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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCEA3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
45.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
44.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
37.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
34.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
31.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
31.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
21.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
20.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
19.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
19.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
18.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
18.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
17.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
17.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
16.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
16.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
15.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
14.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
14.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
14.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
13.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
12.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
9.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
9.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
8.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
8.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
8.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
8.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
7.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
5.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
4.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
4.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
4.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
4.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
2.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCEA3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
117.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
116.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
110.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
110.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
109.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
109.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
107.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
106.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
106.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
105.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
105.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
104.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
101.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
99.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
98.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
98.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
97.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
97.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
97.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
97.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
97.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
96.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
96.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
95.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
95.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
95.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
95.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
94.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
94.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
94.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
93.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
93.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
93.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
93.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
92.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
91.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
91.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
91.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
90.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
89.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
88.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
88.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
87.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
86.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
86.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
85.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
85.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
85.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
84.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
84.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
83.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
83.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
82.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
82.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
82.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
82.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
82.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
82.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
82.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
82.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
81.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
81.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
81.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
81.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
80.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
80.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
80.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
80.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
79.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
79.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
79.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
79.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
79.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
79.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
79.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
79.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
78.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
78.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
78.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
78.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
78.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
77.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
77.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
77.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
76.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
76.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
76.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
76.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
76.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
76.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
75.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
75.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
75.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
75.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
75.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
74.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
74.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
74.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
73.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
72.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
72.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
72.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
72.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
72.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
72.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
72.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
72.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
72.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
71.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
71.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
71.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
71.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
70.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
69.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
69.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
69.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
69.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
69.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
69.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
69.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
68.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
68.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
68.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
68.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
68.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
68.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
67.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
67.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
67.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
67.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
67.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
67.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
67.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
67.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
67.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
66.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
66.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
66.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
66.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
66.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
66.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
66.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
66.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
66.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
65.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
65.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
65.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
65.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
65.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
65.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
65.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
65.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
65.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
65.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
64.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
64.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
64.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
63.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
63.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
63.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
63.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
63.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
63.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
63.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
63.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
62.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
62.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
62.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
62.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
62.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
62.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
62.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
61.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
61.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
61.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
61.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
61.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
61.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
61.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
61.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
60.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
60.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
60.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
60.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
60.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
60.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
60.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
60.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
60.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
60.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
60.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
59.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
59.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
59.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
59.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
59.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
59.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
59.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
59.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
58.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
58.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
58.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
58.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
58.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
58.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
58.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
57.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
57.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
57.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
57.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
57.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
57.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
57.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
56.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
56.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
56.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
56.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
56.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
56.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
56.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
56.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
56.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
56.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
56.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
56.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
56.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
55.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
55.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
55.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
55.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
55.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
55.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
54.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
54.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
54.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
54.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
54.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
54.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
54.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
54.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
54.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
54.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
54.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
53.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
53.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
53.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
53.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
53.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
53.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
53.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
52.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
52.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
52.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
52.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
52.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
52.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
52.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
52.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
52.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
52.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
51.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
51.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
51.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
51.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
51.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
51.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
51.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
51.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
51.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
51.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
51.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
51.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
50.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
50.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
50.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
50.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
50.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
50.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
50.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
50.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
50.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
50.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
49.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
49.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
49.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
49.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
48.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
48.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
48.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
48.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
48.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
47.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
47.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
47.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
46.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
46.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
46.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
46.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
46.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
46.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
46.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
46.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
46.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
46.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
46.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
45.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
45.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
45.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
45.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
45.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
45.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
45.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
45.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
45.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
45.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
44.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
44.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
44.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
44.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
44.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
43.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
43.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
43.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
43.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
42.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
42.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
42.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
42.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
42.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
42.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
42.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
42.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
42.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
42.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
41.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
41.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
41.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
41.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
41.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
41.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
41.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
41.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
41.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
41.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
41.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
40.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
40.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
40.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
40.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
40.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
40.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
40.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
40.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
40.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
40.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
39.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
39.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
39.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
39.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
38.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
38.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
38.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
38.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
38.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
38.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
38.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
37.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
37.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
37.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
37.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
37.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
37.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
36.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
36.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
36.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
36.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
35.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
35.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
34.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
34.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
34.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
34.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
34.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
34.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
34.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
34.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
33.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
33.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
33.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
32.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
32.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
32.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
32.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
32.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
32.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
32.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
31.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
31.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
31.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
31.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
31.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
31.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
31.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
31.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
30.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
30.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
30.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
30.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
29.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
29.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
29.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
29.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
29.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
28.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
28.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
28.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
28.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
28.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
28.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
28.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
28.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
28.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
28.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
27.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
27.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
27.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
27.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
26.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
26.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
25.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
25.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
25.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
25.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
25.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
24.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
24.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
24.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
24.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
23.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
23.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
23.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
23.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
23.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
23.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
23.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
23.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
23.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
22.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
22.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
22.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
22.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
21.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
21.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
21.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
20.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
20.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
20.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
19.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
19.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
19.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
19.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
19.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
19.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
18.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
18.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
18.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
17.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
17.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
17.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
15.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
14.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
14.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
13.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
10.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
5.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
3.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
3.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCEA3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
132.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
120.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
115.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
108.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
107.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
100.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
97.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
96.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
95.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
94.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
93.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
92.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
89.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
88.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
86.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
85.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
83.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
82.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
81.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
81.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
79.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
79.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
78.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
78.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
77.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
76.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
74.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
74.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
74.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
73.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
71.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
68.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
68.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
67.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
67.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
66.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
65.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
64.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
64.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
64.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
64.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
64.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
60.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
59.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
59.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
58.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
57.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
56.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
55.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
55.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
53.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
52.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
51.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
51.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
50.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
49.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
49.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
48.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
47.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
46.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
45.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
45.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
45.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
43.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
43.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
43.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
43.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
42.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
42.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
42.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
41.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
41.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
41.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
40.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
40.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
39.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
39.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
39.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
38.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
36.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
36.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
35.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
32.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
31.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
30.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
29.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
29.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
25.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
24.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
23.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
21.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
15.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
12.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCEA3 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
74.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
73.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
72.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
70.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
67.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
66.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
64.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
63.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
61.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
60.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
59.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
57.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
57.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
57.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
56.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
56.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
56.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
55.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
54.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
54.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
54.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
54.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
53.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
52.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
51.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
49.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
49.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
49.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
49.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
48.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
48.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
47.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
46.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
46.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
45.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
45.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
45.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
44.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
44.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
44.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
43.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
43.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
42.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
41.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
41.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
41.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
41.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
41.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
40.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
40.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
40.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
40.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
40.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
39.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
39.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
39.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
39.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
38.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
38.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
38.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
37.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
37.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
37.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
37.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
37.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
37.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
37.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
36.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
36.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
36.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
36.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
35.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
35.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
35.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
35.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
35.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
35.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
35.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
35.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
34.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
34.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
34.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
34.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
34.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
34.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
34.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
34.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
34.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
33.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
33.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
33.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
33.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
33.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
33.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
33.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
33.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
33.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
33.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
33.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
32.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
32.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
32.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
32.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
32.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
32.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
32.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
32.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
32.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
31.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
31.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
31.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
31.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
31.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
31.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
31.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
31.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
31.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
30.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
30.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
30.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
30.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
30.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
30.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
30.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
30.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
30.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
29.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
29.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
29.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
29.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
29.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
29.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
29.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
29.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
28.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
28.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
28.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
28.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
28.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
28.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
28.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
28.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
28.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
27.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
27.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
27.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
27.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
27.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
27.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
27.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
27.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
27.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
27.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
27.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
27.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
27.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
27.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
27.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
26.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
26.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
26.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
26.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
26.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
26.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
26.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
26.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
26.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
26.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
25.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
25.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
25.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
25.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
25.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
25.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
25.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
25.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
25.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
25.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
25.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
24.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
24.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
24.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
24.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
24.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
24.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
24.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
23.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
23.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
23.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
23.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
23.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
22.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
22.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
22.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
22.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
22.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
21.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
21.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
21.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
21.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
21.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
21.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
20.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
20.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
20.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
20.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
20.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
20.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
19.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
19.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
19.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
19.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
19.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
18.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
18.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
18.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
18.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
17.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
17.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
17.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
17.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
17.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
17.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
17.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
15.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
15.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
14.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
14.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
14.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
11.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
11.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
10.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
8.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
2.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
1.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
0.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0077110003
Tumor
1.2
CPT0006440003
Tumor
1.2
CPT0024670003
Tumor
1.1
CPT0009000003
Tumor
0.9
CPT0014370004
Tumor
0.9
CPT0086950003
Tumor
0.8
CPT0086870003
Tumor
0.8
CPT0086820003
Tumor
0.8
CPT0014450004
Tumor
0.7
CPT0088480003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0010160003
Tumor
0.7
CPT0071150004
Tumor
0.7
CPT0077490003
Tumor
0.7
CPT0017410003
Tumor
0.6
CPT0065430003
Tumor
0.6
CPT0078990003
Tumor
0.6
CPT0000780007
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0012900004
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0026410003
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0012640003
Normal
0.6
CPT0025050003
Tumor
0.5
CPT0025110003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0025350003
Tumor
0.5
CPT0079480003
Tumor
0.5
CPT0065810003
Tumor
0.5
CPT0009060003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0000870016
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0088900003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0078830003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0006630003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0086360003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0014350001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0011240003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0000790001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0088640003
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0014470001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0092790003
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0023690003
Tumor
-0.3
CPT0066520001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0007320003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0079380003
Tumor
-0.3
CPT0086970003
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0077310003
Tumor
-0.3
CPT0012920003
Normal
-0.3
CPT0025170003
Tumor
-0.3
CPT0026420001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0006530001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0017850003
Tumor
-0.3
CPT0025290003
Tumor
-0.4
CPT0064400001
Normal
-0.4
CPT0006950001
Normal
-0.4
CPT0000660001
Normal
-0.4
CPT0011410003
Tumor
-0.4
CPT0069010001
Normal
-0.4
CPT0086030003
Tumor
-0.4
CPT0018250001
Normal
-0.4
CPT0065870003
Tumor
-0.4
CPT0012090003
Normal
-0.5
CPT0001190001
Normal
-0.5
CPT0001270001
Normal
-0.5
CPT0020130001
Normal
-0.5
CPT0078800003
Tumor
-0.5
CPT0088710001
Normal
-0.5
CPT0075560003
Tumor
-0.5
CPT0066430001
Normal
-0.5
CPT0075170001
Normal
-0.5
CPT0075570001
Normal
-0.5
CPT0084590001
Normal
-0.5
CPT0076330003
Tumor
-0.5
CPT0089040001
Normal
-0.5
CPT0092190003
Normal
-0.6
CPT0077320001
Normal
-0.6
CPT0066480003
Tumor
-0.6
CPT0065690003
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0014130001
Normal
-0.6
CPT0081880003
Tumor
-0.7
CPT0084560003
Tumor
-0.7
CPT0015730003
Tumor
-0.8
CPT0079180003
Tumor
-1.3
CPT0088550004
Tumor
-1.4
CPT0078660003
Tumor
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.