HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:15.3 nTPM
HPA Brain:1.1 nTPM
GTEx:15.3 nTPM
FANTOM5:44.7 Scaled Tags Per Million
Pig:22.9 nTPM
Mouse:23.5 nTPM
Allen mouse:11.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047248Antibody HPA056756Antibody CAB025501
Glial cells Not detectedLowMedium
Neuronal cells MediumNot detectedMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 1.1
Sample id Sample description nTPM
Hippocampus
nTPM: 0.0
2529 Female, age 94, left hemisphere 0.3
1855 Male, age 76, left hemisphere 0.1
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 0.4
2531 Female, age 67, both hemispheres 2.7
2530 Female, age 94, left hemisphere 0.2
1927 Female, age 91, both hemispheres 0.0
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
Entorhinal gyrus
nTPM: 0.1
1938 Female, age 85, left hemisphere 0.3
2764 Male, age 80, right hemisphere 0.2
1787 Male, age 76, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2613 Female, age 94, left hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.1
1873 Female, age 85, both hemispheres 0.7
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 1.1
1963 Male, age 80, left hemisphere 6.5
1940 Female, age 85, left hemisphere 0.3
1892 Male, age 76, both hemispheres 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 0.2
2861 Female, age 67, both hemispheres 0.8
1867 Male, age 76, both hemispheres 0.4
1891 Female, age 85, both hemispheres 0.1
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
Parahippocampal cortex
nTPM: 0.0
2018 Male, age 76, both hemispheres 0.1
1850 Male, age 80, both hemispheres 0.0
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2245 Female, age 91, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2532 Female, age 72, left hemisphere 0.0
2622 Female, age 67, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
2693 Female, age 94, both hemispheres 0.0
Perirhinal gyrus
nTPM: 0.0
1847 Female, age 91, left hemisphere 0.2
1794 Male, age 80, right hemisphere 0.0
1841 Female, age 85, right hemisphere 0.0
2521 Female, age 94, right hemisphere 0.0
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 0.0
1977 Female, age 85, both hemispheres 0.1
1901 Male, age 80, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 15.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.3
Samples: 197

Max nTPM: 27.3
Min nTPM: 9.0
Std nTPM: 2.9
Median nTPM: 15.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 27.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 25.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 25.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 23.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 23.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 22.9
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 21.9
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 21.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 20.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 20.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 20.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 44.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.7
FF:10169-103B7 60 years, female 58.1
FF:10153-102I9 76 years, female 31.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.9
Pig sample Sample description nTPM
Subiculum
nTPM: 19.4
Samples: 4

Max nTPM: 21.1
Min nTPM: 18.0
Sample A Female 21.1
Sample B Female 18.0
Sample C Male 19.9
Sample D Male 18.4
Dorsal hippocampus
nTPM: 22.9
Samples: 4

Max nTPM: 26.4
Min nTPM: 20.9
Sample A Female 26.4
Sample B Female 20.9
Sample C Male 23.3
Sample D Male 20.9
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 21.1
Min nTPM: 16.9
Sample A Female 21.1
Sample B Female 16.9
Sample C Male 18.6
Sample D Male 19.9
Ventral hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 25.3
Min nTPM: 17.8
Sample A Female 20.4
Sample B Female 17.8
Sample C Male 25.3
Sample D Male 23.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 23.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 24.0
Min nTPM: 20.3
Sample A Male 20.3
Sample B Male 20.4
Sample C Female 21.4
Sample D Female 24.0
Hippocampal formation
nTPM: 23.5
Samples: 4

Max nTPM: 27.0
Min nTPM: 19.1
Sample A Male 19.1
Sample B Male 22.5
Sample C Female 27.0
Sample D Female 25.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.2
68911019 Antisense, RP_050203_02_F09, Mouse strain C57BL/6J (56 days, male) 11.2

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