage IVB, alive, 653 days	0.5
TCGA-DQ-5631-01A	52 years, male, white, stage:'--, dead, 548 days	0.5
TCGA-BA-A4IG-01A	77 years, male, white, stage:'--, alive, 855 days	0.5
TCGA-UF-A71B-01A	50 years, male, white, stage:Stage IVA, alive, 1506 days	0.5
TCGA-CV-6936-01A	68 years, male, white, stage:Stage IVA, dead, 166 days	0.4
TCGA-CV-A45U-01A	59 years, male, white, stage:Stage IVA, dead, 1079 days	0.4
TCGA-QK-AA3J-01A	69 years, male, black or african american, stage:Stage I, alive, 466 days	0.4
TCGA-CN-4742-01A	48 years, female, white, stage:Stage IVA, dead, 397 days	0.4
TCGA-D6-6516-01A	69 years, male, white, stage:Stage I, alive, 773 days	0.4
TCGA-CR-7395-01A	80 years, female, white, stage:Stage II, alive, 930 days	0.4
TCGA-UF-A7JH-01A	59 years, male, black or african american, stage:Stage IVA, alive, 896 days	0.4
TCGA-CV-A45R-01A	46 years, male, white, stage:Stage III, alive, 5480 days	0.4
TCGA-WA-A7GZ-01A	58 years, male, white, stage:'--, dead, 625 days	0.4
TCGA-QK-A6V9-01A	56 years, male, white, stage:Stage II, alive, 833 days	0.4
TCGA-BA-5151-01A	72 years, male, white, stage:Stage IVA, alive, 722 days	0.4
TCGA-D6-A6EK-01A	67 years, male, white, stage:Stage III, alive, 875 days	0.4
TCGA-CV-7090-01A	39 years, male, white, stage:Stage II, alive, 5252 days	0.4
TCGA-IQ-A61I-01A	63 years, male, black or african american, stage:Stage IVA, dead, 2 days	0.4
TCGA-MT-A51X-01A	30 years, male, white, stage:Stage IVA, alive, 242 days	0.4
TCGA-CV-7252-01A	62 years, female, black or african american, stage:Stage IVA, dead, 151 days	0.4
TCGA-CV-6939-01A	60 years, male, white, stage:Stage IVA, dead, 666 days	0.4
TCGA-CN-6989-01A	64 years, male, white, stage:Stage IVA, dead, 980 days	0.3
TCGA-QK-A6VB-01A	66 years, male, white, stage:Stage IVA, alive, 641 days	0.3
TCGA-CV-7253-01A	58 years, male, black or african american, stage:Stage IVA, dead, 361 days	0.3
TCGA-CR-6473-01A	68 years, male, white, stage:'--, alive, 1125 days	0.3
TCGA-CN-5374-01A	56 years, female, white, stage:Stage IVA, dead, 1732 days	0.3
TCGA-CQ-6219-01A	50 years, female, white, stage:Stage IVA, dead, 479 days	0.3
TCGA-BA-A8YP-01A	50 years, male, black or african american, stage:Stage IVB, alive, 499 days	0.3
TCGA-CV-A45O-01A	57 years, male, white, stage:'--, alive, 851 days	0.3
TCGA-CV-7568-01A	48 years, female, white, stage:Stage IVA, dead, 927 days	0.3
TCGA-CQ-A4CB-01A	59 years, male, stage:Stage III, alive, 893 days	0.3
TCGA-CV-6952-01A	65 years, female, white, stage:Stage IVA, dead, 185 days	0.3
TCGA-CN-A63V-01A	59 years, male, white, stage:Stage IVA, alive, 679 days	0.3
TCGA-CV-A45P-01A	82 years, female, white, stage:Stage I, alive, 639 days	0.3
TCGA-QK-A6IG-01A	69 years, male, white, stage:Stage III, dead, 222 days	0.3
TCGA-CQ-6220-01A	69 years, male, white, stage:Stage III, dead, 985 days	0.3
TCGA-UP-A6WW-01A	58 years, male, white, stage:'--, alive, 518 days	0.3
TCGA-CV-5442-01A	76 years, female, white, stage:Stage IVA, alive, 2327 days	0.3
TCGA-CV-A6JN-01A	53 years, male, white, stage:'--, alive, 906 days	0.3
TCGA-IQ-A61J-01A	54 years, male, white, stage:Stage IVA, alive, 1021 days	0.2
TCGA-CV-7095-01A	87 years, female, stage:Stage II, dead, 572 days	0.2
TCGA-CR-6470-01A	38 years, male, white, stage:Stage II, alive, 1521 days	0.2
TCGA-CV-7097-01A	53 years, male, white, stage:Stage II, dead, 385 days	0.2
TCGA-P3-A6T8-01A	54 years, male, white, stage:Stage IVA, alive, 400 days	0.2
TCGA-D6-6517-01A	59 years, male, white, stage:Stage III, alive, 292 days	0.2
TCGA-DQ-7592-01A	57 years, male, american indian or alaska native, stage:'--, alive, 1143 days	0.2
TCGA-BA-4075-01A	49 years, male, black or african american, stage:Stage III, dead, 283 days	0.2
TCGA-F7-A622-01A	75 years, male, white, stage:Stage III, dead, 359 days	0.2
TCGA-CV-7432-01A	79 years, male, white, stage:Stage II, dead, 2570 days	0.2
TCGA-CQ-7072-01A	51 years, male, white, stage:Stage II, alive, 2359 days	0.2
TCGA-QK-A6VC-01A	62 years, female, black or african american, stage:Stage IVA, alive, 600 days	0.2
TCGA-CR-7397-01A	44 years, male, white, stage:Stage IVA, alive, 754 days	0.1
TCGA-MZ-A6I9-01A	68 years, male, white, stage:'--, dead, 489 days	0.1
TCGA-CV-5976-01A	50 years, male, white, stage:Stage IVA, alive, 1478 days	0.1
TCGA-CN-A641-01A	47 years, male, white, stage:Stage IVA, alive, 367 days	0.1
TCGA-CN-6988-01A	47 years, male, white, stage:Stage IVA, alive, 318 days	0.1
TCGA-CV-7421-01A	76 years, male, white, stage:Stage IVA, dead, 2 days	0.1
TCGA-CV-7183-01A	53 years, male, white, stage:Stage II, alive, 3981 days	0.1
TCGA-CV-7407-01A	67 years, female, white, stage:Stage II, dead, 1081 days	0.1
TCGA-CN-4725-01A	60 years, male, white, stage:Stage II, alive, 1157 days	0.1
TCGA-CQ-6229-01A	61 years, male, white, stage:Stage II, alive, 1179 days	0.1
TCGA-CN-4722-01A	61 years, female, white, stage:Stage II, alive, 1483 days	0.1
TCGA-QK-A6IJ-01A	71 years, male, white, stage:Stage III, alive, 387 days	0.0
TCGA-CV-7446-01A	66 years, male, white, stage:Stage IVA, dead, 1093 days	0.0
TCGA-CN-A497-01A	63 years, male, stage:Stage III, alive, 1065 days	0.0
TCGA-IQ-7632-01A	68 years, female, white, stage:Stage IVA, alive, 441 days	0.0
TCGA-4P-AA8J-01A	66 years, male, black or african american, stage:Stage IVA, alive, 102 days	0.0
TCGA-QK-A8ZA-01A	60 years, male, black or african american, stage:'--, dead, 371 days	0.0
TCGA-QK-A8Z7-01A	59 years, male, black or african american, stage:Stage IVA, alive, 392 days	0.0
TCGA-BA-6872-01A	47 years, male, white, stage:'--, dead, 384 days	0.0
TCGA-UF-A7JO-01A	79 years, female, white, stage:Stage IVA, dead, 631 days	0.0
TCGA-CR-5250-01A	71 years, male, white, stage:'--, alive, 799 days	0.0
TCGA-CN-A498-01A	61 years, female, white, stage:Stage III, dead, 773 days	0.0
TCGA-CN-A499-01A	60 years, female, white, stage:Stage II, alive, 717 days	0.0
TCGA-BA-A6DB-01A	24 years, female, white, stage:Stage I, alive, 216 days	0.0
TCGA-CQ-7069-01A	77 years, female, white, stage:Stage II, alive, 1274 days	0.0
TCGA-CN-6024-01A	66 years, male, white, stage:Stage IVA, dead, 337 days	0.0
TCGA-HD-7831-01A	74 years, male, white, stage:Stage IVA, alive, 667 days	0.0
TCGA-CN-A49C-01A	67 years, male, white, stage:'--, alive, 645 days	0.0
TCGA-CV-7247-01A	55 years, male, white, stage:Stage III, dead, 577 days	0.0
TCGA-CN-A6V7-01A	40 years, male, white, stage:Stage IVA, alive, 594 days	0.0
TCGA-CV-7437-01A	77 years, male, stage:Stage II, dead, 506 days	0.0
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
CPT0088410003	Tumor	1.5
CPT0246620003	Tumor	1.3
CPT0184530003	Tumor	1.3
CPT0177010003	Tumor	1.3
CPT0236850004	Tumor	1.1
CPT0237620004	Tumor	1.0
CPT0163600003	Tumor	1.0
CPT0163790003	Tumor	1.0
CPT0008630003	Tumor	0.9
CPT0163740003	Tumor	0.9
CPT0163720003	Normal	0.9
CPT0087820003	Tumor	0.7
CPT0194800003	Normal	0.6
CPT0241980004	Tumor	0.6
CPT0095040003	Tumor	0.6
CPT0024810003	Tumor	0.5
CPT0094280004	Tumor	0.5
CPT0226250004	Tumor	0.5
CPT0088060004	Tumor	0.5
CPT0245180003	Tumor	0.5
CPT0163650003	Tumor	0.4
CPT0196210003	Tumor	0.4
CPT0013210004	Tumor	0.3
CPT0177200003	Tumor	0.3
CPT0199700003	Tumor	0.3
CPT0226440003	Tumor	0.3
CPT0194960003	Tumor	0.3
CPT0163240003	Tumor	0.3
CPT0226130003	Tumor	0.3
CPT0163090003	Tumor	0.3
CPT0163480003	Tumor	0.3
CPT0245500003	Tumor	0.2
CPT0245130003	Tumor	0.2
CPT0207870004	Tumor	0.2
CPT0084630009	Tumor	0.2
CPT0244890004	Tumor	0.2
CPT0177390003	Tumor	0.2
CPT0235910003	Tumor	0.2
CPT0245730003	Tumor	0.2
CPT0201830004	Tumor	0.2
CPT0222360003	Tumor	0.1
CPT0163340003	Tumor	0.1
CPT0169640003	Tumor	0.1
CPT0194420003	Tumor	0.1
CPT0196040003	Tumor	0.1
CPT0245230004	Tumor	0.1
CPT0169730003	Tumor	0.1
CPT0199710003	Normal	0.1
CPT0248330003	Tumor	0.1
CPT0245400003	Tumor	0.0
CPT0226030003	Tumor	0.0
CPT0087990003	Tumor	0.0
CPT0245300003	Tumor	0.0
CPT0226390003	Tumor	0.0
CPT0195860003	Tumor	0.0
CPT0236620003	Tumor	-0.1
CPT0281470002	Normal	-0.1
CPT0223970003	Tumor	-0.1
CPT0261520003	Tumor	-0.1
CPT0244940004	Tumor	-0.1
CPT0176770003	Tumor	-0.1
CPT0243090003	Tumor	-0.1
CPT0163910003	Tumor	-0.1
CPT0246590003	Tumor	-0.2
CPT0237130004	Tumor	-0.2
CPT0245680003	Tumor	-0.2
CPT0194790003	Tumor	-0.2
CPT0245550003	Tumor	-0.2
CPT0245010003	Tumor	-0.2
CPT0237480004	Tumor	-0.2
CPT0199880003	Tumor	-0.2
CPT0246540003	Tumor	-0.2
CPT0223450003	Tumor	-0.3
CPT0177710003	Tumor	-0.3
CPT0013030003	Normal	-0.3
CPT0248520003	Tumor	-0.3
CPT0013000004	Tumor	-0.3
CPT0235460003	Tumor	-0.3
CPT0008930003	Tumor	-0.3
CPT0163840003	Tumor	-0.4
CPT0245410003	Normal	-0.4
CPT0163800003	Normal	-0.4
CPT0094560004	Tumor	-0.4
C3N-02693-06	Normal	-0.4
CPT0169890003	Tumor	-0.4
CPT0094420004	Tumor	-0.4
CPT0162940003	Tumor	-0.4
CPT0123260003	Tumor	-0.4
CPT0245450003	Tumor	-0.4
CPT0013250003	Normal	-0.5
CPT0163410003	Tumor	-0.5
CPT0163160003	Tumor	-0.5
CPT0123180003	Tumor	-0.5
C3N-04275-05	Normal	-0.5
CPT0220620003	Normal	-0.5
CPT0220610003	Tumor	-0.5
CPT0013430003	Tumor	-0.5
CPT0011290003	Tumor	-0.6
CPT0222180003	Tumor	-0.6
CPT0236870003	Normal	-0.6
CPT0226090003	Normal	-0.6
CPT0245460003	Normal	-0.6
CPT0237500003	Normal	-0.6
CPT0245630003	Tumor	-0.6
CPT0088430003	Normal	-0.6
CPT0245020003	Normal	-0.6
C3N-01620-05	Normal	-0.7
CPT0245140003	Normal	-0.7
CPT0011130005	Tumor	-0.7
CPT0088080003	Normal	-0.7
C3N-04276-06	Normal	-0.7
CPT0094490004	Tumor	-0.7
CPT0237150003	Normal	-0.7
CPT0245190003	Normal	-0.7
CPT0235920003	Normal	-0.7
CPT0226400003	Normal	-0.8
CPT0163530003	Tumor	-0.8
CPT0223460003	Normal	-0.8
CPT0256560003	Tumor	-0.8
CPT0248350003	Normal	-0.8
CPT0194250003	Tumor	-0.8
CPT0013130003	Tumor	-0.8
CPT0226450003	Normal	-0.8
CPT0246670003	Tumor	-0.8
CPT0235470002	Normal	-0.8
CPT0226340003	Tumor	-0.8
CPT0245600003	Tumor	-0.8
CPT0163170003	Normal	-0.8
CPT0094350004	Tumor	-0.8
CPT0013460003	Normal	-0.8
C3N-04279-05	Normal	-0.8
CPT0194260003	Normal	-0.8
CPT0226270003	Normal	-0.8
CPT0195880003	Normal	-0.8
CPT0243140004	Normal	-0.9
CPT0123190003	Normal	-0.9
CPT0084650004	Normal	-0.9
C3N-01758-04	Normal	-0.9
CPT0229220002	Normal	-0.9
CPT0177220003	Normal	-0.9
CPT0199890003	Normal	-0.9
CPT0201860004	Normal	-0.9
CPT0226350003	Normal	-0.9
CPT0163490003	Normal	-1.0
CPT0163430003	Normal	-1.0
CPT0196060003	Normal	-1.0
CPT0169920003	Normal	-1.0
CPT0088010003	Normal	-1.0
CPT0008960003	Normal	-1.0
CPT0199820003	Tumor	-1.0
C3N-01859-04	Normal	-1.0
CPT0162890003	Tumor	-1.0
CPT0011320003	Normal	-1.0
CPT0163250003	Normal	-1.0
CPT0242000004	Normal	-1.0
CPT0008520008	Tumor	-1.0
C3N-00857-05	Normal	-1.1
CPT0163860003	Normal	-1.1
CPT0250310003	Tumor	-1.1
CPT0195700003	Normal	-1.1
CPT0162990004	Tumor	-1.1
CPT0237640003	Normal	-1.1
C3N-00295-05	Normal	-1.1
CPT0245350003	Tumor	-1.1
CPT0190850003	Tumor	-1.1
CPT0127050003	Tumor	-1.2
CPT0236640003	Normal	-1.2
CPT0190860003	Normal	-1.2
CPT0163610003	Normal	-1.2
CPT0195680003	Tumor	-1.2
CPT0169740004	Normal	-1.3
CPT0199830003	Normal	-1.3
CPT0245060004	Tumor	-1.3
CPT0278700002	Normal	-1.3
CPT0245560003	Normal	-1.4
CPT0222200003	Normal	-1.5
CPT0123280003	Normal	-1.5
CPT0163020003	Normal	-1.5
CPT0094580003	Normal	-1.6
CPT0229230003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0229210003	Tumor	N/A
CPT0229190003	Tumor	N/A
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HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA031454	Antibody CAB024589
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Adenocarcinoma, NOS Adenoma, NOS
Squamous cell carcinoma, NOS Squamous cell carcinoma, metastatic, NOS